Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 RNU6-540P-201ENST00000384622 101 ntBASIC-1.99□□□□□ -2.73
VCX3AQ9NNX9 RNU6-995P-201ENST00000391244 107 ntBASIC-1.99□□□□□ -2.73
VCX3AQ9NNX9 AL031737.1-201ENST00000450125 223 ntBASIC-1.99□□□□□ -2.73
VCX3AQ9NNX9 MIR3133-201ENST00000583157 78 ntBASIC-1.99□□□□□ -2.73
VCX3AQ9NNX9 MIR450A1-201ENST00000362262 91 ntBASIC-2□□□□□ -2.73
VCX3AQ9NNX9 RNU6-228P-201ENST00000362700 106 ntBASIC-2□□□□□ -2.73
VCX3AQ9NNX9 RNU6-1034P-201ENST00000365335 101 ntBASIC-2□□□□□ -2.73
VCX3AQ9NNX9 RNU6-1056P-201ENST00000383996 107 ntBASIC-2□□□□□ -2.73
VCX3AQ9NNX9 MIR1285-2-201ENST00000408311 88 ntBASIC-2□□□□□ -2.73
VCX3AQ9NNX9 AL365222.1-201ENST00000614661 98 ntBASIC-2□□□□□ -2.73
VCX3AQ9NNX9 MTRNR2L9-201ENST00000622562 75 ntBASIC-2□□□□□ -2.73
VCX3AQ9NNX9 MIR198-201ENST00000637333 62 ntBASIC-2□□□□□ -2.73
VCX3AQ9NNX9 SNORD45A-201ENST00000384512 84 ntBASIC-2.01□□□□□ -2.73
VCX3AQ9NNX9 RNU6-380P-201ENST00000410207 107 ntBASIC-2.01□□□□□ -2.73
VCX3AQ9NNX9 RNU6-983P-201ENST00000516004 103 ntBASIC-2.01□□□□□ -2.73
VCX3AQ9NNX9 MIR548AM-201ENST00000584298 74 ntBASIC-2.01□□□□□ -2.73
VCX3AQ9NNX9 AC090425.1-201ENST00000610007 140 ntBASIC-2.01□□□□□ -2.73
VCX3AQ9NNX9 RNU6-834P-201ENST00000362367 110 ntBASIC-2.02□□□□□ -2.73
VCX3AQ9NNX9 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.02□□□□□ -2.73
VCX3AQ9NNX9 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.02□□□□□ -2.73
VCX3AQ9NNX9 RNY4P18-201ENST00000391107 89 ntBASIC-2.02□□□□□ -2.73
VCX3AQ9NNX9 SNX3P1X-201ENST00000414887 175 ntBASIC-2.02□□□□□ -2.73
VCX3AQ9NNX9 RNU7-151P-201ENST00000516930 53 ntBASIC-2.02□□□□□ -2.73
VCX3AQ9NNX9 SNORA63.4-201ENST00000362763 126 ntBASIC-2.03□□□□□ -2.73
VCX3AQ9NNX9 SNORD63.2-201ENST00000516303 64 ntBASIC-2.03□□□□□ -2.73
VCX3AQ9NNX9 SNORA40.13-201ENST00000516379 120 ntBASIC-2.03□□□□□ -2.73
VCX3AQ9NNX9 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.03□□□□□ -2.73
VCX3AQ9NNX9 AP001318.4-201ENST00000616637 121 ntBASIC-2.03□□□□□ -2.73
VCX3AQ9NNX9 AC006160.2-201ENST00000637708 154 ntBASIC-2.03□□□□□ -2.73
VCX3AQ9NNX9 SNORA27.2-201ENST00000363365 126 ntBASIC-2.04□□□□□ -2.74
VCX3AQ9NNX9 RNU6-755P-201ENST00000364400 103 ntBASIC-2.05□□□□□ -2.74
VCX3AQ9NNX9 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.05□□□□□ -2.74
VCX3AQ9NNX9 RNU6-675P-201ENST00000384236 104 ntBASIC-2.05□□□□□ -2.74
VCX3AQ9NNX9 MIR601-201ENST00000385256 79 ntBASIC-2.05□□□□□ -2.74
VCX3AQ9NNX9 RNU6-172P-201ENST00000411000 93 ntBASIC-2.05□□□□□ -2.74
VCX3AQ9NNX9 RNU6-669P-201ENST00000365575 107 ntBASIC-2.06□□□□□ -2.74
VCX3AQ9NNX9 MIR579-201ENST00000385221 98 ntBASIC-2.06□□□□□ -2.74
VCX3AQ9NNX9 MIR4756-201ENST00000577874 78 ntBASIC-2.06□□□□□ -2.74
VCX3AQ9NNX9 AC005520.4-201ENST00000604337 90 ntBASIC-2.06□□□□□ -2.74
VCX3AQ9NNX9 AC013734.1-201ENST00000619329 111 ntBASIC-2.06□□□□□ -2.74
VCX3AQ9NNX9 MIR664A-201ENST00000626086 82 ntBASIC-2.06□□□□□ -2.74
VCX3AQ9NNX9 MIR664B-201ENST00000626756 61 ntBASIC-2.06□□□□□ -2.74
VCX3AQ9NNX9 MIR7978-201ENST00000636158 59 ntBASIC-2.07□□□□□ -2.74
VCX3AQ9NNX9 RNU6-315P-201ENST00000362666 107 ntBASIC-2.08□□□□□ -2.74
VCX3AQ9NNX9 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.09□□□□□ -2.74
VCX3AQ9NNX9 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.09□□□□□ -2.74
VCX3AQ9NNX9 MIR125B1-201ENST00000385236 88 ntBASIC-2.09□□□□□ -2.74
VCX3AQ9NNX9 RNU6-794P-201ENST00000517261 64 ntBASIC-2.09□□□□□ -2.74
VCX3AQ9NNX9 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.09□□□□□ -2.74
VCX3AQ9NNX9 MIR365A-201ENST00000362260 87 ntBASIC-2.1□□□□□ -2.75
VCX3AQ9NNX9 RNU6-81P-201ENST00000365608 104 ntBASIC-2.1□□□□□ -2.75
VCX3AQ9NNX9 MIR488-201ENST00000365739 83 ntBASIC-2.1□□□□□ -2.75
VCX3AQ9NNX9 RNU6-209P-201ENST00000384118 107 ntBASIC-2.1□□□□□ -2.75
VCX3AQ9NNX9 RNU6-523P-201ENST00000516304 54 ntBASIC-2.1□□□□□ -2.75
VCX3AQ9NNX9 RNU6-980P-201ENST00000516925 103 ntBASIC-2.1□□□□□ -2.75
VCX3AQ9NNX9 RNU6-844P-201ENST00000517175 102 ntBASIC-2.1□□□□□ -2.75
VCX3AQ9NNX9 U6.97-201ENST00000636904 101 ntBASIC-2.1□□□□□ -2.75
VCX3AQ9NNX9 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.11□□□□□ -2.75
VCX3AQ9NNX9 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.11□□□□□ -2.75
VCX3AQ9NNX9 RNY3P8-201ENST00000411366 126 ntBASIC-2.11□□□□□ -2.75
VCX3AQ9NNX9 MIR4441-201ENST00000582623 100 ntBASIC-2.11□□□□□ -2.75
VCX3AQ9NNX9 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.11□□□□□ -2.75
VCX3AQ9NNX9 MIR1468-201ENST00000410600 86 ntBASIC-2.12□□□□□ -2.75
VCX3AQ9NNX9 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.13□□□□□ -2.75
VCX3AQ9NNX9 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.13□□□□□ -2.75
VCX3AQ9NNX9 RNU4-88P-201ENST00000411220 86 ntBASIC-2.13□□□□□ -2.75
VCX3AQ9NNX9 RNU6-640P-201ENST00000363693 105 ntBASIC-2.14□□□□□ -2.75
VCX3AQ9NNX9 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.14□□□□□ -2.75
VCX3AQ9NNX9 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.14□□□□□ -2.75
VCX3AQ9NNX9 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.14□□□□□ -2.75
VCX3AQ9NNX9 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.14□□□□□ -2.75
VCX3AQ9NNX9 SNORD116-24-201ENST00000384549 92 ntBASIC-2.15□□□□□ -2.75
VCX3AQ9NNX9 RNU6-789P-201ENST00000517105 102 ntBASIC-2.15□□□□□ -2.75
VCX3AQ9NNX9 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.15□□□□□ -2.75
VCX3AQ9NNX9 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.16□□□□□ -2.76
VCX3AQ9NNX9 RNA5SP331-201ENST00000364986 107 ntBASIC-2.16□□□□□ -2.76
VCX3AQ9NNX9 RNU6-895P-201ENST00000384125 103 ntBASIC-2.16□□□□□ -2.76
VCX3AQ9NNX9 RNU6-22P-201ENST00000384355 107 ntBASIC-2.16□□□□□ -2.76
VCX3AQ9NNX9 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.16□□□□□ -2.76
VCX3AQ9NNX9 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.17□□□□□ -2.76
VCX3AQ9NNX9 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.17□□□□□ -2.76
VCX3AQ9NNX9 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.17□□□□□ -2.76
VCX3AQ9NNX9 MIR154-201ENST00000385243 84 ntBASIC-2.17□□□□□ -2.76
VCX3AQ9NNX9 SNORD18C-201ENST00000362704 69 ntBASIC-2.18□□□□□ -2.76
VCX3AQ9NNX9 RNU6-974P-201ENST00000384099 108 ntBASIC-2.18□□□□□ -2.76
VCX3AQ9NNX9 RNU7-160P-201ENST00000516660 62 ntBASIC-2.18□□□□□ -2.76
VCX3AQ9NNX9 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.19□□□□□ -2.76
VCX3AQ9NNX9 SNORD115-31-201ENST00000365318 82 ntBASIC-2.19□□□□□ -2.76
VCX3AQ9NNX9 RNU6-32P-201ENST00000383948 107 ntBASIC-2.19□□□□□ -2.76
VCX3AQ9NNX9 RNU6-13P-201ENST00000384248 107 ntBASIC-2.19□□□□□ -2.76
VCX3AQ9NNX9 RNU6-12P-201ENST00000384604 107 ntBASIC-2.19□□□□□ -2.76
VCX3AQ9NNX9 RNU6-41P-201ENST00000384741 107 ntBASIC-2.19□□□□□ -2.76
VCX3AQ9NNX9 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.19□□□□□ -2.76
VCX3AQ9NNX9 snoU13.10-201ENST00000459301 103 ntBASIC-2.19□□□□□ -2.76
VCX3AQ9NNX9 MIR548W-201ENST00000581970 74 ntBASIC-2.19□□□□□ -2.76
VCX3AQ9NNX9 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.2□□□□□ -2.76
VCX3AQ9NNX9 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.2□□□□□ -2.76
VCX3AQ9NNX9 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.2□□□□□ -2.76
VCX3AQ9NNX9 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.2□□□□□ -2.76
VCX3AQ9NNX9 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.2□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms