Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 MIR4653-201ENST00000585107 83 ntBASIC1.05□□□□□ -2.24
HOXD11P31277 RNU6-1169P-201ENST00000363537 103 ntBASIC1.04□□□□□ -2.24
HOXD11P31277 SNORD75.1-201ENST00000408373 60 ntBASIC1.04□□□□□ -2.24
HOXD11P31277 AC090616.4-201ENST00000448026 115 ntBASIC1.04□□□□□ -2.24
HOXD11P31277 AC090625.1-201ENST00000357130 210 ntBASIC1.03□□□□□ -2.24
HOXD11P31277 RNU7-159P-201ENST00000459284 62 ntBASIC1.03□□□□□ -2.24
HOXD11P31277 MIR655-201ENST00000362159 97 ntBASIC1.02□□□□□ -2.25
HOXD11P31277 RNA5SP266-201ENST00000410273 108 ntBASIC1.02□□□□□ -2.25
HOXD11P31277 RPL39P28-201ENST00000465655 155 ntBASIC1.02□□□□□ -2.25
HOXD11P31277 Y_RNA.457-201ENST00000384237 111 ntBASIC1.01□□□□□ -2.25
HOXD11P31277 Y_RNA.781-201ENST00000620301 103 ntBASIC1.01□□□□□ -2.25
HOXD11P31277 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HOXD11P31277 RNU7-165P-201ENST00000458864 60 ntBASIC0.99□□□□□ -2.25
HOXD11P31277 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
HOXD11P31277 RNU6-912P-201ENST00000363800 104 ntBASIC0.98□□□□□ -2.25
HOXD11P31277 AP000533.3-201ENST00000447704 118 ntBASIC0.98□□□□□ -2.25
HOXD11P31277 RNA5SP63-201ENST00000391225 112 ntBASIC0.97□□□□□ -2.25
HOXD11P31277 RNA5SP66-201ENST00000517178 101 ntBASIC0.97□□□□□ -2.25
HOXD11P31277 MIR4743-201ENST00000584576 69 ntBASIC0.97□□□□□ -2.25
HOXD11P31277 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
HOXD11P31277 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
HOXD11P31277 AC093726.3-201ENST00000637588 150 ntBASIC0.95□□□□□ -2.26
HOXD11P31277 MIR4802-201ENST00000581881 80 ntBASIC0.94□□□□□ -2.26
HOXD11P31277 MIR5087-201ENST00000635826 76 ntBASIC0.94□□□□□ -2.26
HOXD11P31277 SNORD49B-201ENST00000365172 72 ntBASIC0.93□□□□□ -2.26
HOXD11P31277 MIR4698-201ENST00000577795 80 ntBASIC0.93□□□□□ -2.26
HOXD11P31277 SNORA62.5-201ENST00000516634 120 ntBASIC0.92□□□□□ -2.26
HOXD11P31277 MIR3179-1-201ENST00000578940 84 ntBASIC0.92□□□□□ -2.26
HOXD11P31277 MIR3179-2-201ENST00000579107 84 ntBASIC0.92□□□□□ -2.26
HOXD11P31277 MIR3179-3-201ENST00000579566 84 ntBASIC0.92□□□□□ -2.26
HOXD11P31277 MIR3179-4-201ENST00000617599 84 ntBASIC0.92□□□□□ -2.26
HOXD11P31277 RNA5SP347-201ENST00000362445 119 ntBASIC0.91□□□□□ -2.26
HOXD11P31277 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
HOXD11P31277 RNU6-758P-201ENST00000516292 89 ntBASIC0.91□□□□□ -2.26
HOXD11P31277 SNORA32.1-201ENST00000364514 115 ntBASIC0.9□□□□□ -2.27
HOXD11P31277 MIR145-201ENST00000384967 88 ntBASIC0.9□□□□□ -2.27
HOXD11P31277 MIR204-201ENST00000385200 110 ntBASIC0.9□□□□□ -2.27
HOXD11P31277 SNX3P1X-201ENST00000414887 175 ntBASIC0.89□□□□□ -2.27
HOXD11P31277 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.89□□□□□ -2.27
HOXD11P31277 MIR4315-1-201ENST00000636800 73 ntBASIC0.88□□□□□ -2.27
HOXD11P31277 MIR4315-2-201ENST00000640925 73 ntBASIC0.88□□□□□ -2.27
HOXD11P31277 RNU6-46P-201ENST00000383860 107 ntBASIC0.86□□□□□ -2.27
HOXD11P31277 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
HOXD11P31277 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
HOXD11P31277 IGLVI-20-201ENST00000519296 130 ntBASIC0.86□□□□□ -2.27
HOXD11P31277 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.85□□□□□ -2.27
HOXD11P31277 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC0.85□□□□□ -2.27
HOXD11P31277 MIR6835-201ENST00000621552 64 ntBASIC0.85□□□□□ -2.27
HOXD11P31277 RNA5SP368-201ENST00000364298 116 ntBASIC0.84□□□□□ -2.27
HOXD11P31277 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.84□□□□□ -2.27
HOXD11P31277 Y_RNA.189-201ENST00000363959 112 ntBASIC0.83□□□□□ -2.28
HOXD11P31277 SNORA13-201ENST00000458790 133 ntBASIC0.83□□□□□ -2.28
HOXD11P31277 MIR4645-201ENST00000583158 77 ntBASIC0.83□□□□□ -2.28
HOXD11P31277 RNU6-1327P-201ENST00000365302 105 ntBASIC0.82□□□□□ -2.28
HOXD11P31277 MIR656-201ENST00000385224 78 ntBASIC0.82□□□□□ -2.28
HOXD11P31277 MIR4514-201ENST00000581410 57 ntBASIC0.82□□□□□ -2.28
HOXD11P31277 AC023932.2-201ENST00000603176 175 ntBASIC0.81□□□□□ -2.28
HOXD11P31277 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
HOXD11P31277 AC104692.1-201ENST00000472406 90 ntBASIC0.78□□□□□ -2.28
HOXD11P31277 RNA5SP26-201ENST00000362406 119 ntBASIC0.77□□□□□ -2.29
HOXD11P31277 AC018880.2-201ENST00000414265 201 ntBASIC0.77□□□□□ -2.29
HOXD11P31277 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
HOXD11P31277 MIR4263-201ENST00000584745 83 ntBASIC0.75□□□□□ -2.29
HOXD11P31277 RNA5SP214-201ENST00000363378 118 ntBASIC0.74□□□□□ -2.29
HOXD11P31277 Y_RNA.185-201ENST00000363894 100 ntBASIC0.74□□□□□ -2.29
HOXD11P31277 AL590491.3-201ENST00000610731 82 ntBASIC0.73□□□□□ -2.29
HOXD11P31277 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
HOXD11P31277 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
HOXD11P31277 Y_RNA.610-201ENST00000410681 103 ntBASIC0.71□□□□□ -2.3
HOXD11P31277 RNU6-345P-201ENST00000517001 107 ntBASIC0.71□□□□□ -2.3
HOXD11P31277 RNU6-1340P-201ENST00000384438 107 ntBASIC0.7□□□□□ -2.3
HOXD11P31277 SNORD114-5-201ENST00000362928 70 ntBASIC0.69□□□□□ -2.3
HOXD11P31277 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
HOXD11P31277 RNA5SP499-201ENST00000363982 119 ntBASIC0.68□□□□□ -2.3
HOXD11P31277 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
HOXD11P31277 MIR1207-201ENST00000408249 87 ntBASIC0.68□□□□□ -2.3
HOXD11P31277 MIR604-201ENST00000384880 94 ntBASIC0.67□□□□□ -2.3
HOXD11P31277 SNORD95.1-201ENST00000364099 68 ntBASIC0.66□□□□□ -2.3
HOXD11P31277 MIR1254-1-201ENST00000408257 97 ntBASIC0.66□□□□□ -2.3
HOXD11P31277 MIR4493-201ENST00000584016 73 ntBASIC0.66□□□□□ -2.3
HOXD11P31277 RNU6-1324P-201ENST00000384222 107 ntBASIC0.59□□□□□ -2.31
HOXD11P31277 AL500527.2-201ENST00000454105 95 ntBASIC0.59□□□□□ -2.31
HOXD11P31277 SNORD114-9-201ENST00000364370 72 ntBASIC0.57□□□□□ -2.32
HOXD11P31277 RNU6-284P-201ENST00000411105 106 ntBASIC0.57□□□□□ -2.32
HOXD11P31277 AP001180.6-201ENST00000584918 159 ntBASIC0.57□□□□□ -2.32
HOXD11P31277 SNORD114-12-201ENST00000365400 75 ntBASIC0.56□□□□□ -2.32
HOXD11P31277 MIR5190-201ENST00000581537 80 ntBASIC0.56□□□□□ -2.32
HOXD11P31277 MIR6718-201ENST00000616153 80 ntBASIC0.56□□□□□ -2.32
HOXD11P31277 RNU6-620P-201ENST00000384017 96 ntBASIC0.55□□□□□ -2.32
HOXD11P31277 MIR601-201ENST00000385256 79 ntBASIC0.54□□□□□ -2.32
HOXD11P31277 RNA5SP134-201ENST00000516492 96 ntBASIC0.53□□□□□ -2.32
HOXD11P31277 U4.2-201ENST00000618561 85 ntBASIC0.53□□□□□ -2.32
HOXD11P31277 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
HOXD11P31277 SNORD114-31-201ENST00000363219 75 ntBASIC0.51□□□□□ -2.33
HOXD11P31277 Y_RNA.434-201ENST00000384090 100 ntBASIC0.51□□□□□ -2.33
HOXD11P31277 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
HOXD11P31277 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
HOXD11P31277 RPS29P8-201ENST00000445109 171 ntBASIC0.49□□□□□ -2.33
HOXD11P31277 SNORD19B.1-201ENST00000630615 80 ntBASIC0.49□□□□□ -2.33
HOXD11P31277 RNU6-79P-201ENST00000362511 107 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms