Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.11□□□□□ -2.75
USF1P22415 RNY3P8-201ENST00000411366 126 ntBASIC-2.11□□□□□ -2.75
USF1P22415 SNORA40.13-201ENST00000516379 120 ntBASIC-2.11□□□□□ -2.75
USF1P22415 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.12□□□□□ -2.75
USF1P22415 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.12□□□□□ -2.75
USF1P22415 RNU6-380P-201ENST00000410207 107 ntBASIC-2.12□□□□□ -2.75
USF1P22415 AC097484.2-201ENST00000509147 251 ntBASIC-2.12□□□□□ -2.75
USF1P22415 RNU6-315P-201ENST00000362666 107 ntBASIC-2.13□□□□□ -2.75
USF1P22415 MIR488-201ENST00000365739 83 ntBASIC-2.13□□□□□ -2.75
USF1P22415 SNORD116-24-201ENST00000384549 92 ntBASIC-2.13□□□□□ -2.75
USF1P22415 RNU6-974P-201ENST00000384099 108 ntBASIC-2.14□□□□□ -2.75
USF1P22415 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.15□□□□□ -2.75
USF1P22415 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.15□□□□□ -2.75
USF1P22415 RNU6-81P-201ENST00000365608 104 ntBASIC-2.15□□□□□ -2.75
USF1P22415 AC090425.1-201ENST00000610007 140 ntBASIC-2.15□□□□□ -2.75
USF1P22415 MIR581-201ENST00000384895 96 ntBASIC-2.16□□□□□ -2.76
USF1P22415 RNU6-141P-201ENST00000410499 105 ntBASIC-2.16□□□□□ -2.76
USF1P22415 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.16□□□□□ -2.76
USF1P22415 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.16□□□□□ -2.76
USF1P22415 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.16□□□□□ -2.76
USF1P22415 RNU6-844P-201ENST00000517175 102 ntBASIC-2.16□□□□□ -2.76
USF1P22415 RNU6-794P-201ENST00000517261 64 ntBASIC-2.16□□□□□ -2.76
USF1P22415 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.16□□□□□ -2.76
USF1P22415 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.16□□□□□ -2.76
USF1P22415 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.16□□□□□ -2.76
USF1P22415 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.16□□□□□ -2.76
USF1P22415 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.17□□□□□ -2.76
USF1P22415 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.17□□□□□ -2.76
USF1P22415 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.17□□□□□ -2.76
USF1P22415 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.17□□□□□ -2.76
USF1P22415 RNY4P9-201ENST00000363194 97 ntBASIC-2.18□□□□□ -2.76
USF1P22415 RNU6-640P-201ENST00000363693 105 ntBASIC-2.18□□□□□ -2.76
USF1P22415 SNORD18C-201ENST00000362704 69 ntBASIC-2.19□□□□□ -2.76
USF1P22415 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.19□□□□□ -2.76
USF1P22415 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.19□□□□□ -2.76
USF1P22415 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.21□□□□□ -2.76
USF1P22415 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.21□□□□□ -2.76
USF1P22415 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.21□□□□□ -2.76
USF1P22415 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.21□□□□□ -2.76
USF1P22415 RNY4-201ENST00000516507 96 ntBASIC-2.21□□□□□ -2.76
USF1P22415 RNU7-160P-201ENST00000516660 62 ntBASIC-2.21□□□□□ -2.76
USF1P22415 RNU6-789P-201ENST00000517105 102 ntBASIC-2.21□□□□□ -2.76
USF1P22415 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.21□□□□□ -2.76
USF1P22415 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.22□□□□□ -2.76
USF1P22415 RNU6-230P-201ENST00000362457 104 ntBASIC-2.22□□□□□ -2.76
USF1P22415 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.22□□□□□ -2.76
USF1P22415 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.22□□□□□ -2.76
USF1P22415 SNORD113-3-201ENST00000364830 72 ntBASIC-2.23□□□□□ -2.77
USF1P22415 RNU6-520P-201ENST00000384717 104 ntBASIC-2.23□□□□□ -2.77
USF1P22415 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.23□□□□□ -2.77
USF1P22415 RNU6-209P-201ENST00000384118 107 ntBASIC-2.24□□□□□ -2.77
USF1P22415 RNU6-22P-201ENST00000384355 107 ntBASIC-2.24□□□□□ -2.77
USF1P22415 MIR548AI-201ENST00000579940 88 ntBASIC-2.24□□□□□ -2.77
USF1P22415 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.25□□□□□ -2.77
USF1P22415 MIR154-201ENST00000385243 84 ntBASIC-2.25□□□□□ -2.77
USF1P22415 RNU6-542P-201ENST00000516405 103 ntBASIC-2.25□□□□□ -2.77
USF1P22415 MIR5588-201ENST00000581890 63 ntBASIC-2.25□□□□□ -2.77
USF1P22415 RNU6-92P-201ENST00000605893 104 ntBASIC-2.25□□□□□ -2.77
USF1P22415 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.25□□□□□ -2.77
USF1P22415 RNY1P1-201ENST00000364372 112 ntBASIC-2.26□□□□□ -2.77
USF1P22415 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.26□□□□□ -2.77
USF1P22415 RNU6-895P-201ENST00000384125 103 ntBASIC-2.26□□□□□ -2.77
USF1P22415 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.26□□□□□ -2.77
USF1P22415 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.26□□□□□ -2.77
USF1P22415 MIR548N-201ENST00000408742 75 ntBASIC-2.26□□□□□ -2.77
USF1P22415 RNU6-70P-201ENST00000516438 60 ntBASIC-2.26□□□□□ -2.77
USF1P22415 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.26□□□□□ -2.77
USF1P22415 RNU6-828P-201ENST00000364876 107 ntBASIC-2.27□□□□□ -2.77
USF1P22415 RNU6-979P-201ENST00000383896 107 ntBASIC-2.27□□□□□ -2.77
USF1P22415 MIR4712-201ENST00000583750 82 ntBASIC-2.27□□□□□ -2.77
USF1P22415 MIR202-201ENST00000362219 110 ntBASIC-2.28□□□□□ -2.77
USF1P22415 SNORD60.1-201ENST00000362451 73 ntBASIC-2.28□□□□□ -2.77
USF1P22415 SNORD60-201ENST00000383903 83 ntBASIC-2.28□□□□□ -2.77
USF1P22415 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.28□□□□□ -2.77
USF1P22415 MIR7110-201ENST00000612638 86 ntBASIC-2.28□□□□□ -2.77
USF1P22415 RNU6-32P-201ENST00000383948 107 ntBASIC-2.29□□□□□ -2.78
USF1P22415 RNU6-13P-201ENST00000384248 107 ntBASIC-2.29□□□□□ -2.78
USF1P22415 RNU6-649P-201ENST00000384463 107 ntBASIC-2.29□□□□□ -2.78
USF1P22415 RNU6-12P-201ENST00000384604 107 ntBASIC-2.29□□□□□ -2.78
USF1P22415 RNU6-41P-201ENST00000384741 107 ntBASIC-2.29□□□□□ -2.78
USF1P22415 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.29□□□□□ -2.78
USF1P22415 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.3□□□□□ -2.78
USF1P22415 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.3□□□□□ -2.78
USF1P22415 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.3□□□□□ -2.78
USF1P22415 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.3□□□□□ -2.78
USF1P22415 RNU6-231P-201ENST00000517122 103 ntBASIC-2.3□□□□□ -2.78
USF1P22415 RNU6-810P-201ENST00000364001 107 ntBASIC-2.31□□□□□ -2.78
USF1P22415 MIR1245B-201ENST00000636115 69 ntBASIC-2.31□□□□□ -2.78
USF1P22415 RNU6-361P-201ENST00000364454 107 ntBASIC-2.32□□□□□ -2.78
USF1P22415 RNU6-687P-201ENST00000516443 89 ntBASIC-2.32□□□□□ -2.78
USF1P22415 IGLL4P-201ENST00000614590 133 ntBASIC-2.32□□□□□ -2.78
USF1P22415 SNORA17.4-201ENST00000391287 132 ntBASIC-2.33□□□□□ -2.78
USF1P22415 RNU7-171P-201ENST00000459581 62 ntBASIC-2.33□□□□□ -2.78
USF1P22415 RNU6-313P-201ENST00000516317 112 ntBASIC-2.33□□□□□ -2.78
USF1P22415 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.33□□□□□ -2.78
USF1P22415 MIR3134-201ENST00000579433 74 ntBASIC-2.33□□□□□ -2.78
USF1P22415 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.34□□□□□ -2.78
USF1P22415 RNU6-147P-201ENST00000383983 107 ntBASIC-2.35□□□□□ -2.79
USF1P22415 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.36□□□□□ -2.79
USF1P22415 RNU6-912P-201ENST00000363800 104 ntBASIC-2.36□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 334 ms