Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.63□□□□□ -2.83
CLHC1Q8NHS4 MTND4LP1-201ENST00000446263 157 ntBASIC-2.64□□□□□ -2.83
CLHC1Q8NHS4 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.64□□□□□ -2.83
CLHC1Q8NHS4 MIR2052-201ENST00000636055 55 ntBASIC-2.64□□□□□ -2.83
CLHC1Q8NHS4 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.65□□□□□ -2.83
CLHC1Q8NHS4 MIR3123-201ENST00000583417 75 ntBASIC-2.65□□□□□ -2.83
CLHC1Q8NHS4 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.66□□□□□ -2.84
CLHC1Q8NHS4 SNORD113-2-201ENST00000391082 72 ntBASIC-2.66□□□□□ -2.84
CLHC1Q8NHS4 RNU6-563P-201ENST00000364872 108 ntBASIC-2.67□□□□□ -2.84
CLHC1Q8NHS4 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.68□□□□□ -2.84
CLHC1Q8NHS4 MIR630-201ENST00000384957 97 ntBASIC-2.68□□□□□ -2.84
CLHC1Q8NHS4 RNY4-201ENST00000516507 96 ntBASIC-2.68□□□□□ -2.84
CLHC1Q8NHS4 MIR1297-201ENST00000637311 77 ntBASIC-2.68□□□□□ -2.84
CLHC1Q8NHS4 RNU6-219P-201ENST00000364728 107 ntBASIC-2.69□□□□□ -2.84
CLHC1Q8NHS4 SNORD116-22-201ENST00000384430 92 ntBASIC-2.69□□□□□ -2.84
CLHC1Q8NHS4 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.69□□□□□ -2.84
CLHC1Q8NHS4 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.7□□□□□ -2.84
CLHC1Q8NHS4 RNA5SP173-201ENST00000364857 136 ntBASIC-2.71□□□□□ -2.84
CLHC1Q8NHS4 MIR4756-201ENST00000577874 78 ntBASIC-2.71□□□□□ -2.84
CLHC1Q8NHS4 MIR548AM-201ENST00000584298 74 ntBASIC-2.71□□□□□ -2.84
CLHC1Q8NHS4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.71□□□□□ -2.84
CLHC1Q8NHS4 MIR8053-201ENST00000613344 75 ntBASIC-2.71□□□□□ -2.84
CLHC1Q8NHS4 RNU6-247P-201ENST00000362636 107 ntBASIC-2.72□□□□□ -2.84
CLHC1Q8NHS4 RNU6-258P-201ENST00000390884 101 ntBASIC-2.72□□□□□ -2.84
CLHC1Q8NHS4 RNU6-129P-201ENST00000391022 107 ntBASIC-2.72□□□□□ -2.84
CLHC1Q8NHS4 MIR3139-201ENST00000579145 76 ntBASIC-2.72□□□□□ -2.84
CLHC1Q8NHS4 MIR548BB-201ENST00000626714 66 ntBASIC-2.72□□□□□ -2.84
CLHC1Q8NHS4 RNU6-668P-201ENST00000364180 107 ntBASIC-2.73□□□□□ -2.85
CLHC1Q8NHS4 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.73□□□□□ -2.85
CLHC1Q8NHS4 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.73□□□□□ -2.85
CLHC1Q8NHS4 RNU6-402P-201ENST00000410678 103 ntBASIC-2.74□□□□□ -2.85
CLHC1Q8NHS4 SNORD1B-201ENST00000363091 84 ntBASIC-2.75□□□□□ -2.85
CLHC1Q8NHS4 RNU6-589P-201ENST00000516485 107 ntBASIC-2.75□□□□□ -2.85
CLHC1Q8NHS4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.75□□□□□ -2.85
CLHC1Q8NHS4 SNORD113.1-201ENST00000363280 73 ntBASIC-2.76□□□□□ -2.85
CLHC1Q8NHS4 SNORA27.2-201ENST00000363365 126 ntBASIC-2.76□□□□□ -2.85
CLHC1Q8NHS4 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.76□□□□□ -2.85
CLHC1Q8NHS4 SNORA41B-201ENST00000384785 128 ntBASIC-2.76□□□□□ -2.85
CLHC1Q8NHS4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.76□□□□□ -2.85
CLHC1Q8NHS4 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.76□□□□□ -2.85
CLHC1Q8NHS4 MIR664B-201ENST00000626756 61 ntBASIC-2.76□□□□□ -2.85
CLHC1Q8NHS4 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.77□□□□□ -2.85
CLHC1Q8NHS4 RNY4P18-201ENST00000391107 89 ntBASIC-2.78□□□□□ -2.85
CLHC1Q8NHS4 RNU6-995P-201ENST00000391244 107 ntBASIC-2.78□□□□□ -2.85
CLHC1Q8NHS4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.78□□□□□ -2.85
CLHC1Q8NHS4 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.79□□□□□ -2.86
CLHC1Q8NHS4 AC008267.6-201ENST00000441664 139 ntBASIC-2.79□□□□□ -2.86
CLHC1Q8NHS4 RNU6-267P-201ENST00000516714 103 ntBASIC-2.79□□□□□ -2.86
CLHC1Q8NHS4 RNU6-380P-201ENST00000410207 107 ntBASIC-2.8□□□□□ -2.86
CLHC1Q8NHS4 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.8□□□□□ -2.86
CLHC1Q8NHS4 RNU6-834P-201ENST00000362367 110 ntBASIC-2.81□□□□□ -2.86
CLHC1Q8NHS4 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.81□□□□□ -2.86
CLHC1Q8NHS4 MT-TM-201ENST00000387377 68 ntBASIC-2.81□□□□□ -2.86
CLHC1Q8NHS4 RNU7-151P-201ENST00000516930 53 ntBASIC-2.81□□□□□ -2.86
CLHC1Q8NHS4 MIR4484-201ENST00000582855 83 ntBASIC-2.81□□□□□ -2.86
CLHC1Q8NHS4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.81□□□□□ -2.86
CLHC1Q8NHS4 RNU6-755P-201ENST00000364400 103 ntBASIC-2.82□□□□□ -2.86
CLHC1Q8NHS4 RNU6-959P-201ENST00000384671 107 ntBASIC-2.82□□□□□ -2.86
CLHC1Q8NHS4 MALAT1.1-201ENST00000618249 95 ntBASIC-2.82□□□□□ -2.86
CLHC1Q8NHS4 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.82□□□□□ -2.86
CLHC1Q8NHS4 SNORA63.4-201ENST00000362763 126 ntBASIC-2.83□□□□□ -2.86
CLHC1Q8NHS4 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.83□□□□□ -2.86
CLHC1Q8NHS4 RNU6-669P-201ENST00000365575 107 ntBASIC-2.84□□□□□ -2.86
CLHC1Q8NHS4 AC005520.4-201ENST00000604337 90 ntBASIC-2.84□□□□□ -2.86
CLHC1Q8NHS4 AC013734.1-201ENST00000619329 111 ntBASIC-2.84□□□□□ -2.86
CLHC1Q8NHS4 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.85□□□□□ -2.87
CLHC1Q8NHS4 RNU4-88P-201ENST00000411220 86 ntBASIC-2.85□□□□□ -2.87
CLHC1Q8NHS4 MIR7978-201ENST00000636158 59 ntBASIC-2.85□□□□□ -2.87
CLHC1Q8NHS4 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.86□□□□□ -2.87
CLHC1Q8NHS4 MIR125B1-201ENST00000385236 88 ntBASIC-2.86□□□□□ -2.87
CLHC1Q8NHS4 SNORD63.2-201ENST00000516303 64 ntBASIC-2.86□□□□□ -2.87
CLHC1Q8NHS4 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.86□□□□□ -2.87
CLHC1Q8NHS4 AP001318.4-201ENST00000616637 121 ntBASIC-2.86□□□□□ -2.87
CLHC1Q8NHS4 RNU6-675P-201ENST00000384236 104 ntBASIC-2.87□□□□□ -2.87
CLHC1Q8NHS4 SNORD45A-201ENST00000384512 84 ntBASIC-2.87□□□□□ -2.87
CLHC1Q8NHS4 AL031737.1-201ENST00000450125 223 ntBASIC-2.87□□□□□ -2.87
CLHC1Q8NHS4 SNORA40.13-201ENST00000516379 120 ntBASIC-2.87□□□□□ -2.87
CLHC1Q8NHS4 AC006160.2-201ENST00000637708 154 ntBASIC-2.87□□□□□ -2.87
CLHC1Q8NHS4 RNU6-523P-201ENST00000516304 54 ntBASIC-2.88□□□□□ -2.87
CLHC1Q8NHS4 RNU6-172P-201ENST00000411000 93 ntBASIC-2.89□□□□□ -2.87
CLHC1Q8NHS4 MIR4719-201ENST00000585233 84 ntBASIC-2.89□□□□□ -2.87
CLHC1Q8NHS4 RNU6-315P-201ENST00000362666 107 ntBASIC-2.9□□□□□ -2.87
CLHC1Q8NHS4 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.9□□□□□ -2.87
CLHC1Q8NHS4 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.9□□□□□ -2.87
CLHC1Q8NHS4 MIR3133-201ENST00000583157 78 ntBASIC-2.92□□□□□ -2.88
CLHC1Q8NHS4 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.92□□□□□ -2.88
CLHC1Q8NHS4 AL365222.1-201ENST00000614661 98 ntBASIC-2.92□□□□□ -2.88
CLHC1Q8NHS4 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.93□□□□□ -2.88
CLHC1Q8NHS4 MIR579-201ENST00000385221 98 ntBASIC-2.93□□□□□ -2.88
CLHC1Q8NHS4 MIR450A1-201ENST00000362262 91 ntBASIC-2.94□□□□□ -2.88
CLHC1Q8NHS4 RNA5SP405-201ENST00000363059 114 ntBASIC-2.94□□□□□ -2.88
CLHC1Q8NHS4 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.94□□□□□ -2.88
CLHC1Q8NHS4 AC099654.10-201ENST00000640395 161 ntBASIC-2.94□□□□□ -2.88
CLHC1Q8NHS4 SNORD18C-201ENST00000362704 69 ntBASIC-2.95□□□□□ -2.88
CLHC1Q8NHS4 RNU6-194P-201ENST00000363862 105 ntBASIC-2.95□□□□□ -2.88
CLHC1Q8NHS4 RNU6-81P-201ENST00000365608 104 ntBASIC-2.95□□□□□ -2.88
CLHC1Q8NHS4 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.95□□□□□ -2.88
CLHC1Q8NHS4 MIR664A-201ENST00000626086 82 ntBASIC-2.95□□□□□ -2.88
CLHC1Q8NHS4 U6.97-201ENST00000636904 101 ntBASIC-2.95□□□□□ -2.88
CLHC1Q8NHS4 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.96□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms