Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 SNORD42.2-201ENST00000365570 69 ntBASIC-2.58□□□□□ -2.82
PRKDCP78527 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.58□□□□□ -2.82
PRKDCP78527 AC069439.1-201ENST00000494739 167 ntBASIC-2.58□□□□□ -2.82
PRKDCP78527 RNU6-876P-201ENST00000391295 104 ntBASIC-2.58□□□□□ -2.82
PRKDCP78527 MIR548AI-201ENST00000579940 88 ntBASIC-2.58□□□□□ -2.82
PRKDCP78527 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.59□□□□□ -2.82
PRKDCP78527 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.59□□□□□ -2.82
PRKDCP78527 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.59□□□□□ -2.82
PRKDCP78527 SNORA25.5-201ENST00000363782 126 ntBASIC-2.59□□□□□ -2.82
PRKDCP78527 SNORA81.3-201ENST00000517283 198 ntBASIC-2.59□□□□□ -2.82
PRKDCP78527 RNU7-197P-201ENST00000458836 62 ntBASIC-2.59□□□□□ -2.82
PRKDCP78527 SNORA33.2-201ENST00000365413 134 ntBASIC-2.6□□□□□ -2.83
PRKDCP78527 SNORD116-18-201ENST00000383961 92 ntBASIC-2.6□□□□□ -2.83
PRKDCP78527 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.6□□□□□ -2.83
PRKDCP78527 U6.95-201ENST00000636931 70 ntBASIC-2.6□□□□□ -2.83
PRKDCP78527 RNU6-836P-201ENST00000362920 107 ntBASIC-2.61□□□□□ -2.83
PRKDCP78527 RNU6-574P-201ENST00000384265 107 ntBASIC-2.61□□□□□ -2.83
PRKDCP78527 RNU6-895P-201ENST00000384125 103 ntBASIC-2.61□□□□□ -2.83
PRKDCP78527 MIR1302-5-201ENST00000408164 150 ntBASIC-2.62□□□□□ -2.83
PRKDCP78527 SNORD115.2-201ENST00000391126 59 ntBASIC-2.63□□□□□ -2.83
PRKDCP78527 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.63□□□□□ -2.83
PRKDCP78527 RNU6-109P-201ENST00000516364 107 ntBASIC-2.63□□□□□ -2.83
PRKDCP78527 RNU6-184P-201ENST00000516514 107 ntBASIC-2.63□□□□□ -2.83
PRKDCP78527 U6atac.1-201ENST00000616025 117 ntBASIC-2.63□□□□□ -2.83
PRKDCP78527 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.63□□□□□ -2.83
PRKDCP78527 SNORA40.16-201ENST00000517238 121 ntBASIC-2.64□□□□□ -2.83
PRKDCP78527 MIR548AL-201ENST00000578416 97 ntBASIC-2.64□□□□□ -2.83
PRKDCP78527 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.64□□□□□ -2.83
PRKDCP78527 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.64□□□□□ -2.83
PRKDCP78527 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.64□□□□□ -2.83
PRKDCP78527 MT-TD-201ENST00000387419 68 ntBASIC-2.64□□□□□ -2.83
PRKDCP78527 MIR1302-1-201ENST00000637932 143 ntBASIC-2.64□□□□□ -2.83
PRKDCP78527 MIR664A-201ENST00000626086 82 ntBASIC-2.65□□□□□ -2.83
PRKDCP78527 AC134503.1-201ENST00000633048 54 ntBASIC-2.65□□□□□ -2.83
PRKDCP78527 RNU6-1020P-201ENST00000363684 107 ntBASIC-2.65□□□□□ -2.83
PRKDCP78527 RNU2-16P-201ENST00000410712 136 ntBASIC-2.65□□□□□ -2.83
PRKDCP78527 MTND4LP9-201ENST00000427694 174 ntBASIC-2.65□□□□□ -2.83
PRKDCP78527 MIR548X-201ENST00000580069 75 ntBASIC-2.65□□□□□ -2.83
PRKDCP78527 MIR3914-2-201ENST00000637339 95 ntBASIC-2.65□□□□□ -2.83
PRKDCP78527 RNU4-85P-201ENST00000364675 123 ntBASIC-2.66□□□□□ -2.83
PRKDCP78527 SNORA19-201ENST00000384737 128 ntBASIC-2.66□□□□□ -2.83
PRKDCP78527 RNU7-107P-201ENST00000459121 61 ntBASIC-2.66□□□□□ -2.84
PRKDCP78527 MIR590-201ENST00000385008 97 ntBASIC-2.66□□□□□ -2.84
PRKDCP78527 MIR548X2-201ENST00000579776 100 ntBASIC-2.66□□□□□ -2.84
PRKDCP78527 AC139792.2-201ENST00000624218 587 ntBASIC-2.67□□□□□ -2.84
PRKDCP78527 SNORD116-21-201ENST00000384507 92 ntBASIC-2.67□□□□□ -2.84
PRKDCP78527 MIR4680-201ENST00000580906 66 ntBASIC-2.67□□□□□ -2.84
PRKDCP78527 SNORD45C-201ENST00000383893 79 ntBASIC-2.67□□□□□ -2.84
PRKDCP78527 Y_RNA.574-201ENST00000384766 95 ntBASIC-2.67□□□□□ -2.84
PRKDCP78527 MIR548AH-201ENST00000637109 76 ntBASIC-2.67□□□□□ -2.84
PRKDCP78527 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.68□□□□□ -2.84
PRKDCP78527 Y_RNA.431-201ENST00000384086 102 ntBASIC-2.68□□□□□ -2.84
PRKDCP78527 RNU6-426P-201ENST00000516464 97 ntBASIC-2.68□□□□□ -2.84
PRKDCP78527 SNORD116-24-201ENST00000384549 92 ntBASIC-2.69□□□□□ -2.84
PRKDCP78527 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.69□□□□□ -2.84
PRKDCP78527 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.69□□□□□ -2.84
PRKDCP78527 SNORA40.13-201ENST00000516379 120 ntBASIC-2.69□□□□□ -2.84
PRKDCP78527 AL117187.1-201ENST00000555482 181 ntBASIC-2.69□□□□□ -2.84
PRKDCP78527 RNU6-315P-201ENST00000362666 107 ntBASIC-2.7□□□□□ -2.84
PRKDCP78527 RNU6-255P-201ENST00000516957 105 ntBASIC-2.7□□□□□ -2.84
PRKDCP78527 RNU6-979P-201ENST00000383896 107 ntBASIC-2.7□□□□□ -2.84
PRKDCP78527 RNU6-1137P-201ENST00000517073 99 ntBASIC-2.7□□□□□ -2.84
PRKDCP78527 Y_RNA.580-201ENST00000391004 95 ntBASIC-2.71□□□□□ -2.84
PRKDCP78527 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.71□□□□□ -2.84
PRKDCP78527 MIR4801-201ENST00000582704 82 ntBASIC-2.71□□□□□ -2.84
PRKDCP78527 MIR545-201ENST00000385085 106 ntBASIC-2.71□□□□□ -2.84
PRKDCP78527 RNU6-394P-201ENST00000410735 107 ntBASIC-2.72□□□□□ -2.84
PRKDCP78527 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.72□□□□□ -2.84
PRKDCP78527 MIR3128-201ENST00000581957 66 ntBASIC-2.72□□□□□ -2.84
PRKDCP78527 SNORD33.1-201ENST00000516213 88 ntBASIC-2.73□□□□□ -2.85
PRKDCP78527 SNORA20.1-201ENST00000364790 130 ntBASIC-2.73□□□□□ -2.85
PRKDCP78527 AC022559.1-201ENST00000520905 205 ntBASIC-2.73□□□□□ -2.85
PRKDCP78527 RNU6-1023P-201ENST00000516137 106 ntBASIC-2.73□□□□□ -2.85
PRKDCP78527 AL353621.2-201ENST00000605340 133 ntBASIC-2.74□□□□□ -2.85
PRKDCP78527 Y_RNA.460-201ENST00000384255 102 ntBASIC-2.75□□□□□ -2.85
PRKDCP78527 MIR4484-201ENST00000582855 83 ntBASIC-2.75□□□□□ -2.85
PRKDCP78527 RNU6-623P-201ENST00000363143 105 ntBASIC-2.76□□□□□ -2.85
PRKDCP78527 MIR3938-201ENST00000582157 103 ntBASIC-2.76□□□□□ -2.85
PRKDCP78527 MIR4679-1-201ENST00000637619 75 ntBASIC-2.76□□□□□ -2.85
PRKDCP78527 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.77□□□□□ -2.85
PRKDCP78527 RNU6-411P-201ENST00000384451 107 ntBASIC-2.77□□□□□ -2.85
PRKDCP78527 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.77□□□□□ -2.85
PRKDCP78527 RNU6-797P-201ENST00000363101 109 ntBASIC-2.77□□□□□ -2.85
PRKDCP78527 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.78□□□□□ -2.85
PRKDCP78527 AL031737.1-201ENST00000450125 223 ntBASIC-2.78□□□□□ -2.85
PRKDCP78527 RNU6-474P-201ENST00000384243 107 ntBASIC-2.78□□□□□ -2.85
PRKDCP78527 SNORA40-201ENST00000388090 126 ntBASIC-2.78□□□□□ -2.85
PRKDCP78527 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.78□□□□□ -2.85
PRKDCP78527 MIR548F1-201ENST00000408667 84 ntBASIC-2.79□□□□□ -2.86
PRKDCP78527 RNU6-675P-201ENST00000384236 104 ntBASIC-2.79□□□□□ -2.86
PRKDCP78527 Y_RNA.297-201ENST00000364950 91 ntBASIC-2.79□□□□□ -2.86
PRKDCP78527 RNU6-497P-201ENST00000365316 104 ntBASIC-2.8□□□□□ -2.86
PRKDCP78527 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.8□□□□□ -2.86
PRKDCP78527 Y_RNA.619-201ENST00000410951 90 ntBASIC-2.8□□□□□ -2.86
PRKDCP78527 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.8□□□□□ -2.86
PRKDCP78527 RNU6-663P-201ENST00000391105 106 ntBASIC-2.81□□□□□ -2.86
PRKDCP78527 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.81□□□□□ -2.86
PRKDCP78527 RNU6-379P-201ENST00000363813 104 ntBASIC-2.81□□□□□ -2.86
PRKDCP78527 MTND3P3-201ENST00000505004 126 ntBASIC-2.81□□□□□ -2.86
PRKDCP78527 Y_RNA.720-201ENST00000517166 92 ntBASIC-2.81□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 439.5 ms