Protein–RNA interactions for Protein: Q9NVE4

CCDC87, Coiled-coil domain-containing protein 87, humanhuman

Predictions only

Length 849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87Q9NVE4 AC114755.3-201ENST00000481111 251 ntBASIC-0.16□□□□□ -2.44
CCDC87Q9NVE4 MIR6851-201ENST00000617060 67 ntBASIC-0.16□□□□□ -2.44
CCDC87Q9NVE4 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.17□□□□□ -2.44
CCDC87Q9NVE4 RNA5SP368-201ENST00000364298 116 ntBASIC-0.17□□□□□ -2.44
CCDC87Q9NVE4 SNORD74.6-201ENST00000364796 70 ntBASIC-0.17□□□□□ -2.44
CCDC87Q9NVE4 MIR604-201ENST00000384880 94 ntBASIC-0.17□□□□□ -2.44
CCDC87Q9NVE4 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.17□□□□□ -2.44
CCDC87Q9NVE4 MIR8068-201ENST00000618032 68 ntBASIC-0.17□□□□□ -2.44
CCDC87Q9NVE4 AC093726.3-201ENST00000637588 150 ntBASIC-0.17□□□□□ -2.44
CCDC87Q9NVE4 SNORA32.1-201ENST00000364514 115 ntBASIC-0.18□□□□□ -2.44
CCDC87Q9NVE4 MIR4645-201ENST00000583158 77 ntBASIC-0.18□□□□□ -2.44
CCDC87Q9NVE4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
CCDC87Q9NVE4 RNU6-231P-201ENST00000517122 103 ntBASIC-0.2□□□□□ -2.44
CCDC87Q9NVE4 RNU6-30P-201ENST00000384561 107 ntBASIC-0.21□□□□□ -2.44
CCDC87Q9NVE4 RNU6-696P-201ENST00000390834 107 ntBASIC-0.21□□□□□ -2.44
CCDC87Q9NVE4 MIR633-201ENST00000384821 98 ntBASIC-0.22□□□□□ -2.44
CCDC87Q9NVE4 MIR124-2-201ENST00000385081 109 ntBASIC-0.22□□□□□ -2.44
CCDC87Q9NVE4 SNORA13-201ENST00000458790 133 ntBASIC-0.22□□□□□ -2.44
CCDC87Q9NVE4 MIR7110-201ENST00000612638 86 ntBASIC-0.22□□□□□ -2.44
CCDC87Q9NVE4 SNORD1B-201ENST00000363091 84 ntBASIC-0.23□□□□□ -2.45
CCDC87Q9NVE4 RNA5SP300-201ENST00000391197 107 ntBASIC-0.23□□□□□ -2.45
CCDC87Q9NVE4 AC079150.2-201ENST00000443733 78 ntBASIC-0.23□□□□□ -2.45
CCDC87Q9NVE4 MIR101-1-201ENST00000362265 75 ntBASIC-0.24□□□□□ -2.45
CCDC87Q9NVE4 MIR518B-201ENST00000385127 83 ntBASIC-0.24□□□□□ -2.45
CCDC87Q9NVE4 U7.5-201ENST00000517224 61 ntBASIC-0.24□□□□□ -2.45
CCDC87Q9NVE4 RNU6-598P-201ENST00000364017 105 ntBASIC-0.25□□□□□ -2.45
CCDC87Q9NVE4 SNORD38.3-201ENST00000516599 73 ntBASIC-0.25□□□□□ -2.45
CCDC87Q9NVE4 MIR4788-201ENST00000639104 80 ntBASIC-0.25□□□□□ -2.45
CCDC87Q9NVE4 SNORD95.1-201ENST00000364099 68 ntBASIC-0.26□□□□□ -2.45
CCDC87Q9NVE4 RNU6-172P-201ENST00000411000 93 ntBASIC-0.26□□□□□ -2.45
CCDC87Q9NVE4 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.26□□□□□ -2.45
CCDC87Q9NVE4 SNORD114-28-201ENST00000363610 72 ntBASIC-0.27□□□□□ -2.45
CCDC87Q9NVE4 SNORD114-11-201ENST00000363738 75 ntBASIC-0.27□□□□□ -2.45
CCDC87Q9NVE4 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.28□□□□□ -2.45
CCDC87Q9NVE4 RNU6-829P-201ENST00000363700 112 ntBASIC-0.29□□□□□ -2.46
CCDC87Q9NVE4 MIR548AA1-201ENST00000384971 97 ntBASIC-0.29□□□□□ -2.46
CCDC87Q9NVE4 MIR204-201ENST00000385200 110 ntBASIC-0.29□□□□□ -2.46
CCDC87Q9NVE4 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.3□□□□□ -2.46
CCDC87Q9NVE4 RNU7-88P-201ENST00000458752 63 ntBASIC-0.3□□□□□ -2.46
CCDC87Q9NVE4 SNORD116.2-201ENST00000391251 93 ntBASIC-0.31□□□□□ -2.46
CCDC87Q9NVE4 RPS29P8-201ENST00000445109 171 ntBASIC-0.31□□□□□ -2.46
CCDC87Q9NVE4 SNORD63.1-201ENST00000516178 80 ntBASIC-0.31□□□□□ -2.46
CCDC87Q9NVE4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.31□□□□□ -2.46
CCDC87Q9NVE4 RNA5SP331-201ENST00000364986 107 ntBASIC-0.32□□□□□ -2.46
CCDC87Q9NVE4 RNA5SP451-201ENST00000410588 110 ntBASIC-0.32□□□□□ -2.46
CCDC87Q9NVE4 SNORD57-201ENST00000448188 72 ntBASIC-0.32□□□□□ -2.46
CCDC87Q9NVE4 SNORD18.2-201ENST00000459604 70 ntBASIC-0.32□□□□□ -2.46
CCDC87Q9NVE4 RNU6-446P-201ENST00000362827 106 ntBASIC-0.33□□□□□ -2.46
CCDC87Q9NVE4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.33□□□□□ -2.46
CCDC87Q9NVE4 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.34□□□□□ -2.46
CCDC87Q9NVE4 RNU6-995P-201ENST00000391244 107 ntBASIC-0.34□□□□□ -2.46
CCDC87Q9NVE4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.34□□□□□ -2.46
CCDC87Q9NVE4 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.34□□□□□ -2.46
CCDC87Q9NVE4 MIR8064-201ENST00000612863 90 ntBASIC-0.34□□□□□ -2.46
CCDC87Q9NVE4 U2.18-201ENST00000622185 84 ntBASIC-0.34□□□□□ -2.46
CCDC87Q9NVE4 RNU6-732P-201ENST00000516033 103 ntBASIC-0.35□□□□□ -2.47
CCDC87Q9NVE4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.35□□□□□ -2.47
CCDC87Q9NVE4 RNU7-160P-201ENST00000516660 62 ntBASIC-0.35□□□□□ -2.47
CCDC87Q9NVE4 SNORA40B-201ENST00000385573 128 ntBASIC-0.36□□□□□ -2.47
CCDC87Q9NVE4 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.36□□□□□ -2.47
CCDC87Q9NVE4 SNORD75.1-201ENST00000408373 60 ntBASIC-0.37□□□□□ -2.47
CCDC87Q9NVE4 RNA5SP67-201ENST00000516422 131 ntBASIC-0.37□□□□□ -2.47
CCDC87Q9NVE4 MIR224-201ENST00000384889 81 ntBASIC-0.39□□□□□ -2.47
CCDC87Q9NVE4 RNU6-320P-201ENST00000516511 106 ntBASIC-0.39□□□□□ -2.47
CCDC87Q9NVE4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.39□□□□□ -2.47
CCDC87Q9NVE4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.39□□□□□ -2.47
CCDC87Q9NVE4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.39□□□□□ -2.47
CCDC87Q9NVE4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.39□□□□□ -2.47
CCDC87Q9NVE4 MIR409-201ENST00000362237 79 ntBASIC-0.4□□□□□ -2.47
CCDC87Q9NVE4 RNU6-810P-201ENST00000364001 107 ntBASIC-0.4□□□□□ -2.47
CCDC87Q9NVE4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.4□□□□□ -2.47
CCDC87Q9NVE4 RNU7-151P-201ENST00000516930 53 ntBASIC-0.4□□□□□ -2.47
CCDC87Q9NVE4 SNORA40.16-201ENST00000517238 121 ntBASIC-0.4□□□□□ -2.47
CCDC87Q9NVE4 MIR196A2-201ENST00000385189 110 ntBASIC-0.41□□□□□ -2.48
CCDC87Q9NVE4 RNU6-614P-201ENST00000384369 107 ntBASIC-0.42□□□□□ -2.48
CCDC87Q9NVE4 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
CCDC87Q9NVE4 AC021146.6-201ENST00000514659 117 ntBASIC-0.42□□□□□ -2.48
CCDC87Q9NVE4 U6.59-201ENST00000615686 107 ntBASIC-0.42□□□□□ -2.48
CCDC87Q9NVE4 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
CCDC87Q9NVE4 MTND4LP19-201ENST00000403051 166 ntBASIC-0.43□□□□□ -2.48
CCDC87Q9NVE4 SNORD115-33-201ENST00000363723 82 ntBASIC-0.44□□□□□ -2.48
CCDC87Q9NVE4 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.44□□□□□ -2.48
CCDC87Q9NVE4 SNORD14C-201ENST00000365382 88 ntBASIC-0.44□□□□□ -2.48
CCDC87Q9NVE4 SNORA26.4-201ENST00000391188 123 ntBASIC-0.44□□□□□ -2.48
CCDC87Q9NVE4 MIR7978-201ENST00000636158 59 ntBASIC-0.45□□□□□ -2.48
CCDC87Q9NVE4 MIR579-201ENST00000385221 98 ntBASIC-0.46□□□□□ -2.48
CCDC87Q9NVE4 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.46□□□□□ -2.48
CCDC87Q9NVE4 MIR4436A-201ENST00000585278 85 ntBASIC-0.46□□□□□ -2.48
CCDC87Q9NVE4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.47□□□□□ -2.48
CCDC87Q9NVE4 AP000533.3-201ENST00000447704 118 ntBASIC-0.47□□□□□ -2.48
CCDC87Q9NVE4 MIR548Q-201ENST00000408404 100 ntBASIC-0.49□□□□□ -2.49
CCDC87Q9NVE4 RNU6-721P-201ENST00000410155 105 ntBASIC-0.49□□□□□ -2.49
CCDC87Q9NVE4 AL353691.2-201ENST00000443795 59 ntBASIC-0.49□□□□□ -2.49
CCDC87Q9NVE4 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.5□□□□□ -2.49
CCDC87Q9NVE4 MIR125B1-201ENST00000385236 88 ntBASIC-0.5□□□□□ -2.49
CCDC87Q9NVE4 RNA5SP266-201ENST00000410273 108 ntBASIC-0.5□□□□□ -2.49
CCDC87Q9NVE4 MIR548AX-201ENST00000580117 73 ntBASIC-0.5□□□□□ -2.49
CCDC87Q9NVE4 MIR4490-201ENST00000582647 84 ntBASIC-0.5□□□□□ -2.49
CCDC87Q9NVE4 SNORD113-4-201ENST00000364802 75 ntBASIC-0.51□□□□□ -2.49
CCDC87Q9NVE4 SNORA32.3-201ENST00000384772 121 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 239.9 ms