Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.93□□□□□ -2.56
SIN3AQ96ST3 RNU6-34P-201ENST00000364874 107 ntBASIC-0.93□□□□□ -2.56
SIN3AQ96ST3 MIR154-201ENST00000385243 84 ntBASIC-0.93□□□□□ -2.56
SIN3AQ96ST3 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.93□□□□□ -2.56
SIN3AQ96ST3 U4.4-201ENST00000620626 117 ntBASIC-0.93□□□□□ -2.56
SIN3AQ96ST3 MIR601-201ENST00000385256 79 ntBASIC-0.94□□□□□ -2.56
SIN3AQ96ST3 RNU6-687P-201ENST00000516443 89 ntBASIC-0.94□□□□□ -2.56
SIN3AQ96ST3 MIR382-201ENST00000637119 76 ntBASIC-0.94□□□□□ -2.56
SIN3AQ96ST3 RNU6-228P-201ENST00000362700 106 ntBASIC-0.95□□□□□ -2.56
SIN3AQ96ST3 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.95□□□□□ -2.56
SIN3AQ96ST3 RNA5SP215-201ENST00000363440 122 ntBASIC-0.95□□□□□ -2.56
SIN3AQ96ST3 SNORD115-31-201ENST00000365318 82 ntBASIC-0.95□□□□□ -2.56
SIN3AQ96ST3 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.95□□□□□ -2.56
SIN3AQ96ST3 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.96□□□□□ -2.56
SIN3AQ96ST3 SNORD116-24-201ENST00000384549 92 ntBASIC-0.96□□□□□ -2.56
SIN3AQ96ST3 MIR548V-201ENST00000584165 80 ntBASIC-0.96□□□□□ -2.56
SIN3AQ96ST3 uc_338.19-201ENST00000616808 99 ntBASIC-0.96□□□□□ -2.56
SIN3AQ96ST3 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.97□□□□□ -2.56
SIN3AQ96ST3 MIR1302-4-201ENST00000408701 150 ntBASIC-0.97□□□□□ -2.56
SIN3AQ96ST3 MIR4499-201ENST00000584834 69 ntBASIC-0.97□□□□□ -2.56
SIN3AQ96ST3 MIR4723-201ENST00000585070 81 ntBASIC-0.98□□□□□ -2.57
SIN3AQ96ST3 U7.4-201ENST00000614961 63 ntBASIC-0.98□□□□□ -2.57
SIN3AQ96ST3 MIR4679-1-201ENST00000637619 75 ntBASIC-0.98□□□□□ -2.57
SIN3AQ96ST3 RNU6-895P-201ENST00000384125 103 ntBASIC-0.99□□□□□ -2.57
SIN3AQ96ST3 RNU6-24P-201ENST00000384440 107 ntBASIC-0.99□□□□□ -2.57
SIN3AQ96ST3 RNU6-411P-201ENST00000384451 107 ntBASIC-0.99□□□□□ -2.57
SIN3AQ96ST3 MIR1255A-201ENST00000408338 113 ntBASIC-0.99□□□□□ -2.57
SIN3AQ96ST3 snoU83B.1-201ENST00000517136 88 ntBASIC-0.99□□□□□ -2.57
SIN3AQ96ST3 U7.5-201ENST00000517224 61 ntBASIC-0.99□□□□□ -2.57
SIN3AQ96ST3 RNU6-1233P-201ENST00000362922 102 ntBASIC-1□□□□□ -2.57
SIN3AQ96ST3 Y_RNA.282-201ENST00000364793 102 ntBASIC-1□□□□□ -2.57
SIN3AQ96ST3 MIR630-201ENST00000384957 97 ntBASIC-1□□□□□ -2.57
SIN3AQ96ST3 SNORA26.4-201ENST00000391188 123 ntBASIC-1□□□□□ -2.57
SIN3AQ96ST3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.01□□□□□ -2.57
SIN3AQ96ST3 RNU6-458P-201ENST00000384179 107 ntBASIC-1.01□□□□□ -2.57
SIN3AQ96ST3 RNU6-279P-201ENST00000391297 101 ntBASIC-1.01□□□□□ -2.57
SIN3AQ96ST3 RNU7-88P-201ENST00000458752 63 ntBASIC-1.01□□□□□ -2.57
SIN3AQ96ST3 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.01□□□□□ -2.57
SIN3AQ96ST3 U6.58-201ENST00000613107 107 ntBASIC-1.01□□□□□ -2.57
SIN3AQ96ST3 RNU6-857P-201ENST00000515893 110 ntBASIC-1.02□□□□□ -2.57
SIN3AQ96ST3 SNORD115-33-201ENST00000363723 82 ntBASIC-1.03□□□□□ -2.57
SIN3AQ96ST3 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.03□□□□□ -2.57
SIN3AQ96ST3 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.03□□□□□ -2.57
SIN3AQ96ST3 MIR527-201ENST00000385244 85 ntBASIC-1.03□□□□□ -2.57
SIN3AQ96ST3 RNU6-732P-201ENST00000516033 103 ntBASIC-1.03□□□□□ -2.57
SIN3AQ96ST3 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.03□□□□□ -2.57
SIN3AQ96ST3 MIR378F-201ENST00000578143 78 ntBASIC-1.03□□□□□ -2.57
SIN3AQ96ST3 SNORD63.1-201ENST00000516178 80 ntBASIC-1.04□□□□□ -2.58
SIN3AQ96ST3 MIR3115-201ENST00000577915 68 ntBASIC-1.04□□□□□ -2.58
SIN3AQ96ST3 MIR3165-201ENST00000579874 75 ntBASIC-1.04□□□□□ -2.58
SIN3AQ96ST3 SNORD78.1-201ENST00000390866 65 ntBASIC-1.05□□□□□ -2.58
SIN3AQ96ST3 SNORD113-2-201ENST00000391082 72 ntBASIC-1.05□□□□□ -2.58
SIN3AQ96ST3 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.06□□□□□ -2.58
SIN3AQ96ST3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.06□□□□□ -2.58
SIN3AQ96ST3 MIR29B1-201ENST00000385015 81 ntBASIC-1.06□□□□□ -2.58
SIN3AQ96ST3 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.06□□□□□ -2.58
SIN3AQ96ST3 RNU6-634P-201ENST00000459134 106 ntBASIC-1.07□□□□□ -2.58
SIN3AQ96ST3 U4.2-201ENST00000618561 85 ntBASIC-1.07□□□□□ -2.58
SIN3AQ96ST3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.08□□□□□ -2.58
SIN3AQ96ST3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.08□□□□□ -2.58
SIN3AQ96ST3 RNU6-523P-201ENST00000516304 54 ntBASIC-1.08□□□□□ -2.58
SIN3AQ96ST3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.08□□□□□ -2.58
SIN3AQ96ST3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.08□□□□□ -2.58
SIN3AQ96ST3 MIR429-201ENST00000362106 83 ntBASIC-1.09□□□□□ -2.58
SIN3AQ96ST3 RNA5SP225-201ENST00000410874 135 ntBASIC-1.09□□□□□ -2.58
SIN3AQ96ST3 SNORD19-201ENST00000391191 68 ntBASIC-1.1□□□□□ -2.59
SIN3AQ96ST3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.1□□□□□ -2.59
SIN3AQ96ST3 AL353691.2-201ENST00000443795 59 ntBASIC-1.11□□□□□ -2.59
SIN3AQ96ST3 SNORD116-16-201ENST00000384533 92 ntBASIC-1.12□□□□□ -2.59
SIN3AQ96ST3 RNU6-540P-201ENST00000384622 101 ntBASIC-1.12□□□□□ -2.59
SIN3AQ96ST3 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.12□□□□□ -2.59
SIN3AQ96ST3 RNU6-696P-201ENST00000390834 107 ntBASIC-1.12□□□□□ -2.59
SIN3AQ96ST3 MIR6818-201ENST00000621576 65 ntBASIC-1.12□□□□□ -2.59
SIN3AQ96ST3 SNORA41B-201ENST00000384785 128 ntBASIC-1.13□□□□□ -2.59
SIN3AQ96ST3 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.13□□□□□ -2.59
SIN3AQ96ST3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.13□□□□□ -2.59
SIN3AQ96ST3 RNU6-598P-201ENST00000364017 105 ntBASIC-1.14□□□□□ -2.59
SIN3AQ96ST3 AP002795.1-201ENST00000534879 84 ntBASIC-1.14□□□□□ -2.59
SIN3AQ96ST3 MIR4306-201ENST00000583390 91 ntBASIC-1.14□□□□□ -2.59
SIN3AQ96ST3 MIR889-201ENST00000401280 79 ntBASIC-1.15□□□□□ -2.59
SIN3AQ96ST3 RNU6-542P-201ENST00000516405 103 ntBASIC-1.16□□□□□ -2.6
SIN3AQ96ST3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.16□□□□□ -2.6
SIN3AQ96ST3 MIR365A-201ENST00000362260 87 ntBASIC-1.17□□□□□ -2.6
SIN3AQ96ST3 RNA5SP26-201ENST00000362406 119 ntBASIC-1.17□□□□□ -2.6
SIN3AQ96ST3 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.17□□□□□ -2.6
SIN3AQ96ST3 RNU6-576P-201ENST00000390854 102 ntBASIC-1.17□□□□□ -2.6
SIN3AQ96ST3 RNU6-663P-201ENST00000391105 106 ntBASIC-1.17□□□□□ -2.6
SIN3AQ96ST3 RNU7-134P-201ENST00000458997 64 ntBASIC-1.17□□□□□ -2.6
SIN3AQ96ST3 SNORD114-3-201ENST00000364969 75 ntBASIC-1.18□□□□□ -2.6
SIN3AQ96ST3 MIR1207-201ENST00000408249 87 ntBASIC-1.18□□□□□ -2.6
SIN3AQ96ST3 MIR5683-201ENST00000636514 76 ntBASIC-1.18□□□□□ -2.6
SIN3AQ96ST3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.19□□□□□ -2.6
SIN3AQ96ST3 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.19□□□□□ -2.6
SIN3AQ96ST3 MIR507-201ENST00000385234 94 ntBASIC-1.19□□□□□ -2.6
SIN3AQ96ST3 U2.18-201ENST00000622185 84 ntBASIC-1.19□□□□□ -2.6
SIN3AQ96ST3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.2□□□□□ -2.6
SIN3AQ96ST3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.2□□□□□ -2.6
SIN3AQ96ST3 MIR4490-201ENST00000582647 84 ntBASIC-1.2□□□□□ -2.6
SIN3AQ96ST3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
SIN3AQ96ST3 MIR1285-2-201ENST00000408311 88 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 237.2 ms