Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 MIR4802-201ENST00000581881 80 ntBASIC-0.51□□□□□ -2.49
VPS53Q5VIR6 MIR196A2-201ENST00000385189 110 ntBASIC-0.52□□□□□ -2.49
VPS53Q5VIR6 RNU6-284P-201ENST00000411105 106 ntBASIC-0.52□□□□□ -2.49
VPS53Q5VIR6 RNU6-122P-201ENST00000516818 107 ntBASIC-0.52□□□□□ -2.49
VPS53Q5VIR6 MIR8064-201ENST00000612863 90 ntBASIC-0.52□□□□□ -2.49
VPS53Q5VIR6 U7.5-201ENST00000517224 61 ntBASIC-0.53□□□□□ -2.49
VPS53Q5VIR6 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.54□□□□□ -2.5
VPS53Q5VIR6 RNA5SP275-201ENST00000363936 118 ntBASIC-0.54□□□□□ -2.5
VPS53Q5VIR6 RNA5SP192-201ENST00000364404 120 ntBASIC-0.54□□□□□ -2.5
VPS53Q5VIR6 AP000533.3-201ENST00000447704 118 ntBASIC-0.54□□□□□ -2.5
VPS53Q5VIR6 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.55□□□□□ -2.5
VPS53Q5VIR6 RNU6-940P-201ENST00000363433 104 ntBASIC-0.55□□□□□ -2.5
VPS53Q5VIR6 SNORD114-28-201ENST00000363610 72 ntBASIC-0.55□□□□□ -2.5
VPS53Q5VIR6 RNU6-669P-201ENST00000365575 107 ntBASIC-0.55□□□□□ -2.5
VPS53Q5VIR6 RNU6-696P-201ENST00000390834 107 ntBASIC-0.55□□□□□ -2.5
VPS53Q5VIR6 RNU6-721P-201ENST00000410155 105 ntBASIC-0.55□□□□□ -2.5
VPS53Q5VIR6 AC110620.1-201ENST00000416042 228 ntBASIC-0.55□□□□□ -2.5
VPS53Q5VIR6 AC139453.2-201ENST00000487255 133 ntBASIC-0.56□□□□□ -2.5
VPS53Q5VIR6 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.56□□□□□ -2.5
VPS53Q5VIR6 RNU7-88P-201ENST00000458752 63 ntBASIC-0.57□□□□□ -2.5
VPS53Q5VIR6 RNU6-732P-201ENST00000516033 103 ntBASIC-0.57□□□□□ -2.5
VPS53Q5VIR6 RNU6-598P-201ENST00000364017 105 ntBASIC-0.58□□□□□ -2.5
VPS53Q5VIR6 SNORA3B-201ENST00000391305 131 ntBASIC-0.58□□□□□ -2.5
VPS53Q5VIR6 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.58□□□□□ -2.5
VPS53Q5VIR6 MIR5589-201ENST00000579442 60 ntBASIC-0.58□□□□□ -2.5
VPS53Q5VIR6 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.59□□□□□ -2.5
VPS53Q5VIR6 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.59□□□□□ -2.5
VPS53Q5VIR6 SNORD1B-201ENST00000363091 84 ntBASIC-0.6□□□□□ -2.51
VPS53Q5VIR6 SNORA26.4-201ENST00000391188 123 ntBASIC-0.6□□□□□ -2.51
VPS53Q5VIR6 MIR1265-201ENST00000408444 86 ntBASIC-0.6□□□□□ -2.51
VPS53Q5VIR6 MIR4636-201ENST00000582271 80 ntBASIC-0.6□□□□□ -2.51
VPS53Q5VIR6 SNORD115-33-201ENST00000363723 82 ntBASIC-0.61□□□□□ -2.51
VPS53Q5VIR6 AP001180.6-201ENST00000584918 159 ntBASIC-0.61□□□□□ -2.51
VPS53Q5VIR6 SNORD57-201ENST00000448188 72 ntBASIC-0.62□□□□□ -2.51
VPS53Q5VIR6 AC125388.1-201ENST00000459631 156 ntBASIC-0.62□□□□□ -2.51
VPS53Q5VIR6 SNORD114-17-201ENST00000364699 75 ntBASIC-0.63□□□□□ -2.51
VPS53Q5VIR6 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.63□□□□□ -2.51
VPS53Q5VIR6 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.63□□□□□ -2.51
VPS53Q5VIR6 SNORD63.1-201ENST00000516178 80 ntBASIC-0.63□□□□□ -2.51
VPS53Q5VIR6 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
VPS53Q5VIR6 Z95118.1-201ENST00000421372 247 ntBASIC-0.64□□□□□ -2.51
VPS53Q5VIR6 MIR466-201ENST00000580653 84 ntBASIC-0.65□□□□□ -2.51
VPS53Q5VIR6 MIR548AZ-201ENST00000616567 95 ntBASIC-0.65□□□□□ -2.51
VPS53Q5VIR6 SNORA32.3-201ENST00000384772 121 ntBASIC-0.66□□□□□ -2.52
VPS53Q5VIR6 MIR548AA1-201ENST00000384971 97 ntBASIC-0.66□□□□□ -2.52
VPS53Q5VIR6 RNA5SP451-201ENST00000410588 110 ntBASIC-0.66□□□□□ -2.52
VPS53Q5VIR6 U2.18-201ENST00000622185 84 ntBASIC-0.66□□□□□ -2.52
VPS53Q5VIR6 RNU6-172P-201ENST00000411000 93 ntBASIC-0.67□□□□□ -2.52
VPS53Q5VIR6 AL353691.2-201ENST00000443795 59 ntBASIC-0.67□□□□□ -2.52
VPS53Q5VIR6 MIR4436A-201ENST00000585278 85 ntBASIC-0.67□□□□□ -2.52
VPS53Q5VIR6 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.67□□□□□ -2.52
VPS53Q5VIR6 RNU6-231P-201ENST00000517122 103 ntBASIC-0.68□□□□□ -2.52
VPS53Q5VIR6 MIR3938-201ENST00000582157 103 ntBASIC-0.68□□□□□ -2.52
VPS53Q5VIR6 MIR101-1-201ENST00000362265 75 ntBASIC-0.69□□□□□ -2.52
VPS53Q5VIR6 SNORD19-201ENST00000391191 68 ntBASIC-0.69□□□□□ -2.52
VPS53Q5VIR6 MIR4493-201ENST00000584016 73 ntBASIC-0.69□□□□□ -2.52
VPS53Q5VIR6 MIR7110-201ENST00000612638 86 ntBASIC-0.69□□□□□ -2.52
VPS53Q5VIR6 RNU7-119P-201ENST00000459279 63 ntBASIC-0.7□□□□□ -2.52
VPS53Q5VIR6 RNU6-35P-201ENST00000384530 107 ntBASIC-0.72□□□□□ -2.52
VPS53Q5VIR6 MIR604-201ENST00000384880 94 ntBASIC-0.72□□□□□ -2.52
VPS53Q5VIR6 RNU6-758P-201ENST00000516292 89 ntBASIC-0.72□□□□□ -2.52
VPS53Q5VIR6 RNU6-520P-201ENST00000384717 104 ntBASIC-0.73□□□□□ -2.53
VPS53Q5VIR6 MIR147A-201ENST00000385079 72 ntBASIC-0.73□□□□□ -2.53
VPS53Q5VIR6 RNU6-788P-201ENST00000390967 104 ntBASIC-0.73□□□□□ -2.53
VPS53Q5VIR6 RNU6-995P-201ENST00000391244 107 ntBASIC-0.73□□□□□ -2.53
VPS53Q5VIR6 MIR548Q-201ENST00000408404 100 ntBASIC-0.74□□□□□ -2.53
VPS53Q5VIR6 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.74□□□□□ -2.53
VPS53Q5VIR6 MIR5683-201ENST00000636514 76 ntBASIC-0.74□□□□□ -2.53
VPS53Q5VIR6 RPS29P8-201ENST00000445109 171 ntBASIC-0.75□□□□□ -2.53
VPS53Q5VIR6 RNU7-160P-201ENST00000516660 62 ntBASIC-0.75□□□□□ -2.53
VPS53Q5VIR6 RNU7-151P-201ENST00000516930 53 ntBASIC-0.75□□□□□ -2.53
VPS53Q5VIR6 MIR7978-201ENST00000636158 59 ntBASIC-0.77□□□□□ -2.53
VPS53Q5VIR6 SNORD116.2-201ENST00000391251 93 ntBASIC-0.78□□□□□ -2.53
VPS53Q5VIR6 AP002795.1-201ENST00000534879 84 ntBASIC-0.78□□□□□ -2.53
VPS53Q5VIR6 RNU6-431P-201ENST00000383874 107 ntBASIC-0.79□□□□□ -2.54
VPS53Q5VIR6 MIR4490-201ENST00000582647 84 ntBASIC-0.79□□□□□ -2.54
VPS53Q5VIR6 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.8□□□□□ -2.54
VPS53Q5VIR6 MIR579-201ENST00000385221 98 ntBASIC-0.8□□□□□ -2.54
VPS53Q5VIR6 MIR125B1-201ENST00000385236 88 ntBASIC-0.8□□□□□ -2.54
VPS53Q5VIR6 SNORA40B-201ENST00000385573 128 ntBASIC-0.8□□□□□ -2.54
VPS53Q5VIR6 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.8□□□□□ -2.54
VPS53Q5VIR6 MIR3170-201ENST00000582699 77 ntBASIC-0.8□□□□□ -2.54
VPS53Q5VIR6 RNU6-810P-201ENST00000364001 107 ntBASIC-0.81□□□□□ -2.54
VPS53Q5VIR6 MIR224-201ENST00000384889 81 ntBASIC-0.81□□□□□ -2.54
VPS53Q5VIR6 SNORD64-201ENST00000386683 67 ntBASIC-0.82□□□□□ -2.54
VPS53Q5VIR6 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
VPS53Q5VIR6 RNA5SP25-201ENST00000410815 110 ntBASIC-0.82□□□□□ -2.54
VPS53Q5VIR6 SNORA40.16-201ENST00000517238 121 ntBASIC-0.82□□□□□ -2.54
VPS53Q5VIR6 RNA5SP368-201ENST00000364298 116 ntBASIC-0.85□□□□□ -2.55
VPS53Q5VIR6 MIR3681-201ENST00000580089 72 ntBASIC-0.85□□□□□ -2.55
VPS53Q5VIR6 RNU6-247P-201ENST00000362636 107 ntBASIC-0.86□□□□□ -2.55
VPS53Q5VIR6 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.86□□□□□ -2.55
VPS53Q5VIR6 MIR520D-201ENST00000385002 87 ntBASIC-0.86□□□□□ -2.55
VPS53Q5VIR6 SNORD114-25-201ENST00000363742 72 ntBASIC-0.87□□□□□ -2.55
VPS53Q5VIR6 MIR507-201ENST00000385234 94 ntBASIC-0.87□□□□□ -2.55
VPS53Q5VIR6 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.87□□□□□ -2.55
VPS53Q5VIR6 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.87□□□□□ -2.55
VPS53Q5VIR6 MIR382-201ENST00000637119 76 ntBASIC-0.87□□□□□ -2.55
VPS53Q5VIR6 RNU6-828P-201ENST00000364876 107 ntBASIC-0.88□□□□□ -2.55
VPS53Q5VIR6 MIR29B1-201ENST00000385015 81 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms