Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 MIR520D-201ENST00000385002 87 ntBASIC-2.45□□□□□ -2.8
CCDC43Q96MW1 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.45□□□□□ -2.8
CCDC43Q96MW1 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.46□□□□□ -2.8
CCDC43Q96MW1 RNY4P7-201ENST00000364600 96 ntBASIC-2.46□□□□□ -2.8
CCDC43Q96MW1 RNU6-497P-201ENST00000365316 104 ntBASIC-2.46□□□□□ -2.8
CCDC43Q96MW1 RNU6-22P-201ENST00000384355 107 ntBASIC-2.46□□□□□ -2.8
CCDC43Q96MW1 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.47□□□□□ -2.8
CCDC43Q96MW1 RNA5SP86-201ENST00000390869 98 ntBASIC-2.47□□□□□ -2.8
CCDC43Q96MW1 RNU6-129P-201ENST00000391022 107 ntBASIC-2.47□□□□□ -2.8
CCDC43Q96MW1 MIR4484-201ENST00000582855 83 ntBASIC-2.47□□□□□ -2.8
CCDC43Q96MW1 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.48□□□□□ -2.81
CCDC43Q96MW1 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.48□□□□□ -2.81
CCDC43Q96MW1 MIR548V-201ENST00000584165 80 ntBASIC-2.48□□□□□ -2.81
CCDC43Q96MW1 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.5□□□□□ -2.81
CCDC43Q96MW1 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.5□□□□□ -2.81
CCDC43Q96MW1 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.5□□□□□ -2.81
CCDC43Q96MW1 MIR548H1-201ENST00000408610 102 ntBASIC-2.5□□□□□ -2.81
CCDC43Q96MW1 MIR23C-201ENST00000579846 100 ntBASIC-2.5□□□□□ -2.81
CCDC43Q96MW1 MIR3668-201ENST00000582138 75 ntBASIC-2.51□□□□□ -2.81
CCDC43Q96MW1 SNORD54-201ENST00000459159 67 ntBASIC-2.52□□□□□ -2.81
CCDC43Q96MW1 U2.18-201ENST00000622185 84 ntBASIC-2.52□□□□□ -2.81
CCDC43Q96MW1 MIR630-201ENST00000384957 97 ntBASIC-2.53□□□□□ -2.81
CCDC43Q96MW1 RNY4P18-201ENST00000391107 89 ntBASIC-2.53□□□□□ -2.81
CCDC43Q96MW1 MTND4LP1-201ENST00000446263 157 ntBASIC-2.53□□□□□ -2.81
CCDC43Q96MW1 RNA5SP93-201ENST00000362525 114 ntBASIC-2.54□□□□□ -2.82
CCDC43Q96MW1 RNU6-228P-201ENST00000362700 106 ntBASIC-2.54□□□□□ -2.82
CCDC43Q96MW1 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.54□□□□□ -2.82
CCDC43Q96MW1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.55□□□□□ -2.82
CCDC43Q96MW1 MIR3671-201ENST00000580455 88 ntBASIC-2.55□□□□□ -2.82
CCDC43Q96MW1 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.56□□□□□ -2.82
CCDC43Q96MW1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.56□□□□□ -2.82
CCDC43Q96MW1 RNU6-313P-201ENST00000516317 112 ntBASIC-2.56□□□□□ -2.82
CCDC43Q96MW1 MIR1297-201ENST00000637311 77 ntBASIC-2.56□□□□□ -2.82
CCDC43Q96MW1 MIR488-201ENST00000365739 83 ntBASIC-2.57□□□□□ -2.82
CCDC43Q96MW1 AC006160.2-201ENST00000637708 154 ntBASIC-2.57□□□□□ -2.82
CCDC43Q96MW1 RNA5SP215-201ENST00000363440 122 ntBASIC-2.58□□□□□ -2.82
CCDC43Q96MW1 SNORD116-16-201ENST00000384533 92 ntBASIC-2.58□□□□□ -2.82
CCDC43Q96MW1 MIR3170-201ENST00000582699 77 ntBASIC-2.58□□□□□ -2.82
CCDC43Q96MW1 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.59□□□□□ -2.82
CCDC43Q96MW1 RNU6-668P-201ENST00000364180 107 ntBASIC-2.59□□□□□ -2.82
CCDC43Q96MW1 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.59□□□□□ -2.82
CCDC43Q96MW1 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.6□□□□□ -2.83
CCDC43Q96MW1 MIR548AA1-201ENST00000384971 97 ntBASIC-2.6□□□□□ -2.83
CCDC43Q96MW1 SNORD113-2-201ENST00000391082 72 ntBASIC-2.6□□□□□ -2.83
CCDC43Q96MW1 MIR548M-201ENST00000408260 86 ntBASIC-2.6□□□□□ -2.83
CCDC43Q96MW1 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.6□□□□□ -2.83
CCDC43Q96MW1 MT-TR-201ENST00000387439 65 ntBASIC-2.61□□□□□ -2.83
CCDC43Q96MW1 RNU6-380P-201ENST00000410207 107 ntBASIC-2.61□□□□□ -2.83
CCDC43Q96MW1 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.61□□□□□ -2.83
CCDC43Q96MW1 RNU6-980P-201ENST00000516925 103 ntBASIC-2.61□□□□□ -2.83
CCDC43Q96MW1 SNORD113.1-201ENST00000363280 73 ntBASIC-2.62□□□□□ -2.83
CCDC43Q96MW1 RNU6-695P-201ENST00000391157 104 ntBASIC-2.62□□□□□ -2.83
CCDC43Q96MW1 MIR8053-201ENST00000613344 75 ntBASIC-2.62□□□□□ -2.83
CCDC43Q96MW1 RNU6-675P-201ENST00000384236 104 ntBASIC-2.63□□□□□ -2.83
CCDC43Q96MW1 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.64□□□□□ -2.83
CCDC43Q96MW1 AC120024.2-201ENST00000576526 175 ntBASIC-2.64□□□□□ -2.83
CCDC43Q96MW1 SNORD45A-201ENST00000384512 84 ntBASIC-2.65□□□□□ -2.83
CCDC43Q96MW1 RNU6-844P-201ENST00000517175 102 ntBASIC-2.65□□□□□ -2.83
CCDC43Q96MW1 MIR664A-201ENST00000626086 82 ntBASIC-2.65□□□□□ -2.83
CCDC43Q96MW1 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.66□□□□□ -2.84
CCDC43Q96MW1 RNU6-640P-201ENST00000363693 105 ntBASIC-2.66□□□□□ -2.84
CCDC43Q96MW1 RNA5SP173-201ENST00000364857 136 ntBASIC-2.67□□□□□ -2.84
CCDC43Q96MW1 SNORD1B-201ENST00000363091 84 ntBASIC-2.68□□□□□ -2.84
CCDC43Q96MW1 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.68□□□□□ -2.84
CCDC43Q96MW1 RNU6-563P-201ENST00000364872 108 ntBASIC-2.68□□□□□ -2.84
CCDC43Q96MW1 SNORA41B-201ENST00000384785 128 ntBASIC-2.68□□□□□ -2.84
CCDC43Q96MW1 MIR487B-201ENST00000385021 84 ntBASIC-2.68□□□□□ -2.84
CCDC43Q96MW1 MIR3139-201ENST00000579145 76 ntBASIC-2.68□□□□□ -2.84
CCDC43Q96MW1 RNU6-32P-201ENST00000383948 107 ntBASIC-2.69□□□□□ -2.84
CCDC43Q96MW1 RNU6-13P-201ENST00000384248 107 ntBASIC-2.69□□□□□ -2.84
CCDC43Q96MW1 RNU6-12P-201ENST00000384604 107 ntBASIC-2.69□□□□□ -2.84
CCDC43Q96MW1 RNU6-41P-201ENST00000384741 107 ntBASIC-2.69□□□□□ -2.84
CCDC43Q96MW1 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.7□□□□□ -2.84
CCDC43Q96MW1 RNU6-247P-201ENST00000362636 107 ntBASIC-2.7□□□□□ -2.84
CCDC43Q96MW1 RNU6-755P-201ENST00000364400 103 ntBASIC-2.7□□□□□ -2.84
CCDC43Q96MW1 RNU6-258P-201ENST00000390884 101 ntBASIC-2.7□□□□□ -2.84
CCDC43Q96MW1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.7□□□□□ -2.84
CCDC43Q96MW1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.7□□□□□ -2.84
CCDC43Q96MW1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.7□□□□□ -2.84
CCDC43Q96MW1 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.7□□□□□ -2.84
CCDC43Q96MW1 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.71□□□□□ -2.84
CCDC43Q96MW1 SNORA63.4-201ENST00000362763 126 ntBASIC-2.72□□□□□ -2.84
CCDC43Q96MW1 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.72□□□□□ -2.84
CCDC43Q96MW1 AC108019.1-201ENST00000512540 175 ntBASIC-2.72□□□□□ -2.84
CCDC43Q96MW1 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.73□□□□□ -2.85
CCDC43Q96MW1 MIR4756-201ENST00000577874 78 ntBASIC-2.73□□□□□ -2.85
CCDC43Q96MW1 MIR3123-201ENST00000583417 75 ntBASIC-2.74□□□□□ -2.85
CCDC43Q96MW1 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.75□□□□□ -2.85
CCDC43Q96MW1 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.75□□□□□ -2.85
CCDC43Q96MW1 IGLL4P-201ENST00000614590 133 ntBASIC-2.75□□□□□ -2.85
CCDC43Q96MW1 RNU6-315P-201ENST00000362666 107 ntBASIC-2.76□□□□□ -2.85
CCDC43Q96MW1 RNU6-841P-201ENST00000383872 107 ntBASIC-2.76□□□□□ -2.85
CCDC43Q96MW1 RNU6-147P-201ENST00000383983 107 ntBASIC-2.76□□□□□ -2.85
CCDC43Q96MW1 RNU6-995P-201ENST00000391244 107 ntBASIC-2.76□□□□□ -2.85
CCDC43Q96MW1 RNY4-201ENST00000516507 96 ntBASIC-2.76□□□□□ -2.85
CCDC43Q96MW1 MIR3910-1-201ENST00000580936 111 ntBASIC-2.76□□□□□ -2.85
CCDC43Q96MW1 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.76□□□□□ -2.85
CCDC43Q96MW1 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.77□□□□□ -2.85
CCDC43Q96MW1 MT-TM-201ENST00000387377 68 ntBASIC-2.77□□□□□ -2.85
CCDC43Q96MW1 MIR664B-201ENST00000626756 61 ntBASIC-2.77□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms