Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 RNU6-24P-201ENST00000384440 107 ntBASIC-1.59□□□□□ -2.66
CCDC197Q8NCU1 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.59□□□□□ -2.66
CCDC197Q8NCU1 RNA5SP476-201ENST00000516613 103 ntBASIC-1.59□□□□□ -2.66
CCDC197Q8NCU1 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.59□□□□□ -2.66
CCDC197Q8NCU1 MIR494-201ENST00000349529 81 ntBASIC-1.6□□□□□ -2.67
CCDC197Q8NCU1 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.6□□□□□ -2.67
CCDC197Q8NCU1 SNORD113-2-201ENST00000391082 72 ntBASIC-1.6□□□□□ -2.67
CCDC197Q8NCU1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.6□□□□□ -2.67
CCDC197Q8NCU1 MIR4306-201ENST00000583390 91 ntBASIC-1.6□□□□□ -2.67
CCDC197Q8NCU1 RNU6-598P-201ENST00000364017 105 ntBASIC-1.61□□□□□ -2.67
CCDC197Q8NCU1 MIR450A2-201ENST00000385022 100 ntBASIC-1.61□□□□□ -2.67
CCDC197Q8NCU1 RNU6-242P-201ENST00000384359 107 ntBASIC-1.62□□□□□ -2.67
CCDC197Q8NCU1 HAR1A.1-201ENST00000459583 118 ntBASIC-1.62□□□□□ -2.67
CCDC197Q8NCU1 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.63□□□□□ -2.67
CCDC197Q8NCU1 RNU6-164P-201ENST00000364604 103 ntBASIC-1.63□□□□□ -2.67
CCDC197Q8NCU1 RNA5SP173-201ENST00000364857 136 ntBASIC-1.63□□□□□ -2.67
CCDC197Q8NCU1 SNORD116-16-201ENST00000384533 92 ntBASIC-1.63□□□□□ -2.67
CCDC197Q8NCU1 RPL35AP4-201ENST00000412007 102 ntBASIC-1.63□□□□□ -2.67
CCDC197Q8NCU1 RNU6-70P-201ENST00000516438 60 ntBASIC-1.63□□□□□ -2.67
CCDC197Q8NCU1 RNU6-294P-201ENST00000364999 102 ntBASIC-1.64□□□□□ -2.67
CCDC197Q8NCU1 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.64□□□□□ -2.67
CCDC197Q8NCU1 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.65□□□□□ -2.67
CCDC197Q8NCU1 MIR154-201ENST00000385243 84 ntBASIC-1.65□□□□□ -2.67
CCDC197Q8NCU1 MIR4666B-201ENST00000578142 81 ntBASIC-1.65□□□□□ -2.67
CCDC197Q8NCU1 MIR409-201ENST00000362237 79 ntBASIC-1.66□□□□□ -2.68
CCDC197Q8NCU1 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.66□□□□□ -2.68
CCDC197Q8NCU1 RNA5SP192-201ENST00000364404 120 ntBASIC-1.66□□□□□ -2.68
CCDC197Q8NCU1 AC090616.4-201ENST00000448026 115 ntBASIC-1.66□□□□□ -2.68
CCDC197Q8NCU1 U2.18-201ENST00000622185 84 ntBASIC-1.66□□□□□ -2.68
CCDC197Q8NCU1 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.67□□□□□ -2.68
CCDC197Q8NCU1 SNORD116-24-201ENST00000384549 92 ntBASIC-1.67□□□□□ -2.68
CCDC197Q8NCU1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.67□□□□□ -2.68
CCDC197Q8NCU1 MIR3115-201ENST00000577915 68 ntBASIC-1.67□□□□□ -2.68
CCDC197Q8NCU1 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.67□□□□□ -2.68
CCDC197Q8NCU1 MIR4320-201ENST00000636981 65 ntBASIC-1.67□□□□□ -2.68
CCDC197Q8NCU1 RNU6-895P-201ENST00000384125 103 ntBASIC-1.69□□□□□ -2.68
CCDC197Q8NCU1 SNORA41B-201ENST00000384785 128 ntBASIC-1.69□□□□□ -2.68
CCDC197Q8NCU1 AC091912.2-201ENST00000624798 167 ntBASIC-1.69□□□□□ -2.68
CCDC197Q8NCU1 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.7□□□□□ -2.68
CCDC197Q8NCU1 MIR3134-201ENST00000579433 74 ntBASIC-1.7□□□□□ -2.68
CCDC197Q8NCU1 MIR3165-201ENST00000579874 75 ntBASIC-1.7□□□□□ -2.68
CCDC197Q8NCU1 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.71□□□□□ -2.68
CCDC197Q8NCU1 MIR520D-201ENST00000385002 87 ntBASIC-1.71□□□□□ -2.68
CCDC197Q8NCU1 MIR5582-201ENST00000579697 68 ntBASIC-1.71□□□□□ -2.68
CCDC197Q8NCU1 SNORD115-31-201ENST00000365318 82 ntBASIC-1.72□□□□□ -2.68
CCDC197Q8NCU1 RNU6-608P-201ENST00000383927 104 ntBASIC-1.72□□□□□ -2.68
CCDC197Q8NCU1 RNA5SP266-201ENST00000410273 108 ntBASIC-1.72□□□□□ -2.68
CCDC197Q8NCU1 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.73□□□□□ -2.69
CCDC197Q8NCU1 SNORD1B-201ENST00000363091 84 ntBASIC-1.73□□□□□ -2.69
CCDC197Q8NCU1 RNU6-787P-201ENST00000384032 107 ntBASIC-1.73□□□□□ -2.69
CCDC197Q8NCU1 MIR548AA1-201ENST00000384971 97 ntBASIC-1.73□□□□□ -2.69
CCDC197Q8NCU1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.73□□□□□ -2.69
CCDC197Q8NCU1 RNU6-820P-201ENST00000384273 107 ntBASIC-1.74□□□□□ -2.69
CCDC197Q8NCU1 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.74□□□□□ -2.69
CCDC197Q8NCU1 RNU6-687P-201ENST00000516443 89 ntBASIC-1.74□□□□□ -2.69
CCDC197Q8NCU1 MIR8485-201ENST00000401372 91 ntBASIC-1.75□□□□□ -2.69
CCDC197Q8NCU1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.75□□□□□ -2.69
CCDC197Q8NCU1 AC138207.3-201ENST00000585289 166 ntBASIC-1.75□□□□□ -2.69
CCDC197Q8NCU1 MIR6874-201ENST00000635894 71 ntBASIC-1.75□□□□□ -2.69
CCDC197Q8NCU1 MIR889-201ENST00000401280 79 ntBASIC-1.76□□□□□ -2.69
CCDC197Q8NCU1 MIR3170-201ENST00000582699 77 ntBASIC-1.77□□□□□ -2.69
CCDC197Q8NCU1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.77□□□□□ -2.69
CCDC197Q8NCU1 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.78□□□□□ -2.69
CCDC197Q8NCU1 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.78□□□□□ -2.69
CCDC197Q8NCU1 AC018880.2-201ENST00000414265 201 ntBASIC-1.78□□□□□ -2.69
CCDC197Q8NCU1 RNU6-706P-201ENST00000517229 104 ntBASIC-1.78□□□□□ -2.69
CCDC197Q8NCU1 AC062037.1-201ENST00000605302 128 ntBASIC-1.78□□□□□ -2.69
CCDC197Q8NCU1 RNU6-411P-201ENST00000384451 107 ntBASIC-1.79□□□□□ -2.7
CCDC197Q8NCU1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.79□□□□□ -2.7
CCDC197Q8NCU1 RNU6-542P-201ENST00000516405 103 ntBASIC-1.8□□□□□ -2.7
CCDC197Q8NCU1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.81□□□□□ -2.7
CCDC197Q8NCU1 MIR6502-201ENST00000617296 76 ntBASIC-1.82□□□□□ -2.7
CCDC197Q8NCU1 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.83□□□□□ -2.7
CCDC197Q8NCU1 MIR23C-201ENST00000579846 100 ntBASIC-1.83□□□□□ -2.7
CCDC197Q8NCU1 U7.4-201ENST00000614961 63 ntBASIC-1.83□□□□□ -2.7
CCDC197Q8NCU1 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.84□□□□□ -2.7
CCDC197Q8NCU1 RNU6-79P-201ENST00000362511 107 ntBASIC-1.85□□□□□ -2.71
CCDC197Q8NCU1 RNU6-995P-201ENST00000391244 107 ntBASIC-1.85□□□□□ -2.71
CCDC197Q8NCU1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.85□□□□□ -2.71
CCDC197Q8NCU1 RNU6-247P-201ENST00000362636 107 ntBASIC-1.86□□□□□ -2.71
CCDC197Q8NCU1 RNU6-400P-201ENST00000391173 106 ntBASIC-1.86□□□□□ -2.71
CCDC197Q8NCU1 RNU6-172P-201ENST00000411000 93 ntBASIC-1.86□□□□□ -2.71
CCDC197Q8NCU1 RNU7-151P-201ENST00000516930 53 ntBASIC-1.86□□□□□ -2.71
CCDC197Q8NCU1 RNU6-92P-201ENST00000605893 104 ntBASIC-1.86□□□□□ -2.71
CCDC197Q8NCU1 RNU6-634P-201ENST00000459134 106 ntBASIC-1.87□□□□□ -2.71
CCDC197Q8NCU1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.88□□□□□ -2.71
CCDC197Q8NCU1 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.88□□□□□ -2.71
CCDC197Q8NCU1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.89□□□□□ -2.71
CCDC197Q8NCU1 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.9□□□□□ -2.71
CCDC197Q8NCU1 MIR4520-1-201ENST00000582609 70 ntBASIC-1.9□□□□□ -2.71
CCDC197Q8NCU1 MIR7978-201ENST00000636158 59 ntBASIC-1.9□□□□□ -2.71
CCDC197Q8NCU1 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.91□□□□□ -2.72
CCDC197Q8NCU1 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.91□□□□□ -2.72
CCDC197Q8NCU1 MIR579-201ENST00000385221 98 ntBASIC-1.91□□□□□ -2.72
CCDC197Q8NCU1 SNX3P1X-201ENST00000414887 175 ntBASIC-1.91□□□□□ -2.72
CCDC197Q8NCU1 MIR3202-2-201ENST00000635980 79 ntBASIC-1.91□□□□□ -2.72
CCDC197Q8NCU1 RNU6-540P-201ENST00000384622 101 ntBASIC-1.92□□□□□ -2.72
CCDC197Q8NCU1 RNA5SP170-201ENST00000517150 101 ntBASIC-1.92□□□□□ -2.72
CCDC197Q8NCU1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.92□□□□□ -2.72
CCDC197Q8NCU1 MIR125B1-201ENST00000385236 88 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms