Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RNU6-980P-201ENST00000516925 103 ntBASIC-2.17□□□□□ -2.76
VCX3BQ9H321 RNU7-151P-201ENST00000516930 53 ntBASIC-2.17□□□□□ -2.76
VCX3BQ9H321 MIR8053-201ENST00000613344 75 ntBASIC-2.17□□□□□ -2.76
VCX3BQ9H321 MIR2052-201ENST00000636055 55 ntBASIC-2.17□□□□□ -2.76
VCX3BQ9H321 MIR1297-201ENST00000637311 77 ntBASIC-2.17□□□□□ -2.76
VCX3BQ9H321 SNORD116-22-201ENST00000384430 92 ntBASIC-2.18□□□□□ -2.76
VCX3BQ9H321 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.18□□□□□ -2.76
VCX3BQ9H321 SNORA27.2-201ENST00000363365 126 ntBASIC-2.19□□□□□ -2.76
VCX3BQ9H321 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.19□□□□□ -2.76
VCX3BQ9H321 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.19□□□□□ -2.76
VCX3BQ9H321 RNU6-669P-201ENST00000365575 107 ntBASIC-2.19□□□□□ -2.76
VCX3BQ9H321 SNORD45A-201ENST00000384512 84 ntBASIC-2.19□□□□□ -2.76
VCX3BQ9H321 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.19□□□□□ -2.76
VCX3BQ9H321 MIR579-201ENST00000385221 98 ntBASIC-2.19□□□□□ -2.76
VCX3BQ9H321 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.19□□□□□ -2.76
VCX3BQ9H321 MIR601-201ENST00000385256 79 ntBASIC-2.2□□□□□ -2.76
VCX3BQ9H321 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.2□□□□□ -2.76
VCX3BQ9H321 RNU4-88P-201ENST00000411220 86 ntBASIC-2.2□□□□□ -2.76
VCX3BQ9H321 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.2□□□□□ -2.76
VCX3BQ9H321 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.2□□□□□ -2.76
VCX3BQ9H321 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.21□□□□□ -2.76
VCX3BQ9H321 RNY4P18-201ENST00000391107 89 ntBASIC-2.21□□□□□ -2.76
VCX3BQ9H321 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.21□□□□□ -2.76
VCX3BQ9H321 MIR7978-201ENST00000636158 59 ntBASIC-2.21□□□□□ -2.76
VCX3BQ9H321 U6.97-201ENST00000636904 101 ntBASIC-2.21□□□□□ -2.76
VCX3BQ9H321 RNU6-172P-201ENST00000411000 93 ntBASIC-2.22□□□□□ -2.76
VCX3BQ9H321 RNY3P8-201ENST00000411366 126 ntBASIC-2.22□□□□□ -2.76
VCX3BQ9H321 RNU6-589P-201ENST00000516485 107 ntBASIC-2.22□□□□□ -2.76
VCX3BQ9H321 MALAT1.1-201ENST00000618249 95 ntBASIC-2.22□□□□□ -2.76
VCX3BQ9H321 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.22□□□□□ -2.76
VCX3BQ9H321 MIR125B1-201ENST00000385236 88 ntBASIC-2.23□□□□□ -2.77
VCX3BQ9H321 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.23□□□□□ -2.77
VCX3BQ9H321 MIR664A-201ENST00000626086 82 ntBASIC-2.23□□□□□ -2.77
VCX3BQ9H321 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.24□□□□□ -2.77
VCX3BQ9H321 RNU6-523P-201ENST00000516304 54 ntBASIC-2.24□□□□□ -2.77
VCX3BQ9H321 SNORA63.4-201ENST00000362763 126 ntBASIC-2.25□□□□□ -2.77
VCX3BQ9H321 SNORD115-31-201ENST00000365318 82 ntBASIC-2.25□□□□□ -2.77
VCX3BQ9H321 RNU6-380P-201ENST00000410207 107 ntBASIC-2.25□□□□□ -2.77
VCX3BQ9H321 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.25□□□□□ -2.77
VCX3BQ9H321 MIR365A-201ENST00000362260 87 ntBASIC-2.26□□□□□ -2.77
VCX3BQ9H321 MIR548W-201ENST00000581970 74 ntBASIC-2.26□□□□□ -2.77
VCX3BQ9H321 MIR450A1-201ENST00000362262 91 ntBASIC-2.27□□□□□ -2.77
VCX3BQ9H321 RNU6-755P-201ENST00000364400 103 ntBASIC-2.27□□□□□ -2.77
VCX3BQ9H321 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.27□□□□□ -2.77
VCX3BQ9H321 snoU13.10-201ENST00000459301 103 ntBASIC-2.27□□□□□ -2.77
VCX3BQ9H321 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.28□□□□□ -2.77
VCX3BQ9H321 RNA5SP331-201ENST00000364986 107 ntBASIC-2.28□□□□□ -2.77
VCX3BQ9H321 RNU6-974P-201ENST00000384099 108 ntBASIC-2.28□□□□□ -2.77
VCX3BQ9H321 MIR1468-201ENST00000410600 86 ntBASIC-2.28□□□□□ -2.77
VCX3BQ9H321 AC008267.6-201ENST00000441664 139 ntBASIC-2.28□□□□□ -2.77
VCX3BQ9H321 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.28□□□□□ -2.77
VCX3BQ9H321 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.29□□□□□ -2.78
VCX3BQ9H321 MIR4441-201ENST00000582623 100 ntBASIC-2.29□□□□□ -2.78
VCX3BQ9H321 AC006160.2-201ENST00000637708 154 ntBASIC-2.29□□□□□ -2.78
VCX3BQ9H321 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.3□□□□□ -2.78
VCX3BQ9H321 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.3□□□□□ -2.78
VCX3BQ9H321 RNU6-675P-201ENST00000384236 104 ntBASIC-2.3□□□□□ -2.78
VCX3BQ9H321 AL031737.1-201ENST00000450125 223 ntBASIC-2.3□□□□□ -2.78
VCX3BQ9H321 AP001318.4-201ENST00000616637 121 ntBASIC-2.3□□□□□ -2.78
VCX3BQ9H321 RNA5SP405-201ENST00000363059 114 ntBASIC-2.31□□□□□ -2.78
VCX3BQ9H321 RNU6-959P-201ENST00000384671 107 ntBASIC-2.31□□□□□ -2.78
VCX3BQ9H321 AL365222.1-201ENST00000614661 98 ntBASIC-2.31□□□□□ -2.78
VCX3BQ9H321 SNORD18C-201ENST00000362704 69 ntBASIC-2.33□□□□□ -2.78
VCX3BQ9H321 RNU6-194P-201ENST00000363862 105 ntBASIC-2.33□□□□□ -2.78
VCX3BQ9H321 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.33□□□□□ -2.78
VCX3BQ9H321 SNORD116-24-201ENST00000384549 92 ntBASIC-2.33□□□□□ -2.78
VCX3BQ9H321 SNORA40.13-201ENST00000516379 120 ntBASIC-2.33□□□□□ -2.78
VCX3BQ9H321 RNU6-315P-201ENST00000362666 107 ntBASIC-2.34□□□□□ -2.78
VCX3BQ9H321 MIR488-201ENST00000365739 83 ntBASIC-2.34□□□□□ -2.78
VCX3BQ9H321 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.34□□□□□ -2.78
VCX3BQ9H321 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.34□□□□□ -2.78
VCX3BQ9H321 MIR3133-201ENST00000583157 78 ntBASIC-2.34□□□□□ -2.78
VCX3BQ9H321 RNU6-834P-201ENST00000362367 110 ntBASIC-2.35□□□□□ -2.79
VCX3BQ9H321 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.35□□□□□ -2.79
VCX3BQ9H321 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.35□□□□□ -2.79
VCX3BQ9H321 RNU6-118P-201ENST00000516552 102 ntBASIC-2.35□□□□□ -2.79
VCX3BQ9H321 RNU6-789P-201ENST00000517105 102 ntBASIC-2.35□□□□□ -2.79
VCX3BQ9H321 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.36□□□□□ -2.79
VCX3BQ9H321 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.36□□□□□ -2.79
VCX3BQ9H321 MIR581-201ENST00000384895 96 ntBASIC-2.36□□□□□ -2.79
VCX3BQ9H321 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.37□□□□□ -2.79
VCX3BQ9H321 RNU6-844P-201ENST00000517175 102 ntBASIC-2.37□□□□□ -2.79
VCX3BQ9H321 RNU6-520P-201ENST00000384717 104 ntBASIC-2.38□□□□□ -2.79
VCX3BQ9H321 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.38□□□□□ -2.79
VCX3BQ9H321 RNU7-160P-201ENST00000516660 62 ntBASIC-2.38□□□□□ -2.79
VCX3BQ9H321 MIR202-201ENST00000362219 110 ntBASIC-2.39□□□□□ -2.79
VCX3BQ9H321 AC099654.10-201ENST00000640395 161 ntBASIC-2.39□□□□□ -2.79
VCX3BQ9H321 RNU6-895P-201ENST00000384125 103 ntBASIC-2.4□□□□□ -2.79
VCX3BQ9H321 RNU6-649P-201ENST00000384463 107 ntBASIC-2.4□□□□□ -2.79
VCX3BQ9H321 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.4□□□□□ -2.79
VCX3BQ9H321 MIR466-201ENST00000580653 84 ntBASIC-2.4□□□□□ -2.79
VCX3BQ9H321 RNU6-640P-201ENST00000363693 105 ntBASIC-2.41□□□□□ -2.8
VCX3BQ9H321 RNY1P1-201ENST00000364372 112 ntBASIC-2.41□□□□□ -2.8
VCX3BQ9H321 RNU6-828P-201ENST00000364876 107 ntBASIC-2.41□□□□□ -2.8
VCX3BQ9H321 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.41□□□□□ -2.8
VCX3BQ9H321 MIR154-201ENST00000385243 84 ntBASIC-2.41□□□□□ -2.8
VCX3BQ9H321 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.41□□□□□ -2.8
VCX3BQ9H321 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.41□□□□□ -2.8
VCX3BQ9H321 AC090425.1-201ENST00000610007 140 ntBASIC-2.41□□□□□ -2.8
VCX3BQ9H321 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.41□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 239.8 ms