Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.02□□□□□ -2.73
LRRC40Q9H9A6 RNY1P5-201ENST00000383890 115 ntBASIC-2.02□□□□□ -2.73
LRRC40Q9H9A6 RNU6-267P-201ENST00000516714 103 ntBASIC-2.02□□□□□ -2.73
LRRC40Q9H9A6 RNU6-247P-201ENST00000362636 107 ntBASIC-2.03□□□□□ -2.73
LRRC40Q9H9A6 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.03□□□□□ -2.73
LRRC40Q9H9A6 RNU6-686P-201ENST00000364839 107 ntBASIC-2.03□□□□□ -2.73
LRRC40Q9H9A6 MIR4484-201ENST00000582855 83 ntBASIC-2.03□□□□□ -2.73
LRRC40Q9H9A6 RNU6-766P-201ENST00000362478 107 ntBASIC-2.04□□□□□ -2.74
LRRC40Q9H9A6 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.04□□□□□ -2.74
LRRC40Q9H9A6 RNU4-88P-201ENST00000411220 86 ntBASIC-2.04□□□□□ -2.74
LRRC40Q9H9A6 SNORD115-31-201ENST00000365318 82 ntBASIC-2.05□□□□□ -2.74
LRRC40Q9H9A6 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.05□□□□□ -2.74
LRRC40Q9H9A6 RNU6-980P-201ENST00000516925 103 ntBASIC-2.05□□□□□ -2.74
LRRC40Q9H9A6 RNU7-151P-201ENST00000516930 53 ntBASIC-2.05□□□□□ -2.74
LRRC40Q9H9A6 MIR548BB-201ENST00000626714 66 ntBASIC-2.05□□□□□ -2.74
LRRC40Q9H9A6 RNU6-669P-201ENST00000365575 107 ntBASIC-2.06□□□□□ -2.74
LRRC40Q9H9A6 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.06□□□□□ -2.74
LRRC40Q9H9A6 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.06□□□□□ -2.74
LRRC40Q9H9A6 MIR7978-201ENST00000636158 59 ntBASIC-2.06□□□□□ -2.74
LRRC40Q9H9A6 SNORD113.1-201ENST00000363280 73 ntBASIC-2.07□□□□□ -2.74
LRRC40Q9H9A6 RNA5SP215-201ENST00000363440 122 ntBASIC-2.07□□□□□ -2.74
LRRC40Q9H9A6 RNU6-119P-201ENST00000364882 107 ntBASIC-2.07□□□□□ -2.74
LRRC40Q9H9A6 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.07□□□□□ -2.74
LRRC40Q9H9A6 MIR579-201ENST00000385221 98 ntBASIC-2.07□□□□□ -2.74
LRRC40Q9H9A6 MIR496-201ENST00000385226 102 ntBASIC-2.07□□□□□ -2.74
LRRC40Q9H9A6 RNU6-402P-201ENST00000410678 103 ntBASIC-2.07□□□□□ -2.74
LRRC40Q9H9A6 RNY3P8-201ENST00000411366 126 ntBASIC-2.07□□□□□ -2.74
LRRC40Q9H9A6 SNORD63.2-201ENST00000516303 64 ntBASIC-2.07□□□□□ -2.74
LRRC40Q9H9A6 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.07□□□□□ -2.74
LRRC40Q9H9A6 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.08□□□□□ -2.74
LRRC40Q9H9A6 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.08□□□□□ -2.74
LRRC40Q9H9A6 RNU6-974P-201ENST00000384099 108 ntBASIC-2.08□□□□□ -2.74
LRRC40Q9H9A6 SNORD45A-201ENST00000384512 84 ntBASIC-2.08□□□□□ -2.74
LRRC40Q9H9A6 MTND4LP1-201ENST00000446263 157 ntBASIC-2.08□□□□□ -2.74
LRRC40Q9H9A6 MIR548W-201ENST00000581970 74 ntBASIC-2.08□□□□□ -2.74
LRRC40Q9H9A6 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.08□□□□□ -2.74
LRRC40Q9H9A6 MIR664A-201ENST00000626086 82 ntBASIC-2.08□□□□□ -2.74
LRRC40Q9H9A6 U6.97-201ENST00000636904 101 ntBASIC-2.08□□□□□ -2.74
LRRC40Q9H9A6 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.09□□□□□ -2.74
LRRC40Q9H9A6 RNU6-668P-201ENST00000364180 107 ntBASIC-2.09□□□□□ -2.74
LRRC40Q9H9A6 MIR125B1-201ENST00000385236 88 ntBASIC-2.09□□□□□ -2.74
LRRC40Q9H9A6 SNORA27.2-201ENST00000363365 126 ntBASIC-2.1□□□□□ -2.75
LRRC40Q9H9A6 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.1□□□□□ -2.75
LRRC40Q9H9A6 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.1□□□□□ -2.75
LRRC40Q9H9A6 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.11□□□□□ -2.75
LRRC40Q9H9A6 RNU6-129P-201ENST00000391022 107 ntBASIC-2.11□□□□□ -2.75
LRRC40Q9H9A6 snoU13.10-201ENST00000459301 103 ntBASIC-2.11□□□□□ -2.75
LRRC40Q9H9A6 MIR3139-201ENST00000579145 76 ntBASIC-2.11□□□□□ -2.75
LRRC40Q9H9A6 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.11□□□□□ -2.75
LRRC40Q9H9A6 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.12□□□□□ -2.75
LRRC40Q9H9A6 RNU6-172P-201ENST00000411000 93 ntBASIC-2.12□□□□□ -2.75
LRRC40Q9H9A6 RNU6-523P-201ENST00000516304 54 ntBASIC-2.12□□□□□ -2.75
LRRC40Q9H9A6 SNORD116-22-201ENST00000384430 92 ntBASIC-2.13□□□□□ -2.75
LRRC40Q9H9A6 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.13□□□□□ -2.75
LRRC40Q9H9A6 RNY4P18-201ENST00000391107 89 ntBASIC-2.13□□□□□ -2.75
LRRC40Q9H9A6 RNU6-589P-201ENST00000516485 107 ntBASIC-2.13□□□□□ -2.75
LRRC40Q9H9A6 RNA5SP405-201ENST00000363059 114 ntBASIC-2.14□□□□□ -2.75
LRRC40Q9H9A6 RNU6-694P-201ENST00000364071 147 ntBASIC-2.14□□□□□ -2.75
LRRC40Q9H9A6 RNU6-995P-201ENST00000391244 107 ntBASIC-2.14□□□□□ -2.75
LRRC40Q9H9A6 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.14□□□□□ -2.75
LRRC40Q9H9A6 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.14□□□□□ -2.75
LRRC40Q9H9A6 MIR581-201ENST00000384895 96 ntBASIC-2.15□□□□□ -2.75
LRRC40Q9H9A6 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.15□□□□□ -2.75
LRRC40Q9H9A6 MIR8053-201ENST00000613344 75 ntBASIC-2.15□□□□□ -2.75
LRRC40Q9H9A6 MALAT1.1-201ENST00000618249 95 ntBASIC-2.15□□□□□ -2.75
LRRC40Q9H9A6 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.16□□□□□ -2.76
LRRC40Q9H9A6 AP001318.4-201ENST00000616637 121 ntBASIC-2.16□□□□□ -2.76
LRRC40Q9H9A6 MIR1297-201ENST00000637311 77 ntBASIC-2.16□□□□□ -2.76
LRRC40Q9H9A6 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.17□□□□□ -2.76
LRRC40Q9H9A6 SNORD116-24-201ENST00000384549 92 ntBASIC-2.17□□□□□ -2.76
LRRC40Q9H9A6 MIR450A1-201ENST00000362262 91 ntBASIC-2.18□□□□□ -2.76
LRRC40Q9H9A6 RNA5SP173-201ENST00000364857 136 ntBASIC-2.18□□□□□ -2.76
LRRC40Q9H9A6 AC006160.2-201ENST00000637708 154 ntBASIC-2.18□□□□□ -2.76
LRRC40Q9H9A6 SNORA63.4-201ENST00000362763 126 ntBASIC-2.19□□□□□ -2.76
LRRC40Q9H9A6 RNU6-194P-201ENST00000363862 105 ntBASIC-2.19□□□□□ -2.76
LRRC40Q9H9A6 MT-TM-201ENST00000387377 68 ntBASIC-2.19□□□□□ -2.76
LRRC40Q9H9A6 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.19□□□□□ -2.76
LRRC40Q9H9A6 MIR2052-201ENST00000636055 55 ntBASIC-2.19□□□□□ -2.76
LRRC40Q9H9A6 MIR488-201ENST00000365739 83 ntBASIC-2.2□□□□□ -2.76
LRRC40Q9H9A6 RNU6-675P-201ENST00000384236 104 ntBASIC-2.2□□□□□ -2.76
LRRC40Q9H9A6 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.2□□□□□ -2.76
LRRC40Q9H9A6 AL365222.1-201ENST00000614661 98 ntBASIC-2.21□□□□□ -2.76
LRRC40Q9H9A6 RNU6-959P-201ENST00000384671 107 ntBASIC-2.23□□□□□ -2.77
LRRC40Q9H9A6 SNORD18C-201ENST00000362704 69 ntBASIC-2.24□□□□□ -2.77
LRRC40Q9H9A6 RNU6-755P-201ENST00000364400 103 ntBASIC-2.24□□□□□ -2.77
LRRC40Q9H9A6 SNORD54-201ENST00000459159 67 ntBASIC-2.24□□□□□ -2.77
LRRC40Q9H9A6 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.25□□□□□ -2.77
LRRC40Q9H9A6 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.25□□□□□ -2.77
LRRC40Q9H9A6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.25□□□□□ -2.77
LRRC40Q9H9A6 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.26□□□□□ -2.77
LRRC40Q9H9A6 AL031737.1-201ENST00000450125 223 ntBASIC-2.26□□□□□ -2.77
LRRC40Q9H9A6 MIR3133-201ENST00000583157 78 ntBASIC-2.26□□□□□ -2.77
LRRC40Q9H9A6 MIR202-201ENST00000362219 110 ntBASIC-2.27□□□□□ -2.77
LRRC40Q9H9A6 RNU6-520P-201ENST00000384717 104 ntBASIC-2.27□□□□□ -2.77
LRRC40Q9H9A6 AC008267.6-201ENST00000441664 139 ntBASIC-2.27□□□□□ -2.77
LRRC40Q9H9A6 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.27□□□□□ -2.77
LRRC40Q9H9A6 RNU6-315P-201ENST00000362666 107 ntBASIC-2.28□□□□□ -2.77
LRRC40Q9H9A6 RNU6-640P-201ENST00000363693 105 ntBASIC-2.28□□□□□ -2.77
LRRC40Q9H9A6 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.28□□□□□ -2.77
LRRC40Q9H9A6 SNORA40.13-201ENST00000516379 120 ntBASIC-2.28□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 298 ms