Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 U2.18-201ENST00000622185 84 ntBASIC-0.83□□□□□ -2.54
PHF1O43189 SNORD60.1-201ENST00000362451 73 ntBASIC-0.84□□□□□ -2.54
PHF1O43189 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.84□□□□□ -2.54
PHF1O43189 MIR4511-201ENST00000582784 87 ntBASIC-0.84□□□□□ -2.54
PHF1O43189 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.84□□□□□ -2.54
PHF1O43189 RNA5SP26-201ENST00000362406 119 ntBASIC-0.85□□□□□ -2.55
PHF1O43189 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.85□□□□□ -2.55
PHF1O43189 MIR548AA1-201ENST00000384971 97 ntBASIC-0.86□□□□□ -2.55
PHF1O43189 RNA5SP461-201ENST00000516451 104 ntBASIC-0.86□□□□□ -2.55
PHF1O43189 MIR3115-201ENST00000577915 68 ntBASIC-0.86□□□□□ -2.55
PHF1O43189 AC103706.3-201ENST00000636297 85 ntBASIC-0.86□□□□□ -2.55
PHF1O43189 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.87□□□□□ -2.55
PHF1O43189 MIR4441-201ENST00000582623 100 ntBASIC-0.87□□□□□ -2.55
PHF1O43189 MIR4490-201ENST00000582647 84 ntBASIC-0.87□□□□□ -2.55
PHF1O43189 MIR6818-201ENST00000621576 65 ntBASIC-0.87□□□□□ -2.55
PHF1O43189 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.88□□□□□ -2.55
PHF1O43189 SNORA25.5-201ENST00000363782 126 ntBASIC-0.88□□□□□ -2.55
PHF1O43189 MIR8485-201ENST00000401372 91 ntBASIC-0.88□□□□□ -2.55
PHF1O43189 RNU6-122P-201ENST00000516818 107 ntBASIC-0.88□□□□□ -2.55
PHF1O43189 MIR4306-201ENST00000583390 91 ntBASIC-0.89□□□□□ -2.55
PHF1O43189 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.9□□□□□ -2.55
PHF1O43189 RNU6-800P-201ENST00000384473 103 ntBASIC-0.9□□□□□ -2.55
PHF1O43189 MIR520D-201ENST00000385002 87 ntBASIC-0.9□□□□□ -2.55
PHF1O43189 MIR548Q-201ENST00000408404 100 ntBASIC-0.9□□□□□ -2.55
PHF1O43189 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.9□□□□□ -2.55
PHF1O43189 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.91□□□□□ -2.56
PHF1O43189 MIR1285-2-201ENST00000408311 88 ntBASIC-0.91□□□□□ -2.56
PHF1O43189 RNU6-172P-201ENST00000411000 93 ntBASIC-0.91□□□□□ -2.56
PHF1O43189 MIR3170-201ENST00000582699 77 ntBASIC-0.91□□□□□ -2.56
PHF1O43189 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.92□□□□□ -2.56
PHF1O43189 RNU6-608P-201ENST00000383927 104 ntBASIC-0.92□□□□□ -2.56
PHF1O43189 MIR507-201ENST00000385234 94 ntBASIC-0.92□□□□□ -2.56
PHF1O43189 RNU6-638P-201ENST00000516582 104 ntBASIC-0.92□□□□□ -2.56
PHF1O43189 MIR125B1-201ENST00000385236 88 ntBASIC-0.93□□□□□ -2.56
PHF1O43189 RNA5SP180-201ENST00000516181 101 ntBASIC-0.93□□□□□ -2.56
PHF1O43189 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.93□□□□□ -2.56
PHF1O43189 MIR7978-201ENST00000636158 59 ntBASIC-0.93□□□□□ -2.56
PHF1O43189 RNY4P27-201ENST00000363341 96 ntBASIC-0.94□□□□□ -2.56
PHF1O43189 RNU6-669P-201ENST00000365575 107 ntBASIC-0.94□□□□□ -2.56
PHF1O43189 RNU7-151P-201ENST00000516930 53 ntBASIC-0.94□□□□□ -2.56
PHF1O43189 AC114801.3-201ENST00000510231 177 ntBASIC-0.95□□□□□ -2.56
PHF1O43189 RNU6-231P-201ENST00000517122 103 ntBASIC-0.95□□□□□ -2.56
PHF1O43189 AC091912.2-201ENST00000624798 167 ntBASIC-0.95□□□□□ -2.56
PHF1O43189 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.95□□□□□ -2.56
PHF1O43189 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.96□□□□□ -2.56
PHF1O43189 RPL35AP4-201ENST00000412007 102 ntBASIC-0.96□□□□□ -2.56
PHF1O43189 RNU7-160P-201ENST00000516660 62 ntBASIC-0.96□□□□□ -2.56
PHF1O43189 MIR6874-201ENST00000635894 71 ntBASIC-0.96□□□□□ -2.56
PHF1O43189 RNU6-940P-201ENST00000363433 104 ntBASIC-0.97□□□□□ -2.56
PHF1O43189 RNU6-576P-201ENST00000390854 102 ntBASIC-0.97□□□□□ -2.56
PHF1O43189 RNU6-995P-201ENST00000391244 107 ntBASIC-0.97□□□□□ -2.56
PHF1O43189 AC110620.1-201ENST00000416042 228 ntBASIC-0.97□□□□□ -2.56
PHF1O43189 AC090616.4-201ENST00000448026 115 ntBASIC-0.97□□□□□ -2.56
PHF1O43189 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.97□□□□□ -2.56
PHF1O43189 MIR7110-201ENST00000612638 86 ntBASIC-0.97□□□□□ -2.56
PHF1O43189 RNU6-164P-201ENST00000364604 103 ntBASIC-0.98□□□□□ -2.57
PHF1O43189 RNU6-471P-201ENST00000383944 106 ntBASIC-0.98□□□□□ -2.57
PHF1O43189 RNU6-706P-201ENST00000517229 104 ntBASIC-0.99□□□□□ -2.57
PHF1O43189 MIR579-201ENST00000385221 98 ntBASIC-1.01□□□□□ -2.57
PHF1O43189 RNU6-258P-201ENST00000390884 101 ntBASIC-1.01□□□□□ -2.57
PHF1O43189 MIR23C-201ENST00000579846 100 ntBASIC-1.01□□□□□ -2.57
PHF1O43189 MIR6502-201ENST00000617296 76 ntBASIC-1.01□□□□□ -2.57
PHF1O43189 RNU6-247P-201ENST00000362636 107 ntBASIC-1.03□□□□□ -2.57
PHF1O43189 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.03□□□□□ -2.57
PHF1O43189 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.03□□□□□ -2.57
PHF1O43189 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.03□□□□□ -2.57
PHF1O43189 RNU7-119P-201ENST00000459279 63 ntBASIC-1.03□□□□□ -2.57
PHF1O43189 SNORA40.16-201ENST00000517238 121 ntBASIC-1.03□□□□□ -2.57
PHF1O43189 MIR3938-201ENST00000582157 103 ntBASIC-1.03□□□□□ -2.57
PHF1O43189 MIR4520-1-201ENST00000582609 70 ntBASIC-1.03□□□□□ -2.57
PHF1O43189 SNORA40B-201ENST00000385573 128 ntBASIC-1.04□□□□□ -2.58
PHF1O43189 AC138207.3-201ENST00000585289 166 ntBASIC-1.04□□□□□ -2.58
PHF1O43189 SNORA27.2-201ENST00000363365 126 ntBASIC-1.05□□□□□ -2.58
PHF1O43189 RNU6-810P-201ENST00000364001 107 ntBASIC-1.05□□□□□ -2.58
PHF1O43189 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.05□□□□□ -2.58
PHF1O43189 HLA-S-202ENST00000425174 53 ntBASIC-1.05□□□□□ -2.58
PHF1O43189 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.05□□□□□ -2.58
PHF1O43189 MIR5591-201ENST00000578248 65 ntBASIC-1.05□□□□□ -2.58
PHF1O43189 MIR466-201ENST00000580653 84 ntBASIC-1.05□□□□□ -2.58
PHF1O43189 RNU6-520P-201ENST00000384717 104 ntBASIC-1.06□□□□□ -2.58
PHF1O43189 SNORD63.2-201ENST00000516303 64 ntBASIC-1.06□□□□□ -2.58
PHF1O43189 RNU6-79P-201ENST00000362511 107 ntBASIC-1.07□□□□□ -2.58
PHF1O43189 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.07□□□□□ -2.58
PHF1O43189 RNU6-828P-201ENST00000364876 107 ntBASIC-1.07□□□□□ -2.58
PHF1O43189 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.07□□□□□ -2.58
PHF1O43189 SNORD116.2-201ENST00000391251 93 ntBASIC-1.07□□□□□ -2.58
PHF1O43189 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.08□□□□□ -2.58
PHF1O43189 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.09□□□□□ -2.58
PHF1O43189 AC018880.2-201ENST00000414265 201 ntBASIC-1.09□□□□□ -2.58
PHF1O43189 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.09□□□□□ -2.58
PHF1O43189 MIR1246-201ENST00000636535 73 ntBASIC-1.09□□□□□ -2.58
PHF1O43189 RNU6-974P-201ENST00000384099 108 ntBASIC-1.1□□□□□ -2.59
PHF1O43189 MIR4770-201ENST00000579149 58 ntBASIC-1.1□□□□□ -2.59
PHF1O43189 RNU6-226P-201ENST00000363778 107 ntBASIC-1.11□□□□□ -2.59
PHF1O43189 RNU6-590P-201ENST00000365039 107 ntBASIC-1.11□□□□□ -2.59
PHF1O43189 RNA5SP86-201ENST00000390869 98 ntBASIC-1.13□□□□□ -2.59
PHF1O43189 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
PHF1O43189 RNU6-400P-201ENST00000391173 106 ntBASIC-1.14□□□□□ -2.59
PHF1O43189 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.14□□□□□ -2.59
PHF1O43189 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms