Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU6-772P-201ENST00000516042 105 ntBASIC-5.02□□□□□ -3.21
VPS13CQ709C8 MIR590-201ENST00000385008 97 ntBASIC-5.02□□□□□ -3.21
VPS13CQ709C8 MTND4LP32-201ENST00000636111 270 ntBASIC-5.02□□□□□ -3.21
VPS13CQ709C8 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-5.03□□□□□ -3.21
VPS13CQ709C8 MIR548BB-201ENST00000626714 66 ntBASIC-5.03□□□□□ -3.21
VPS13CQ709C8 MIR4679-1-201ENST00000637619 75 ntBASIC-5.03□□□□□ -3.22
VPS13CQ709C8 MIR1302-5-201ENST00000408164 150 ntBASIC-5.04□□□□□ -3.22
VPS13CQ709C8 RNU6-483P-201ENST00000384088 108 ntBASIC-5.04□□□□□ -3.22
VPS13CQ709C8 MTND5P22-201ENST00000458380 195 ntBASIC-5.04□□□□□ -3.22
VPS13CQ709C8 RNU6-219P-201ENST00000364728 107 ntBASIC-5.04□□□□□ -3.22
VPS13CQ709C8 SNORA25.4-201ENST00000363666 124 ntBASIC-5.05□□□□□ -3.22
VPS13CQ709C8 MIR3915-201ENST00000578518 97 ntBASIC-5.06□□□□□ -3.22
VPS13CQ709C8 SNORA19-201ENST00000384737 128 ntBASIC-5.06□□□□□ -3.22
VPS13CQ709C8 Y_RNA.276-201ENST00000364732 109 ntBASIC-5.07□□□□□ -3.22
VPS13CQ709C8 RNU4-14P-201ENST00000410858 122 ntBASIC-5.07□□□□□ -3.22
VPS13CQ709C8 RNU6-109P-201ENST00000516364 107 ntBASIC-5.07□□□□□ -3.22
VPS13CQ709C8 RNU6-184P-201ENST00000516514 107 ntBASIC-5.07□□□□□ -3.22
VPS13CQ709C8 RN7SKP298-201ENST00000515950 94 ntBASIC-5.08□□□□□ -3.22
VPS13CQ709C8 MIR4511-201ENST00000582784 87 ntBASIC-5.08□□□□□ -3.22
VPS13CQ709C8 RNU7-197P-201ENST00000458836 62 ntBASIC-5.09□□□□□ -3.22
VPS13CQ709C8 Y_RNA.252-201ENST00000364556 101 ntBASIC-5.09□□□□□ -3.22
VPS13CQ709C8 AC114801.3-201ENST00000510231 177 ntBASIC-5.1□□□□□ -3.23
VPS13CQ709C8 AC113139.1-201ENST00000605049 239 ntBASIC-5.1□□□□□ -3.23
VPS13CQ709C8 RNU7-30P-201ENST00000516835 62 ntBASIC-5.1□□□□□ -3.23
VPS13CQ709C8 RNU6-918P-201ENST00000391219 106 ntBASIC-5.11□□□□□ -3.23
VPS13CQ709C8 RNU6-823P-201ENST00000391042 103 ntBASIC-5.11□□□□□ -3.23
VPS13CQ709C8 SNORA26.8-201ENST00000391306 124 ntBASIC-5.11□□□□□ -3.23
VPS13CQ709C8 RNU6-485P-201ENST00000363475 107 ntBASIC-5.12□□□□□ -3.23
VPS13CQ709C8 SNORD30.1-201ENST00000391309 70 ntBASIC-5.12□□□□□ -3.23
VPS13CQ709C8 Y_RNA.273-201ENST00000364703 102 ntBASIC-5.12□□□□□ -3.23
VPS13CQ709C8 Y_RNA.626-201ENST00000411288 95 ntBASIC-5.12□□□□□ -3.23
VPS13CQ709C8 Y_RNA.635-201ENST00000459041 101 ntBASIC-5.12□□□□□ -3.23
VPS13CQ709C8 SNORA81.3-201ENST00000517283 198 ntBASIC-5.12□□□□□ -3.23
VPS13CQ709C8 SNORD113-6-201ENST00000363345 75 ntBASIC-5.13□□□□□ -3.23
VPS13CQ709C8 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-5.13□□□□□ -3.23
VPS13CQ709C8 SNORD116-29-201ENST00000384516 83 ntBASIC-5.13□□□□□ -3.23
VPS13CQ709C8 AC110620.1-201ENST00000416042 228 ntBASIC-5.14□□□□□ -3.23
VPS13CQ709C8 MIR3134-201ENST00000579433 74 ntBASIC-5.14□□□□□ -3.23
VPS13CQ709C8 MIR1252-201ENST00000408861 65 ntBASIC-5.14□□□□□ -3.23
VPS13CQ709C8 Y_RNA.89-201ENST00000363031 102 ntBASIC-5.15□□□□□ -3.23
VPS13CQ709C8 RNU5A-2P-201ENST00000384337 116 ntBASIC-5.15□□□□□ -3.23
VPS13CQ709C8 Y_RNA.645-201ENST00000391229 102 ntBASIC-5.16□□□□□ -3.24
VPS13CQ709C8 RNU6-675P-201ENST00000384236 104 ntBASIC-5.17□□□□□ -3.24
VPS13CQ709C8 Y_RNA.58-201ENST00000362807 102 ntBASIC-5.18□□□□□ -3.24
VPS13CQ709C8 MTND4P17-201ENST00000470444 350 ntBASIC-5.18□□□□□ -3.24
VPS13CQ709C8 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-5.18□□□□□ -3.24
VPS13CQ709C8 RNU6-446P-201ENST00000362827 106 ntBASIC-5.19□□□□□ -3.24
VPS13CQ709C8 SNORD33.1-201ENST00000516213 88 ntBASIC-5.19□□□□□ -3.24
VPS13CQ709C8 U6.95-201ENST00000636931 70 ntBASIC-5.2□□□□□ -3.24
VPS13CQ709C8 Y_RNA.259-201ENST00000364619 101 ntBASIC-5.21□□□□□ -3.24
VPS13CQ709C8 RNU6-780P-201ENST00000391030 104 ntBASIC-5.21□□□□□ -3.24
VPS13CQ709C8 RNU7-152P-201ENST00000458982 64 ntBASIC-5.21□□□□□ -3.24
VPS13CQ709C8 MIR4509-3-201ENST00000578671 94 ntBASIC-5.22□□□□□ -3.24
VPS13CQ709C8 MIR4509-2-201ENST00000583920 94 ntBASIC-5.22□□□□□ -3.24
VPS13CQ709C8 MIR4509-1-201ENST00000618224 94 ntBASIC-5.22□□□□□ -3.24
VPS13CQ709C8 MIR3914-2-201ENST00000637339 95 ntBASIC-5.22□□□□□ -3.25
VPS13CQ709C8 Y_RNA.26-201ENST00000362539 101 ntBASIC-5.23□□□□□ -3.25
VPS13CQ709C8 Y_RNA.516-201ENST00000384541 124 ntBASIC-5.23□□□□□ -3.25
VPS13CQ709C8 DEFB108C-201ENST00000400154 252 ntBASIC-5.23□□□□□ -3.25
VPS13CQ709C8 SNORD113-4-201ENST00000364802 75 ntBASIC-5.24□□□□□ -3.25
VPS13CQ709C8 RNU6-232P-201ENST00000517144 64 ntBASIC-5.24□□□□□ -3.25
VPS13CQ709C8 AC044792.1-201ENST00000593294 196 ntBASIC-5.25□□□□□ -3.25
VPS13CQ709C8 MIR1245B-201ENST00000636115 69 ntBASIC-5.25□□□□□ -3.25
VPS13CQ709C8 SNORA40.13-201ENST00000516379 120 ntBASIC-5.26□□□□□ -3.25
VPS13CQ709C8 U7.4-201ENST00000614961 63 ntBASIC-5.26□□□□□ -3.25
VPS13CQ709C8 U6.103-201ENST00000637085 61 ntBASIC-5.26□□□□□ -3.25
VPS13CQ709C8 RNU6-133P-201ENST00000383989 107 ntBASIC-5.26□□□□□ -3.25
VPS13CQ709C8 Y_RNA.788-201ENST00000622394 112 ntBASIC-5.26□□□□□ -3.25
VPS13CQ709C8 SNORD116-4-201ENST00000384733 96 ntBASIC-5.27□□□□□ -3.25
VPS13CQ709C8 snoMBII-202.2-201ENST00000517263 86 ntBASIC-5.28□□□□□ -3.25
VPS13CQ709C8 RNU7-125P-201ENST00000458760 62 ntBASIC-5.28□□□□□ -3.26
VPS13CQ709C8 RNU6-1135P-201ENST00000411083 103 ntBASIC-5.3□□□□□ -3.26
VPS13CQ709C8 Y_RNA.573-201ENST00000384763 105 ntBASIC-5.3□□□□□ -3.26
VPS13CQ709C8 RNU4-71P-201ENST00000516258 113 ntBASIC-5.3□□□□□ -3.26
VPS13CQ709C8 SNORD116-21-201ENST00000384507 92 ntBASIC-5.3□□□□□ -3.26
VPS13CQ709C8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-5.31□□□□□ -3.26
VPS13CQ709C8 RNU6-753P-201ENST00000363926 107 ntBASIC-5.31□□□□□ -3.26
VPS13CQ709C8 RNU7-107P-201ENST00000459121 61 ntBASIC-5.31□□□□□ -3.26
VPS13CQ709C8 MT-TL1-201ENST00000386347 75 ntBASIC-5.32□□□□□ -3.26
VPS13CQ709C8 MIR548X2-201ENST00000579776 100 ntBASIC-5.32□□□□□ -3.26
VPS13CQ709C8 RNU6-314P-201ENST00000516574 104 ntBASIC-5.33□□□□□ -3.26
VPS13CQ709C8 Y_RNA.316-201ENST00000365118 111 ntBASIC-5.33□□□□□ -3.26
VPS13CQ709C8 Y_RNA.94-201ENST00000363068 106 ntBASIC-5.34□□□□□ -3.26
VPS13CQ709C8 DLEU2_1.1-201ENST00000612089 120 ntBASIC-5.34□□□□□ -3.26
VPS13CQ709C8 RNU6-539P-201ENST00000516665 103 ntBASIC-5.34□□□□□ -3.26
VPS13CQ709C8 Y_RNA.277-201ENST00000364754 102 ntBASIC-5.35□□□□□ -3.27
VPS13CQ709C8 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-5.35□□□□□ -3.27
VPS13CQ709C8 Y_RNA.579-201ENST00000390939 94 ntBASIC-5.36□□□□□ -3.27
VPS13CQ709C8 RNU6-463P-201ENST00000384340 107 ntBASIC-5.38□□□□□ -3.27
VPS13CQ709C8 MIR3611-201ENST00000584484 83 ntBASIC-5.38□□□□□ -3.27
VPS13CQ709C8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-5.38□□□□□ -3.27
VPS13CQ709C8 MTND4LP9-201ENST00000427694 174 ntBASIC-5.38□□□□□ -3.27
VPS13CQ709C8 AC109635.3-201ENST00000529536 185 ntBASIC-5.39□□□□□ -3.27
VPS13CQ709C8 Y_RNA.545-201ENST00000384652 105 ntBASIC-5.39□□□□□ -3.27
VPS13CQ709C8 RNU6-871P-201ENST00000516122 100 ntBASIC-5.4□□□□□ -3.27
VPS13CQ709C8 RNU6-844P-201ENST00000517175 102 ntBASIC-5.4□□□□□ -3.27
VPS13CQ709C8 SNORA33.2-201ENST00000365413 134 ntBASIC-5.41□□□□□ -3.28
VPS13CQ709C8 Y_RNA.210-201ENST00000364161 110 ntBASIC-5.41□□□□□ -3.28
VPS13CQ709C8 RNU6-829P-201ENST00000363700 112 ntBASIC-5.41□□□□□ -3.28
VPS13CQ709C8 Y_RNA.70-201ENST00000362886 110 ntBASIC-5.42□□□□□ -3.28
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms