Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.14□□□□□ -2.91
LSM1O15116 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.15□□□□□ -2.91
LSM1O15116 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.15□□□□□ -2.91
LSM1O15116 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.15□□□□□ -2.91
LSM1O15116 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.15□□□□□ -2.91
LSM1O15116 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.16□□□□□ -2.92
LSM1O15116 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.17□□□□□ -2.92
LSM1O15116 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.18□□□□□ -2.92
LSM1O15116 RNY3P8-201ENST00000411366 126 ntBASIC-3.18□□□□□ -2.92
LSM1O15116 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.19□□□□□ -2.92
LSM1O15116 RNU6-32P-201ENST00000383948 107 ntBASIC-3.2□□□□□ -2.92
LSM1O15116 RNU6-13P-201ENST00000384248 107 ntBASIC-3.2□□□□□ -2.92
LSM1O15116 RNU6-12P-201ENST00000384604 107 ntBASIC-3.2□□□□□ -2.92
LSM1O15116 RNU6-41P-201ENST00000384741 107 ntBASIC-3.2□□□□□ -2.92
LSM1O15116 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.2□□□□□ -2.92
LSM1O15116 U6.97-201ENST00000636904 101 ntBASIC-3.2□□□□□ -2.92
LSM1O15116 RNA5SP93-201ENST00000362525 114 ntBASIC-3.21□□□□□ -2.92
LSM1O15116 RNU6-974P-201ENST00000384099 108 ntBASIC-3.21□□□□□ -2.92
LSM1O15116 snosnR66.1-201ENST00000391095 99 ntBASIC-3.21□□□□□ -2.92
LSM1O15116 RNU7-160P-201ENST00000516660 62 ntBASIC-3.21□□□□□ -2.92
LSM1O15116 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.22□□□□□ -2.92
LSM1O15116 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.22□□□□□ -2.92
LSM1O15116 RNU6-313P-201ENST00000516317 112 ntBASIC-3.22□□□□□ -2.92
LSM1O15116 RNU6-789P-201ENST00000517105 102 ntBASIC-3.22□□□□□ -2.92
LSM1O15116 MIR5588-201ENST00000581890 63 ntBASIC-3.22□□□□□ -2.92
LSM1O15116 RNU6-979P-201ENST00000383896 107 ntBASIC-3.23□□□□□ -2.93
LSM1O15116 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.24□□□□□ -2.93
LSM1O15116 RNU6-542P-201ENST00000516405 103 ntBASIC-3.24□□□□□ -2.93
LSM1O15116 MIR548W-201ENST00000581970 74 ntBASIC-3.24□□□□□ -2.93
LSM1O15116 SNORD18C-201ENST00000362704 69 ntBASIC-3.25□□□□□ -2.93
LSM1O15116 RNU6-895P-201ENST00000384125 103 ntBASIC-3.25□□□□□ -2.93
LSM1O15116 MIR154-201ENST00000385243 84 ntBASIC-3.25□□□□□ -2.93
LSM1O15116 RNU6-70P-201ENST00000516438 60 ntBASIC-3.25□□□□□ -2.93
LSM1O15116 MIR548AI-201ENST00000579940 88 ntBASIC-3.25□□□□□ -2.93
LSM1O15116 MIR466-201ENST00000580653 84 ntBASIC-3.25□□□□□ -2.93
LSM1O15116 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.26□□□□□ -2.93
LSM1O15116 MIR4712-201ENST00000583750 82 ntBASIC-3.26□□□□□ -2.93
LSM1O15116 RNU6-92P-201ENST00000605893 104 ntBASIC-3.26□□□□□ -2.93
LSM1O15116 SNORD115-31-201ENST00000365318 82 ntBASIC-3.27□□□□□ -2.93
LSM1O15116 MIR4748-201ENST00000578076 82 ntBASIC-3.27□□□□□ -2.93
LSM1O15116 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.28□□□□□ -2.93
LSM1O15116 snoU13.10-201ENST00000459301 103 ntBASIC-3.28□□□□□ -2.93
LSM1O15116 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.29□□□□□ -2.94
LSM1O15116 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.29□□□□□ -2.94
LSM1O15116 IGLL4P-201ENST00000614590 133 ntBASIC-3.29□□□□□ -2.94
LSM1O15116 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.3□□□□□ -2.94
LSM1O15116 RNU6-147P-201ENST00000383983 107 ntBASIC-3.3□□□□□ -2.94
LSM1O15116 RNU7-171P-201ENST00000459581 62 ntBASIC-3.3□□□□□ -2.94
LSM1O15116 MIR1245B-201ENST00000636115 69 ntBASIC-3.3□□□□□ -2.94
LSM1O15116 RNY1P1-201ENST00000364372 112 ntBASIC-3.31□□□□□ -2.94
LSM1O15116 RNU6-520P-201ENST00000384717 104 ntBASIC-3.31□□□□□ -2.94
LSM1O15116 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.32□□□□□ -2.94
LSM1O15116 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.32□□□□□ -2.94
LSM1O15116 RNU6-828P-201ENST00000364876 107 ntBASIC-3.33□□□□□ -2.94
LSM1O15116 MIR581-201ENST00000384895 96 ntBASIC-3.33□□□□□ -2.94
LSM1O15116 MIR7110-201ENST00000612638 86 ntBASIC-3.34□□□□□ -2.94
LSM1O15116 SNORD60.1-201ENST00000362451 73 ntBASIC-3.35□□□□□ -2.95
LSM1O15116 MIR548N-201ENST00000408742 75 ntBASIC-3.35□□□□□ -2.95
LSM1O15116 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.35□□□□□ -2.95
LSM1O15116 RNU6-687P-201ENST00000516443 89 ntBASIC-3.36□□□□□ -2.95
LSM1O15116 SNORD60-201ENST00000383903 83 ntBASIC-3.37□□□□□ -2.95
LSM1O15116 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.37□□□□□ -2.95
LSM1O15116 RNU6-49P-201ENST00000384256 107 ntBASIC-3.38□□□□□ -2.95
LSM1O15116 MIR3134-201ENST00000579433 74 ntBASIC-3.38□□□□□ -2.95
LSM1O15116 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.39□□□□□ -2.95
LSM1O15116 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.39□□□□□ -2.95
LSM1O15116 RNU6-231P-201ENST00000517122 103 ntBASIC-3.39□□□□□ -2.95
LSM1O15116 MIR202-201ENST00000362219 110 ntBASIC-3.41□□□□□ -2.96
LSM1O15116 RNU6-810P-201ENST00000364001 107 ntBASIC-3.41□□□□□ -2.96
LSM1O15116 RNY4P7-201ENST00000364600 96 ntBASIC-3.41□□□□□ -2.96
LSM1O15116 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.41□□□□□ -2.96
LSM1O15116 SNORD113-1-201ENST00000365321 69 ntBASIC-3.41□□□□□ -2.96
LSM1O15116 RNU6-361P-201ENST00000364454 107 ntBASIC-3.42□□□□□ -2.96
LSM1O15116 MIR548M-201ENST00000408260 86 ntBASIC-3.42□□□□□ -2.96
LSM1O15116 RNU6-649P-201ENST00000384463 107 ntBASIC-3.43□□□□□ -2.96
LSM1O15116 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.43□□□□□ -2.96
LSM1O15116 MIR3668-201ENST00000582138 75 ntBASIC-3.44□□□□□ -2.96
LSM1O15116 MIR3910-1-201ENST00000580936 111 ntBASIC-3.45□□□□□ -2.96
LSM1O15116 SNORA17.4-201ENST00000391287 132 ntBASIC-3.46□□□□□ -2.96
LSM1O15116 AC097484.2-201ENST00000509147 251 ntBASIC-3.46□□□□□ -2.96
LSM1O15116 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.47□□□□□ -2.96
LSM1O15116 RNU6-215P-201ENST00000365169 102 ntBASIC-3.48□□□□□ -2.97
LSM1O15116 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.48□□□□□ -2.97
LSM1O15116 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.48□□□□□ -2.97
LSM1O15116 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.49□□□□□ -2.97
LSM1O15116 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.49□□□□□ -2.97
LSM1O15116 SNORA40B-201ENST00000385573 128 ntBASIC-3.49□□□□□ -2.97
LSM1O15116 FTX_4.1-201ENST00000616291 147 ntBASIC-3.49□□□□□ -2.97
LSM1O15116 MIR3671-201ENST00000580455 88 ntBASIC-3.5□□□□□ -2.97
LSM1O15116 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.51□□□□□ -2.97
LSM1O15116 MT-TR-201ENST00000387439 65 ntBASIC-3.51□□□□□ -2.97
LSM1O15116 SNORD116.2-201ENST00000391251 93 ntBASIC-3.51□□□□□ -2.97
LSM1O15116 MIR4666B-201ENST00000578142 81 ntBASIC-3.51□□□□□ -2.97
LSM1O15116 RNU6-411P-201ENST00000384451 107 ntBASIC-3.52□□□□□ -2.97
LSM1O15116 RNU6-919P-201ENST00000516731 104 ntBASIC-3.52□□□□□ -2.97
LSM1O15116 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.53□□□□□ -2.97
LSM1O15116 RNU6-122P-201ENST00000516818 107 ntBASIC-3.54□□□□□ -2.98
LSM1O15116 RNU6-230P-201ENST00000362457 104 ntBASIC-3.55□□□□□ -2.98
LSM1O15116 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.55□□□□□ -2.98
LSM1O15116 SNORA40.16-201ENST00000517238 121 ntBASIC-3.55□□□□□ -2.98
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms