Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 Y_RNA.206-201ENST00000364136 102 ntBASIC0.2□□□□□ -2.38
THBS1P07996 RNU6-929P-201ENST00000384429 107 ntBASIC0.2□□□□□ -2.38
THBS1P07996 Z95118.1-201ENST00000421372 247 ntBASIC0.19□□□□□ -2.38
THBS1P07996 RNU6-300P-201ENST00000459080 104 ntBASIC0.19□□□□□ -2.38
THBS1P07996 MIR5190-201ENST00000581537 80 ntBASIC0.19□□□□□ -2.38
THBS1P07996 SNORD75.1-201ENST00000408373 60 ntBASIC0.18□□□□□ -2.38
THBS1P07996 RPL35AP4-201ENST00000412007 102 ntBASIC0.18□□□□□ -2.38
THBS1P07996 SNORD22.1-201ENST00000516331 125 ntBASIC0.18□□□□□ -2.38
THBS1P07996 MIR23C-201ENST00000579846 100 ntBASIC0.18□□□□□ -2.38
THBS1P07996 SNORA18.1-201ENST00000363418 128 ntBASIC0.17□□□□□ -2.38
THBS1P07996 RNA5SP368-201ENST00000364298 116 ntBASIC0.17□□□□□ -2.38
THBS1P07996 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
THBS1P07996 SNORA17.4-201ENST00000391287 132 ntBASIC0.17□□□□□ -2.38
THBS1P07996 RNA5SP25-201ENST00000410815 110 ntBASIC0.17□□□□□ -2.38
THBS1P07996 MIR202-201ENST00000362219 110 ntBASIC0.16□□□□□ -2.38
THBS1P07996 SNORD60-201ENST00000383903 83 ntBASIC0.16□□□□□ -2.38
THBS1P07996 MIR204-201ENST00000385200 110 ntBASIC0.16□□□□□ -2.38
THBS1P07996 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
THBS1P07996 RNU6-758P-201ENST00000516292 89 ntBASIC0.16□□□□□ -2.38
THBS1P07996 AL590491.3-201ENST00000610731 82 ntBASIC0.16□□□□□ -2.38
THBS1P07996 RNA5SP331-201ENST00000364986 107 ntBASIC0.15□□□□□ -2.39
THBS1P07996 Y_RNA.345-201ENST00000365384 92 ntBASIC0.15□□□□□ -2.39
THBS1P07996 MIR581-201ENST00000384895 96 ntBASIC0.15□□□□□ -2.39
THBS1P07996 MIR4290-201ENST00000583807 95 ntBASIC0.14□□□□□ -2.39
THBS1P07996 MIR3666-201ENST00000607845 111 ntBASIC0.14□□□□□ -2.39
THBS1P07996 AC013734.1-201ENST00000619329 111 ntBASIC0.14□□□□□ -2.39
THBS1P07996 MIR4768-201ENST00000585270 74 ntBASIC0.13□□□□□ -2.39
THBS1P07996 SNORD114-11-201ENST00000363738 75 ntBASIC0.12□□□□□ -2.39
THBS1P07996 RNU6-563P-201ENST00000364872 108 ntBASIC0.12□□□□□ -2.39
THBS1P07996 SNORD111B-201ENST00000408587 80 ntBASIC0.12□□□□□ -2.39
THBS1P07996 MIR3179-1-201ENST00000578940 84 ntBASIC0.12□□□□□ -2.39
THBS1P07996 MIR3179-2-201ENST00000579107 84 ntBASIC0.12□□□□□ -2.39
THBS1P07996 MIR3179-3-201ENST00000579566 84 ntBASIC0.12□□□□□ -2.39
THBS1P07996 MIR3179-4-201ENST00000617599 84 ntBASIC0.12□□□□□ -2.39
THBS1P07996 SNORD114-15-201ENST00000364687 72 ntBASIC0.11□□□□□ -2.39
THBS1P07996 SNORD114-17-201ENST00000364699 75 ntBASIC0.11□□□□□ -2.39
THBS1P07996 SNORD114-12-201ENST00000365400 75 ntBASIC0.11□□□□□ -2.39
THBS1P07996 RNU6-68P-201ENST00000516576 104 ntBASIC0.11□□□□□ -2.39
THBS1P07996 MIR371B-201ENST00000638082 66 ntBASIC0.11□□□□□ -2.39
THBS1P07996 SNORD114-31-201ENST00000363219 75 ntBASIC0.1□□□□□ -2.39
THBS1P07996 IGLVI-20-201ENST00000519296 130 ntBASIC0.1□□□□□ -2.39
THBS1P07996 MIR4645-201ENST00000583158 77 ntBASIC0.1□□□□□ -2.39
THBS1P07996 AP000533.3-201ENST00000447704 118 ntBASIC0.09□□□□□ -2.4
THBS1P07996 RNA5SP26-201ENST00000362406 119 ntBASIC0.08□□□□□ -2.4
THBS1P07996 Y_RNA.189-201ENST00000363959 112 ntBASIC0.08□□□□□ -2.4
THBS1P07996 Y_RNA.320-201ENST00000365144 102 ntBASIC0.07□□□□□ -2.4
THBS1P07996 AC090616.4-201ENST00000448026 115 ntBASIC0.07□□□□□ -2.4
THBS1P07996 RNA5SP67-201ENST00000516422 131 ntBASIC0.07□□□□□ -2.4
THBS1P07996 MIR4493-201ENST00000584016 73 ntBASIC0.07□□□□□ -2.4
THBS1P07996 AP001180.6-201ENST00000584918 159 ntBASIC0.07□□□□□ -2.4
THBS1P07996 MIR604-201ENST00000384880 94 ntBASIC0.06□□□□□ -2.4
THBS1P07996 MIR507-201ENST00000385234 94 ntBASIC0.06□□□□□ -2.4
THBS1P07996 RNU7-134P-201ENST00000458997 64 ntBASIC0.06□□□□□ -2.4
THBS1P07996 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.06□□□□□ -2.4
THBS1P07996 U6.97-201ENST00000636904 101 ntBASIC0.06□□□□□ -2.4
THBS1P07996 MIR409-201ENST00000362237 79 ntBASIC0.05□□□□□ -2.4
THBS1P07996 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
THBS1P07996 Y_RNA.223-201ENST00000364290 113 ntBASIC0.05□□□□□ -2.4
THBS1P07996 RNU6-485P-201ENST00000363475 107 ntBASIC0.04□□□□□ -2.4
THBS1P07996 MIR548N-201ENST00000408742 75 ntBASIC0.04□□□□□ -2.4
THBS1P07996 Y_RNA.603-201ENST00000410571 108 ntBASIC0.04□□□□□ -2.4
THBS1P07996 SNORD4A-201ENST00000459174 72 ntBASIC0.04□□□□□ -2.4
THBS1P07996 SNORA32.1-201ENST00000364514 115 ntBASIC0.03□□□□□ -2.4
THBS1P07996 Y_RNA.382-201ENST00000365672 114 ntBASIC0.03□□□□□ -2.4
THBS1P07996 AC120024.2-201ENST00000576526 175 ntBASIC0.03□□□□□ -2.4
THBS1P07996 MIR4788-201ENST00000639104 80 ntBASIC0.03□□□□□ -2.4
THBS1P07996 RNU6-431P-201ENST00000383874 107 ntBASIC0.02□□□□□ -2.41
THBS1P07996 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
THBS1P07996 AC021146.6-201ENST00000514659 117 ntBASIC0.02□□□□□ -2.41
THBS1P07996 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
THBS1P07996 MIR4436A-201ENST00000585278 85 ntBASIC0.02□□□□□ -2.41
THBS1P07996 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
THBS1P07996 RNA5SP300-201ENST00000391197 107 ntBASIC0.01□□□□□ -2.41
THBS1P07996 RNA5SP266-201ENST00000410273 108 ntBASIC0.01□□□□□ -2.41
THBS1P07996 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.01□□□□□ -2.41
THBS1P07996 Y_RNA.134-201ENST00000363435 105 ntBASIC0□□□□□ -2.41
THBS1P07996 RNU6-1169P-201ENST00000363537 103 ntBASIC0□□□□□ -2.41
THBS1P07996 Y_RNA.696-201ENST00000516725 107 ntBASIC0□□□□□ -2.41
THBS1P07996 RNU6-79P-201ENST00000362511 107 ntBASIC-0.01□□□□□ -2.41
THBS1P07996 SNORD95.1-201ENST00000364099 68 ntBASIC-0.01□□□□□ -2.41
THBS1P07996 RNU6-695P-201ENST00000391157 104 ntBASIC-0.01□□□□□ -2.41
THBS1P07996 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.01□□□□□ -2.41
THBS1P07996 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.02□□□□□ -2.41
THBS1P07996 SNORD64-201ENST00000386683 67 ntBASIC-0.02□□□□□ -2.41
THBS1P07996 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.02□□□□□ -2.41
THBS1P07996 MIR101-1-201ENST00000362265 75 ntBASIC-0.03□□□□□ -2.41
THBS1P07996 MIR214-201ENST00000385214 110 ntBASIC-0.03□□□□□ -2.41
THBS1P07996 RNU6-894P-201ENST00000517094 105 ntBASIC-0.03□□□□□ -2.41
THBS1P07996 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.03□□□□□ -2.41
THBS1P07996 RNU6-912P-201ENST00000363800 104 ntBASIC-0.04□□□□□ -2.42
THBS1P07996 SNORD115.2-201ENST00000391126 59 ntBASIC-0.04□□□□□ -2.42
THBS1P07996 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.05□□□□□ -2.42
THBS1P07996 MIR147A-201ENST00000385079 72 ntBASIC-0.05□□□□□ -2.42
THBS1P07996 RNA5SP224-201ENST00000365069 126 ntBASIC-0.06□□□□□ -2.42
THBS1P07996 RPS29P8-201ENST00000445109 171 ntBASIC-0.06□□□□□ -2.42
THBS1P07996 AL500527.2-201ENST00000454105 95 ntBASIC-0.06□□□□□ -2.42
THBS1P07996 MIR6818-201ENST00000621576 65 ntBASIC-0.06□□□□□ -2.42
THBS1P07996 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.07□□□□□ -2.42
THBS1P07996 MIR6874-201ENST00000635894 71 ntBASIC-0.07□□□□□ -2.42
THBS1P07996 MIR382-201ENST00000637119 76 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms