Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6-1184P-201ENST00000384588 108 ntBASIC0.05□□□□□ -2.4
EBF3Q9H4W6 RNU6-901P-201ENST00000384593 106 ntBASIC0.05□□□□□ -2.4
EBF3Q9H4W6 MIR124-2-201ENST00000385081 109 ntBASIC0.05□□□□□ -2.4
EBF3Q9H4W6 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.05□□□□□ -2.4
EBF3Q9H4W6 AL590491.3-201ENST00000610731 82 ntBASIC0.05□□□□□ -2.4
EBF3Q9H4W6 MIR6759-201ENST00000638110 65 ntBASIC0.05□□□□□ -2.4
EBF3Q9H4W6 RNU6-1267P-201ENST00000410747 107 ntBASIC0.04□□□□□ -2.4
EBF3Q9H4W6 SNORD57-201ENST00000448188 72 ntBASIC0.04□□□□□ -2.4
EBF3Q9H4W6 SNORD38.3-201ENST00000516599 73 ntBASIC0.04□□□□□ -2.4
EBF3Q9H4W6 RNU6-980P-201ENST00000516925 103 ntBASIC0.04□□□□□ -2.4
EBF3Q9H4W6 RNU6-46P-201ENST00000383860 107 ntBASIC0.03□□□□□ -2.4
EBF3Q9H4W6 Y_RNA.613-201ENST00000410726 97 ntBASIC0.03□□□□□ -2.4
EBF3Q9H4W6 Y_RNA.722-201ENST00000517279 114 ntBASIC0.03□□□□□ -2.4
EBF3Q9H4W6 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
EBF3Q9H4W6 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
EBF3Q9H4W6 MIR6851-201ENST00000617060 67 ntBASIC0.02□□□□□ -2.41
EBF3Q9H4W6 RNA5SP476-201ENST00000516613 103 ntBASIC0.01□□□□□ -2.41
EBF3Q9H4W6 Y_RNA.69-201ENST00000362885 109 ntBASIC0□□□□□ -2.41
EBF3Q9H4W6 RNU6-924P-201ENST00000362926 108 ntBASIC0□□□□□ -2.41
EBF3Q9H4W6 MIR548AA1-201ENST00000384971 97 ntBASIC0□□□□□ -2.41
EBF3Q9H4W6 MIR125B1-201ENST00000385236 88 ntBASIC0□□□□□ -2.41
EBF3Q9H4W6 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0□□□□□ -2.41
EBF3Q9H4W6 SNORD19-201ENST00000391191 68 ntBASIC0□□□□□ -2.41
EBF3Q9H4W6 AC104692.1-201ENST00000472406 90 ntBASIC0□□□□□ -2.41
EBF3Q9H4W6 RNU6-732P-201ENST00000516033 103 ntBASIC0□□□□□ -2.41
EBF3Q9H4W6 RNU6-974P-201ENST00000384099 108 ntBASIC-0.01□□□□□ -2.41
EBF3Q9H4W6 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.01□□□□□ -2.41
EBF3Q9H4W6 MIR6086-201ENST00000638065 55 ntBASIC-0.01□□□□□ -2.41
EBF3Q9H4W6 SNORD63.1-201ENST00000516178 80 ntBASIC-0.02□□□□□ -2.41
EBF3Q9H4W6 MIR548X-201ENST00000580069 75 ntBASIC-0.02□□□□□ -2.41
EBF3Q9H4W6 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.02□□□□□ -2.41
EBF3Q9H4W6 MIR1295B-201ENST00000636144 60 ntBASIC-0.02□□□□□ -2.41
EBF3Q9H4W6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.03□□□□□ -2.41
EBF3Q9H4W6 RNU7-160P-201ENST00000516660 62 ntBASIC-0.03□□□□□ -2.41
EBF3Q9H4W6 RNA5SP169-201ENST00000517268 117 ntBASIC-0.03□□□□□ -2.41
EBF3Q9H4W6 AP002795.1-201ENST00000534879 84 ntBASIC-0.03□□□□□ -2.41
EBF3Q9H4W6 MIR4636-201ENST00000582271 80 ntBASIC-0.03□□□□□ -2.41
EBF3Q9H4W6 SNORD114-12-201ENST00000365400 75 ntBASIC-0.04□□□□□ -2.42
EBF3Q9H4W6 RNU6-808P-201ENST00000391233 108 ntBASIC-0.04□□□□□ -2.42
EBF3Q9H4W6 HAR1A.1-201ENST00000459583 118 ntBASIC-0.04□□□□□ -2.42
EBF3Q9H4W6 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.04□□□□□ -2.42
EBF3Q9H4W6 RNU6-419P-201ENST00000517030 63 ntBASIC-0.04□□□□□ -2.42
EBF3Q9H4W6 RNA5SP66-201ENST00000517178 101 ntBASIC-0.04□□□□□ -2.42
EBF3Q9H4W6 MIR3170-201ENST00000582699 77 ntBASIC-0.04□□□□□ -2.42
EBF3Q9H4W6 RNU4-33P-201ENST00000364316 85 ntBASIC-0.05□□□□□ -2.42
EBF3Q9H4W6 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
EBF3Q9H4W6 MIR5589-201ENST00000579442 60 ntBASIC-0.05□□□□□ -2.42
EBF3Q9H4W6 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.06□□□□□ -2.42
EBF3Q9H4W6 SNORD114-11-201ENST00000363738 75 ntBASIC-0.06□□□□□ -2.42
EBF3Q9H4W6 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.06□□□□□ -2.42
EBF3Q9H4W6 MIR520D-201ENST00000385002 87 ntBASIC-0.06□□□□□ -2.42
EBF3Q9H4W6 RNU6-995P-201ENST00000391244 107 ntBASIC-0.06□□□□□ -2.42
EBF3Q9H4W6 SNORD22.1-201ENST00000516331 125 ntBASIC-0.06□□□□□ -2.42
EBF3Q9H4W6 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.07□□□□□ -2.42
EBF3Q9H4W6 SNORA18.1-201ENST00000363418 128 ntBASIC-0.07□□□□□ -2.42
EBF3Q9H4W6 RNU6-753P-201ENST00000363926 107 ntBASIC-0.07□□□□□ -2.42
EBF3Q9H4W6 RNU6-258P-201ENST00000390884 101 ntBASIC-0.07□□□□□ -2.42
EBF3Q9H4W6 RNU4-88P-201ENST00000411220 86 ntBASIC-0.07□□□□□ -2.42
EBF3Q9H4W6 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.08□□□□□ -2.42
EBF3Q9H4W6 SNORD18.2-201ENST00000459604 70 ntBASIC-0.08□□□□□ -2.42
EBF3Q9H4W6 MIR4802-201ENST00000581881 80 ntBASIC-0.08□□□□□ -2.42
EBF3Q9H4W6 AC093726.3-201ENST00000637588 150 ntBASIC-0.08□□□□□ -2.42
EBF3Q9H4W6 MIR518B-201ENST00000385127 83 ntBASIC-0.09□□□□□ -2.42
EBF3Q9H4W6 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.09□□□□□ -2.42
EBF3Q9H4W6 SNORD4A-201ENST00000459174 72 ntBASIC-0.09□□□□□ -2.42
EBF3Q9H4W6 MIR3666-201ENST00000607845 111 ntBASIC-0.09□□□□□ -2.42
EBF3Q9H4W6 SNORD74.6-201ENST00000364796 70 ntBASIC-0.1□□□□□ -2.43
EBF3Q9H4W6 MIR548Q-201ENST00000408404 100 ntBASIC-0.1□□□□□ -2.43
EBF3Q9H4W6 IGLVI-20-201ENST00000519296 130 ntBASIC-0.1□□□□□ -2.43
EBF3Q9H4W6 MIR4788-201ENST00000639104 80 ntBASIC-0.1□□□□□ -2.43
EBF3Q9H4W6 SNORD114-31-201ENST00000363219 75 ntBASIC-0.11□□□□□ -2.43
EBF3Q9H4W6 SNORA32.1-201ENST00000364514 115 ntBASIC-0.11□□□□□ -2.43
EBF3Q9H4W6 RNU6-828P-201ENST00000364876 107 ntBASIC-0.11□□□□□ -2.43
EBF3Q9H4W6 RNA5SP300-201ENST00000391197 107 ntBASIC-0.11□□□□□ -2.43
EBF3Q9H4W6 RNU6-721P-201ENST00000410155 105 ntBASIC-0.11□□□□□ -2.43
EBF3Q9H4W6 SNORD63.2-201ENST00000516303 64 ntBASIC-0.11□□□□□ -2.43
EBF3Q9H4W6 MIR4263-201ENST00000584745 83 ntBASIC-0.11□□□□□ -2.43
EBF3Q9H4W6 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.12□□□□□ -2.43
EBF3Q9H4W6 SNORA26.4-201ENST00000391188 123 ntBASIC-0.12□□□□□ -2.43
EBF3Q9H4W6 SNORD75.1-201ENST00000408373 60 ntBASIC-0.12□□□□□ -2.43
EBF3Q9H4W6 AP000533.3-201ENST00000447704 118 ntBASIC-0.13□□□□□ -2.43
EBF3Q9H4W6 MIR3179-1-201ENST00000578940 84 ntBASIC-0.13□□□□□ -2.43
EBF3Q9H4W6 MIR3179-2-201ENST00000579107 84 ntBASIC-0.13□□□□□ -2.43
EBF3Q9H4W6 MIR3179-3-201ENST00000579566 84 ntBASIC-0.13□□□□□ -2.43
EBF3Q9H4W6 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.13□□□□□ -2.43
EBF3Q9H4W6 MIR3179-4-201ENST00000617599 84 ntBASIC-0.13□□□□□ -2.43
EBF3Q9H4W6 SNORD114-17-201ENST00000364699 75 ntBASIC-0.14□□□□□ -2.43
EBF3Q9H4W6 AL451105.1-201ENST00000450005 189 ntBASIC-0.14□□□□□ -2.43
EBF3Q9H4W6 MIR214-201ENST00000385214 110 ntBASIC-0.15□□□□□ -2.43
EBF3Q9H4W6 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.15□□□□□ -2.43
EBF3Q9H4W6 RNU6-247P-201ENST00000362636 107 ntBASIC-0.16□□□□□ -2.44
EBF3Q9H4W6 SNORD115-33-201ENST00000363723 82 ntBASIC-0.16□□□□□ -2.44
EBF3Q9H4W6 RNU6-608P-201ENST00000383927 104 ntBASIC-0.16□□□□□ -2.44
EBF3Q9H4W6 MIR5683-201ENST00000636514 76 ntBASIC-0.16□□□□□ -2.44
EBF3Q9H4W6 MIR204-201ENST00000385200 110 ntBASIC-0.17□□□□□ -2.44
EBF3Q9H4W6 AL353691.2-201ENST00000443795 59 ntBASIC-0.17□□□□□ -2.44
EBF3Q9H4W6 MIR548F3-201ENST00000408509 87 ntBASIC-0.18□□□□□ -2.44
EBF3Q9H4W6 MIR29B1-201ENST00000385015 81 ntBASIC-0.19□□□□□ -2.44
EBF3Q9H4W6 RNU6-930P-201ENST00000390938 100 ntBASIC-0.19□□□□□ -2.44
EBF3Q9H4W6 Z95118.1-201ENST00000421372 247 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 292.5 ms