Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC006160.2-201ENST00000637708 154 ntBASIC-1.47□□□□□ -2.64
HSPG2P98160 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.47□□□□□ -2.65
HSPG2P98160 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.47□□□□□ -2.65
HSPG2P98160 MIR548X2-201ENST00000579776 100 ntBASIC-1.47□□□□□ -2.65
HSPG2P98160 SNORA19-201ENST00000384737 128 ntBASIC-1.47□□□□□ -2.65
HSPG2P98160 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.48□□□□□ -2.65
HSPG2P98160 MIR1302-1-201ENST00000637932 143 ntBASIC-1.48□□□□□ -2.65
HSPG2P98160 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.48□□□□□ -2.65
HSPG2P98160 MIR1302-5-201ENST00000408164 150 ntBASIC-1.48□□□□□ -2.65
HSPG2P98160 MIR664A-201ENST00000626086 82 ntBASIC-1.48□□□□□ -2.65
HSPG2P98160 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.49□□□□□ -2.65
HSPG2P98160 RNU6-635P-201ENST00000516651 102 ntBASIC-1.49□□□□□ -2.65
HSPG2P98160 MIR3914-2-201ENST00000637339 95 ntBASIC-1.49□□□□□ -2.65
HSPG2P98160 MIR4680-201ENST00000580906 66 ntBASIC-1.49□□□□□ -2.65
HSPG2P98160 AC134503.1-201ENST00000633048 54 ntBASIC-1.49□□□□□ -2.65
HSPG2P98160 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.49□□□□□ -2.65
HSPG2P98160 SNORD116-18-201ENST00000383961 92 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 SNORA25.5-201ENST00000363782 126 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 MIR590-201ENST00000385008 97 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-788P-201ENST00000390967 104 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 MTND4LP9-201ENST00000427694 174 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 MIR124-1-201ENST00000385275 85 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-394P-201ENST00000410735 107 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-109P-201ENST00000516364 107 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-184P-201ENST00000516514 107 ntBASIC-1.5□□□□□ -2.65
HSPG2P98160 RNU6-836P-201ENST00000362920 107 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 RNU6-497P-201ENST00000365316 104 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 AC022559.1-201ENST00000520905 205 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 SNORD116-21-201ENST00000384507 92 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 RNU6-895P-201ENST00000384125 103 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
HSPG2P98160 RNU7-107P-201ENST00000459121 61 ntBASIC-1.51□□□□□ -2.65
HSPG2P98160 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 RNU6-916P-201ENST00000516088 109 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 RNU6-315P-201ENST00000362666 107 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 RNU6-797P-201ENST00000363101 109 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 MIR548X-201ENST00000580069 75 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 MIR4801-201ENST00000582704 82 ntBASIC-1.52□□□□□ -2.65
HSPG2P98160 SNORD45C-201ENST00000383893 79 ntBASIC-1.53□□□□□ -2.65
HSPG2P98160 RNU6-122P-201ENST00000516818 107 ntBASIC-1.53□□□□□ -2.65
HSPG2P98160 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.53□□□□□ -2.65
HSPG2P98160 MT-TD-201ENST00000387419 68 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 MIR548AL-201ENST00000578416 97 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 RNU6-623P-201ENST00000363143 105 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 RNU6-426P-201ENST00000516464 97 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 RNU6-219P-201ENST00000364728 107 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 SNORD33.1-201ENST00000516213 88 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 MIR3128-201ENST00000581957 66 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 MIR4484-201ENST00000582855 83 ntBASIC-1.54□□□□□ -2.66
HSPG2P98160 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 RNU6-474P-201ENST00000384243 107 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 SNORD115.2-201ENST00000391126 59 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 MIR548F1-201ENST00000408667 84 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 RNU6-979P-201ENST00000383896 107 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.55□□□□□ -2.66
HSPG2P98160 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.56□□□□□ -2.66
HSPG2P98160 SNORA40.13-201ENST00000516379 120 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 RNU6-411P-201ENST00000384451 107 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 SNORA20.1-201ENST00000364790 130 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 RNU6-675P-201ENST00000384236 104 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 MIR545-201ENST00000385085 106 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 AC141273.2-201ENST00000618989 130 ntBASIC-1.56□□□□□ -2.66
HSPG2P98160 SNORA40-201ENST00000388090 126 ntBASIC-1.57□□□□□ -2.66
HSPG2P98160 RNU6-804P-201ENST00000384286 107 ntBASIC-1.57□□□□□ -2.66
HSPG2P98160 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.57□□□□□ -2.66
HSPG2P98160 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.57□□□□□ -2.66
HSPG2P98160 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.57□□□□□ -2.66
HSPG2P98160 MIR548H4-201ENST00000408689 111 ntBASIC-1.58□□□□□ -2.66
HSPG2P98160 RNU6-255P-201ENST00000516957 105 ntBASIC-1.58□□□□□ -2.66
HSPG2P98160 AL353621.2-201ENST00000605340 133 ntBASIC-1.58□□□□□ -2.66
HSPG2P98160 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.58□□□□□ -2.66
HSPG2P98160 MIR548BB-201ENST00000626714 66 ntBASIC-1.58□□□□□ -2.66
HSPG2P98160 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 RNU6-634P-201ENST00000459134 106 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 RNU7-120P-201ENST00000459334 63 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 MTND3P3-201ENST00000505004 126 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 MIR548AH-201ENST00000637109 76 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 MIR3171-201ENST00000584270 74 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 AL031737.1-201ENST00000450125 223 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 MIR3938-201ENST00000582157 103 ntBASIC-1.59□□□□□ -2.66
HSPG2P98160 RNU6-663P-201ENST00000391105 106 ntBASIC-1.6□□□□□ -2.67
HSPG2P98160 RNU6-687P-201ENST00000516443 89 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms