Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6-787P-201ENST00000384032 107 ntBASIC-1.71□□□□□ -2.68
NEK3P51956 MIR630-201ENST00000384957 97 ntBASIC-1.71□□□□□ -2.68
NEK3P51956 MIR3170-201ENST00000582699 77 ntBASIC-1.71□□□□□ -2.68
NEK3P51956 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.72□□□□□ -2.68
NEK3P51956 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.72□□□□□ -2.68
NEK3P51956 MIR548AM-201ENST00000584298 74 ntBASIC-1.72□□□□□ -2.68
NEK3P51956 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.73□□□□□ -2.69
NEK3P51956 RNU6-841P-201ENST00000383872 107 ntBASIC-1.73□□□□□ -2.69
NEK3P51956 RNU6-411P-201ENST00000384451 107 ntBASIC-1.73□□□□□ -2.69
NEK3P51956 MIR23C-201ENST00000579846 100 ntBASIC-1.73□□□□□ -2.69
NEK3P51956 U7.4-201ENST00000614961 63 ntBASIC-1.73□□□□□ -2.69
NEK3P51956 MIR664B-201ENST00000626756 61 ntBASIC-1.73□□□□□ -2.69
NEK3P51956 MIR3134-201ENST00000579433 74 ntBASIC-1.74□□□□□ -2.69
NEK3P51956 MIR365A-201ENST00000362260 87 ntBASIC-1.75□□□□□ -2.69
NEK3P51956 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.75□□□□□ -2.69
NEK3P51956 MIR4441-201ENST00000582623 100 ntBASIC-1.75□□□□□ -2.69
NEK3P51956 AC013734.1-201ENST00000619329 111 ntBASIC-1.75□□□□□ -2.69
NEK3P51956 RNU4-88P-201ENST00000411220 86 ntBASIC-1.76□□□□□ -2.69
NEK3P51956 RNU6-687P-201ENST00000516443 89 ntBASIC-1.76□□□□□ -2.69
NEK3P51956 SNORD116-16-201ENST00000384533 92 ntBASIC-1.77□□□□□ -2.69
NEK3P51956 RNU6-980P-201ENST00000516925 103 ntBASIC-1.77□□□□□ -2.69
NEK3P51956 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.77□□□□□ -2.69
NEK3P51956 SNORD116-24-201ENST00000384549 92 ntBASIC-1.78□□□□□ -2.69
NEK3P51956 AC005520.4-201ENST00000604337 90 ntBASIC-1.78□□□□□ -2.69
NEK3P51956 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.78□□□□□ -2.69
NEK3P51956 SNORD73B-201ENST00000364394 72 ntBASIC-1.79□□□□□ -2.7
NEK3P51956 SNORD115-31-201ENST00000365318 82 ntBASIC-1.79□□□□□ -2.7
NEK3P51956 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.79□□□□□ -2.7
NEK3P51956 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.79□□□□□ -2.7
NEK3P51956 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.79□□□□□ -2.7
NEK3P51956 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.8□□□□□ -2.7
NEK3P51956 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.8□□□□□ -2.7
NEK3P51956 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.8□□□□□ -2.7
NEK3P51956 SNORA41B-201ENST00000384785 128 ntBASIC-1.81□□□□□ -2.7
NEK3P51956 MIR548AA1-201ENST00000384971 97 ntBASIC-1.81□□□□□ -2.7
NEK3P51956 MIR548W-201ENST00000581970 74 ntBASIC-1.81□□□□□ -2.7
NEK3P51956 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.82□□□□□ -2.7
NEK3P51956 RNU6-542P-201ENST00000516405 103 ntBASIC-1.82□□□□□ -2.7
NEK3P51956 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.83□□□□□ -2.7
NEK3P51956 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.83□□□□□ -2.7
NEK3P51956 SNORA26.2-201ENST00000390922 122 ntBASIC-1.83□□□□□ -2.7
NEK3P51956 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.83□□□□□ -2.7
NEK3P51956 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.83□□□□□ -2.7
NEK3P51956 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.83□□□□□ -2.7
NEK3P51956 U4.2-201ENST00000618561 85 ntBASIC-1.83□□□□□ -2.7
NEK3P51956 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.83□□□□□ -2.7
NEK3P51956 SNORD1B-201ENST00000363091 84 ntBASIC-1.84□□□□□ -2.7
NEK3P51956 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.84□□□□□ -2.7
NEK3P51956 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.84□□□□□ -2.7
NEK3P51956 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.84□□□□□ -2.7
NEK3P51956 U6.97-201ENST00000636904 101 ntBASIC-1.84□□□□□ -2.7
NEK3P51956 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.85□□□□□ -2.71
NEK3P51956 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.85□□□□□ -2.71
NEK3P51956 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.85□□□□□ -2.71
NEK3P51956 snoU13.10-201ENST00000459301 103 ntBASIC-1.85□□□□□ -2.71
NEK3P51956 RNU7-151P-201ENST00000516930 53 ntBASIC-1.85□□□□□ -2.71
NEK3P51956 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.85□□□□□ -2.71
NEK3P51956 RNU6-247P-201ENST00000362636 107 ntBASIC-1.86□□□□□ -2.71
NEK3P51956 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.86□□□□□ -2.71
NEK3P51956 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.86□□□□□ -2.71
NEK3P51956 RNU6-974P-201ENST00000384099 108 ntBASIC-1.86□□□□□ -2.71
NEK3P51956 RNA5SP405-201ENST00000363059 114 ntBASIC-1.87□□□□□ -2.71
NEK3P51956 SNORD114-3-201ENST00000364969 75 ntBASIC-1.87□□□□□ -2.71
NEK3P51956 RNU6-669P-201ENST00000365575 107 ntBASIC-1.87□□□□□ -2.71
NEK3P51956 RNY4P29-201ENST00000410801 97 ntBASIC-1.87□□□□□ -2.71
NEK3P51956 RNY3P8-201ENST00000411366 126 ntBASIC-1.87□□□□□ -2.71
NEK3P51956 SNORA27.2-201ENST00000363365 126 ntBASIC-1.88□□□□□ -2.71
NEK3P51956 MIR579-201ENST00000385221 98 ntBASIC-1.88□□□□□ -2.71
NEK3P51956 RNU6-634P-201ENST00000459134 106 ntBASIC-1.88□□□□□ -2.71
NEK3P51956 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.88□□□□□ -2.71
NEK3P51956 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.88□□□□□ -2.71
NEK3P51956 MIR7978-201ENST00000636158 59 ntBASIC-1.88□□□□□ -2.71
NEK3P51956 SNORD63.2-201ENST00000516303 64 ntBASIC-1.89□□□□□ -2.71
NEK3P51956 MIR581-201ENST00000384895 96 ntBASIC-1.9□□□□□ -2.71
NEK3P51956 MIR1302-4-201ENST00000408701 150 ntBASIC-1.91□□□□□ -2.72
NEK3P51956 RNU6-194P-201ENST00000363862 105 ntBASIC-1.92□□□□□ -2.72
NEK3P51956 RNU6-523P-201ENST00000516304 54 ntBASIC-1.92□□□□□ -2.72
NEK3P51956 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.93□□□□□ -2.72
NEK3P51956 MIR125B1-201ENST00000385236 88 ntBASIC-1.93□□□□□ -2.72
NEK3P51956 RNU6-279P-201ENST00000391297 101 ntBASIC-1.93□□□□□ -2.72
NEK3P51956 RNU6-118P-201ENST00000516552 102 ntBASIC-1.93□□□□□ -2.72
NEK3P51956 MIR1207-201ENST00000408249 87 ntBASIC-1.94□□□□□ -2.72
NEK3P51956 MIR3139-201ENST00000579145 76 ntBASIC-1.94□□□□□ -2.72
NEK3P51956 RNU6-172P-201ENST00000411000 93 ntBASIC-1.95□□□□□ -2.72
NEK3P51956 RNU6-871P-201ENST00000516122 100 ntBASIC-1.95□□□□□ -2.72
NEK3P51956 RNU6-995P-201ENST00000391244 107 ntBASIC-1.96□□□□□ -2.72
NEK3P51956 RNU6-857P-201ENST00000515893 110 ntBASIC-1.96□□□□□ -2.72
NEK3P51956 RNU6-92P-201ENST00000605893 104 ntBASIC-1.96□□□□□ -2.72
NEK3P51956 RNY4P27-201ENST00000363341 96 ntBASIC-1.97□□□□□ -2.72
NEK3P51956 MIR4748-201ENST00000578076 82 ntBASIC-1.97□□□□□ -2.72
NEK3P51956 RNU6-573P-201ENST00000383938 106 ntBASIC-1.98□□□□□ -2.73
NEK3P51956 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.98□□□□□ -2.73
NEK3P51956 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.98□□□□□ -2.73
NEK3P51956 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.99□□□□□ -2.73
NEK3P51956 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.99□□□□□ -2.73
NEK3P51956 RNU6-663P-201ENST00000391105 106 ntBASIC-1.99□□□□□ -2.73
NEK3P51956 SNORD18C-201ENST00000362704 69 ntBASIC-2□□□□□ -2.73
NEK3P51956 Y_RNA.545-201ENST00000384652 105 ntBASIC-2□□□□□ -2.73
NEK3P51956 MIR1255A-201ENST00000408338 113 ntBASIC-2□□□□□ -2.73
NEK3P51956 MIR466-201ENST00000580653 84 ntBASIC-2.01□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 232.3 ms