Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RNU6-956P-201ENST00000458868 103 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 MTATP8P1-201ENST00000467115 207 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 SNORA40.13-201ENST00000516379 120 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 RNU6-255P-201ENST00000516957 105 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 MIR3938-201ENST00000582157 103 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 RNU6-275P-201ENST00000364910 107 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 AC134503.1-201ENST00000633048 54 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 RNU4-85P-201ENST00000364675 123 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 MIR4666B-201ENST00000578142 81 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 MIR548AL-201ENST00000578416 97 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 AC062037.1-201ENST00000605302 128 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 RNU6-315P-201ENST00000362666 107 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 MIR1277-201ENST00000408536 78 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 RNU6-231P-201ENST00000517122 103 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 RNU6-176P-201ENST00000517196 105 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 MIR548X-201ENST00000580069 75 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 RPS29P30-201ENST00000600975 111 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 AC141273.2-201ENST00000618989 130 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 MIR1297-201ENST00000637311 77 ntBASIC-1.2□□□□□ -2.6
ABCA4P78363 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.21□□□□□ -2.6
ABCA4P78363 MIR620-201ENST00000385232 95 ntBASIC-1.21□□□□□ -2.6
ABCA4P78363 MTND4LP9-201ENST00000427694 174 ntBASIC-1.21□□□□□ -2.6
ABCA4P78363 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.21□□□□□ -2.6
ABCA4P78363 RNA5SP215-201ENST00000363440 122 ntBASIC-1.22□□□□□ -2.6
ABCA4P78363 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.22□□□□□ -2.6
ABCA4P78363 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.22□□□□□ -2.6
ABCA4P78363 SNORD37.2-201ENST00000391075 66 ntBASIC-1.22□□□□□ -2.6
ABCA4P78363 RNU6-887P-201ENST00000410660 100 ntBASIC-1.22□□□□□ -2.6
ABCA4P78363 RNU7-119P-201ENST00000459279 63 ntBASIC-1.22□□□□□ -2.6
ABCA4P78363 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.22□□□□□ -2.6
ABCA4P78363 MIR3171-201ENST00000584270 74 ntBASIC-1.22□□□□□ -2.6
ABCA4P78363 AP001340.1-201ENST00000624405 217 ntBASIC-1.22□□□□□ -2.6
ABCA4P78363 MIR1302-1-201ENST00000637932 143 ntBASIC-1.22□□□□□ -2.6
ABCA4P78363 RNU6-915P-201ENST00000364943 103 ntBASIC-1.22□□□□□ -2.61
ABCA4P78363 RNU6-867P-201ENST00000364956 107 ntBASIC-1.22□□□□□ -2.61
ABCA4P78363 RNU6-675P-201ENST00000384236 104 ntBASIC-1.22□□□□□ -2.61
ABCA4P78363 RNU6-713P-201ENST00000384761 107 ntBASIC-1.22□□□□□ -2.61
ABCA4P78363 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.22□□□□□ -2.61
ABCA4P78363 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.22□□□□□ -2.61
ABCA4P78363 MTND5P41-201ENST00000517498 206 ntBASIC-1.22□□□□□ -2.61
ABCA4P78363 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.23□□□□□ -2.61
ABCA4P78363 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.23□□□□□ -2.61
ABCA4P78363 MT-TL1-201ENST00000386347 75 ntBASIC-1.23□□□□□ -2.61
ABCA4P78363 RNU6-402P-201ENST00000410678 103 ntBASIC-1.23□□□□□ -2.61
ABCA4P78363 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.23□□□□□ -2.61
ABCA4P78363 RNU6-506P-201ENST00000516553 94 ntBASIC-1.23□□□□□ -2.61
ABCA4P78363 U6.95-201ENST00000636931 70 ntBASIC-1.23□□□□□ -2.61
ABCA4P78363 MIR450A1-201ENST00000362262 91 ntBASIC-1.23□□□□□ -2.61
ABCA4P78363 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.23□□□□□ -2.61
ABCA4P78363 AC093729.1-201ENST00000513074 128 ntBASIC-1.23□□□□□ -2.61
ABCA4P78363 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.24□□□□□ -2.61
ABCA4P78363 SNORD116-24-201ENST00000384549 92 ntBASIC-1.24□□□□□ -2.61
ABCA4P78363 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
ABCA4P78363 RNU6-986P-201ENST00000363133 102 ntBASIC-1.24□□□□□ -2.61
ABCA4P78363 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.24□□□□□ -2.61
ABCA4P78363 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.24□□□□□ -2.61
ABCA4P78363 MIR548X2-201ENST00000579776 100 ntBASIC-1.24□□□□□ -2.61
ABCA4P78363 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.25□□□□□ -2.61
ABCA4P78363 MIR4801-201ENST00000582704 82 ntBASIC-1.25□□□□□ -2.61
ABCA4P78363 MIR4760-201ENST00000585040 80 ntBASIC-1.25□□□□□ -2.61
ABCA4P78363 SNORA25.4-201ENST00000363666 124 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 RNU6-294P-201ENST00000364999 102 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 RNU6-895P-201ENST00000384125 103 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 RNU6-474P-201ENST00000384243 107 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 SNORD116-22-201ENST00000384430 92 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 RNU7-171P-201ENST00000459581 62 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 AC139453.2-201ENST00000487255 133 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 RNU6-111P-201ENST00000517179 105 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 AC004792.1-201ENST00000614523 137 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 RNU4-33P-201ENST00000364316 85 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 AL158147.1-201ENST00000443970 75 ntBASIC-1.26□□□□□ -2.61
ABCA4P78363 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.27□□□□□ -2.61
ABCA4P78363 MIR5588-201ENST00000581890 63 ntBASIC-1.27□□□□□ -2.61
ABCA4P78363 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.27□□□□□ -2.61
ABCA4P78363 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.27□□□□□ -2.61
ABCA4P78363 SNORD113-1-201ENST00000365321 69 ntBASIC-1.27□□□□□ -2.61
ABCA4P78363 RNU6-422P-201ENST00000384632 107 ntBASIC-1.27□□□□□ -2.61
ABCA4P78363 MIR548F1-201ENST00000408667 84 ntBASIC-1.27□□□□□ -2.61
ABCA4P78363 U4.5-201ENST00000617137 123 ntBASIC-1.27□□□□□ -2.61
ABCA4P78363 RNU6-776P-201ENST00000364403 104 ntBASIC-1.28□□□□□ -2.61
ABCA4P78363 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.28□□□□□ -2.61
ABCA4P78363 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.28□□□□□ -2.61
ABCA4P78363 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.28□□□□□ -2.61
ABCA4P78363 RNU6-209P-201ENST00000384118 107 ntBASIC-1.28□□□□□ -2.61
ABCA4P78363 RNU6-959P-201ENST00000384671 107 ntBASIC-1.28□□□□□ -2.61
ABCA4P78363 RNU7-200P-201ENST00000516105 62 ntBASIC-1.28□□□□□ -2.61
ABCA4P78363 MIR3128-201ENST00000581957 66 ntBASIC-1.28□□□□□ -2.61
ABCA4P78363 SNORA63.4-201ENST00000362763 126 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 272.2 ms