Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.78□□□□□ -2.69
HOXD13P35453 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.79□□□□□ -2.7
HOXD13P35453 RNU6-979P-201ENST00000383896 107 ntBASIC-1.79□□□□□ -2.7
HOXD13P35453 RNY4P30-201ENST00000410216 95 ntBASIC-1.79□□□□□ -2.7
HOXD13P35453 RNA5SP89-201ENST00000410300 108 ntBASIC-1.79□□□□□ -2.7
HOXD13P35453 MIR3170-201ENST00000582699 77 ntBASIC-1.79□□□□□ -2.7
HOXD13P35453 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.8□□□□□ -2.7
HOXD13P35453 SNORA41B-201ENST00000384785 128 ntBASIC-1.8□□□□□ -2.7
HOXD13P35453 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.8□□□□□ -2.7
HOXD13P35453 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.8□□□□□ -2.7
HOXD13P35453 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.8□□□□□ -2.7
HOXD13P35453 U4.2-201ENST00000618561 85 ntBASIC-1.8□□□□□ -2.7
HOXD13P35453 RNY4P27-201ENST00000363341 96 ntBASIC-1.81□□□□□ -2.7
HOXD13P35453 SNORD115-31-201ENST00000365318 82 ntBASIC-1.81□□□□□ -2.7
HOXD13P35453 SNORD1B-201ENST00000363091 84 ntBASIC-1.82□□□□□ -2.7
HOXD13P35453 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.82□□□□□ -2.7
HOXD13P35453 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.82□□□□□ -2.7
HOXD13P35453 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.82□□□□□ -2.7
HOXD13P35453 MIR4712-201ENST00000583750 82 ntBASIC-1.82□□□□□ -2.7
HOXD13P35453 MIR1245B-201ENST00000636115 69 ntBASIC-1.82□□□□□ -2.7
HOXD13P35453 RNU6-242P-201ENST00000384359 107 ntBASIC-1.83□□□□□ -2.7
HOXD13P35453 MIR548W-201ENST00000581970 74 ntBASIC-1.83□□□□□ -2.7
HOXD13P35453 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.83□□□□□ -2.7
HOXD13P35453 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.84□□□□□ -2.7
HOXD13P35453 MT-TM-201ENST00000387377 68 ntBASIC-1.84□□□□□ -2.7
HOXD13P35453 RNU7-171P-201ENST00000459581 62 ntBASIC-1.84□□□□□ -2.7
HOXD13P35453 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.84□□□□□ -2.7
HOXD13P35453 MIR494-201ENST00000349529 81 ntBASIC-1.85□□□□□ -2.71
HOXD13P35453 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.85□□□□□ -2.71
HOXD13P35453 snoU13.10-201ENST00000459301 103 ntBASIC-1.86□□□□□ -2.71
HOXD13P35453 AC013734.1-201ENST00000619329 111 ntBASIC-1.86□□□□□ -2.71
HOXD13P35453 SNORD114-3-201ENST00000364969 75 ntBASIC-1.87□□□□□ -2.71
HOXD13P35453 MIR579-201ENST00000385221 98 ntBASIC-1.87□□□□□ -2.71
HOXD13P35453 MIR496-201ENST00000385226 102 ntBASIC-1.87□□□□□ -2.71
HOXD13P35453 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.87□□□□□ -2.71
HOXD13P35453 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.87□□□□□ -2.71
HOXD13P35453 RNU6-172P-201ENST00000411000 93 ntBASIC-1.88□□□□□ -2.71
HOXD13P35453 RNU7-151P-201ENST00000516930 53 ntBASIC-1.88□□□□□ -2.71
HOXD13P35453 MIR4748-201ENST00000578076 82 ntBASIC-1.88□□□□□ -2.71
HOXD13P35453 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.88□□□□□ -2.71
HOXD13P35453 MIR466-201ENST00000580653 84 ntBASIC-1.89□□□□□ -2.71
HOXD13P35453 SNORD116-24-201ENST00000384549 92 ntBASIC-1.9□□□□□ -2.71
HOXD13P35453 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.9□□□□□ -2.71
HOXD13P35453 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.91□□□□□ -2.72
HOXD13P35453 SNORD63.2-201ENST00000516303 64 ntBASIC-1.91□□□□□ -2.72
HOXD13P35453 MIR4723-201ENST00000585070 81 ntBASIC-1.91□□□□□ -2.72
HOXD13P35453 AC005520.4-201ENST00000604337 90 ntBASIC-1.91□□□□□ -2.72
HOXD13P35453 MIR450A2-201ENST00000385022 100 ntBASIC-1.92□□□□□ -2.72
HOXD13P35453 U2.22-201ENST00000636441 106 ntBASIC-1.92□□□□□ -2.72
HOXD13P35453 RNU6-542P-201ENST00000516405 103 ntBASIC-1.93□□□□□ -2.72
HOXD13P35453 MIR3134-201ENST00000579433 74 ntBASIC-1.93□□□□□ -2.72
HOXD13P35453 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.93□□□□□ -2.72
HOXD13P35453 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.94□□□□□ -2.72
HOXD13P35453 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
HOXD13P35453 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.94□□□□□ -2.72
HOXD13P35453 RNU6-119P-201ENST00000364882 107 ntBASIC-1.95□□□□□ -2.72
HOXD13P35453 RNU6-294P-201ENST00000364999 102 ntBASIC-1.95□□□□□ -2.72
HOXD13P35453 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.95□□□□□ -2.72
HOXD13P35453 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.95□□□□□ -2.72
HOXD13P35453 RNU6-92P-201ENST00000605893 104 ntBASIC-1.95□□□□□ -2.72
HOXD13P35453 FTX_4.1-201ENST00000616291 147 ntBASIC-1.95□□□□□ -2.72
HOXD13P35453 U6.97-201ENST00000636904 101 ntBASIC-1.95□□□□□ -2.72
HOXD13P35453 SNORA27.2-201ENST00000363365 126 ntBASIC-1.96□□□□□ -2.72
HOXD13P35453 RNU6-669P-201ENST00000365575 107 ntBASIC-1.96□□□□□ -2.72
HOXD13P35453 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.97□□□□□ -2.72
HOXD13P35453 RNU6-411P-201ENST00000384451 107 ntBASIC-1.98□□□□□ -2.73
HOXD13P35453 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.98□□□□□ -2.73
HOXD13P35453 RNU6-687P-201ENST00000516443 89 ntBASIC-1.98□□□□□ -2.73
HOXD13P35453 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.98□□□□□ -2.73
HOXD13P35453 MIR4666B-201ENST00000578142 81 ntBASIC-1.98□□□□□ -2.73
HOXD13P35453 MIR7978-201ENST00000636158 59 ntBASIC-1.98□□□□□ -2.73
HOXD13P35453 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.99□□□□□ -2.73
HOXD13P35453 AC097484.2-201ENST00000509147 251 ntBASIC-1.99□□□□□ -2.73
HOXD13P35453 RNU6-153P-201ENST00000364422 104 ntBASIC-2□□□□□ -2.73
HOXD13P35453 RNY3P8-201ENST00000411366 126 ntBASIC-2□□□□□ -2.73
HOXD13P35453 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.01□□□□□ -2.73
HOXD13P35453 MIR581-201ENST00000384895 96 ntBASIC-2.01□□□□□ -2.73
HOXD13P35453 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.02□□□□□ -2.73
HOXD13P35453 SNORD54-201ENST00000459159 67 ntBASIC-2.02□□□□□ -2.73
HOXD13P35453 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.03□□□□□ -2.73
HOXD13P35453 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.03□□□□□ -2.73
HOXD13P35453 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.03□□□□□ -2.73
HOXD13P35453 U7.4-201ENST00000614961 63 ntBASIC-2.03□□□□□ -2.73
HOXD13P35453 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.03□□□□□ -2.73
HOXD13P35453 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.03□□□□□ -2.73
HOXD13P35453 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.03□□□□□ -2.73
HOXD13P35453 MIR125B1-201ENST00000385236 88 ntBASIC-2.04□□□□□ -2.74
HOXD13P35453 RNU6-523P-201ENST00000516304 54 ntBASIC-2.04□□□□□ -2.74
HOXD13P35453 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.04□□□□□ -2.74
HOXD13P35453 MIR7110-201ENST00000612638 86 ntBASIC-2.04□□□□□ -2.74
HOXD13P35453 RNU6-820P-201ENST00000384273 107 ntBASIC-2.05□□□□□ -2.74
HOXD13P35453 MIR1207-201ENST00000408249 87 ntBASIC-2.05□□□□□ -2.74
HOXD13P35453 RNU6-141P-201ENST00000410499 105 ntBASIC-2.05□□□□□ -2.74
HOXD13P35453 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.05□□□□□ -2.74
HOXD13P35453 SNORD60.1-201ENST00000362451 73 ntBASIC-2.06□□□□□ -2.74
HOXD13P35453 SNORD18C-201ENST00000362704 69 ntBASIC-2.06□□□□□ -2.74
HOXD13P35453 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.06□□□□□ -2.74
HOXD13P35453 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.06□□□□□ -2.74
HOXD13P35453 RNU7-160P-201ENST00000516660 62 ntBASIC-2.06□□□□□ -2.74
HOXD13P35453 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.07□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 222.4 ms