Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 RNU6-940P-201ENST00000363433 104 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 RNU6-686P-201ENST00000364839 107 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 RNY3P1-201ENST00000365085 102 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 MIR154-201ENST00000385243 84 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 RNU6-644P-201ENST00000391155 98 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 MIR4282-201ENST00000583613 67 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 U7.3-201ENST00000616123 62 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 SNORA27.2-201ENST00000363365 126 ntBASIC-1.11□□□□□ -2.59
ABCA4P78363 RNU6-810P-201ENST00000364001 107 ntBASIC-1.11□□□□□ -2.59
ABCA4P78363 RNU6-211P-201ENST00000384047 107 ntBASIC-1.11□□□□□ -2.59
ABCA4P78363 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.11□□□□□ -2.59
ABCA4P78363 SNORA17.4-201ENST00000391287 132 ntBASIC-1.11□□□□□ -2.59
ABCA4P78363 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.11□□□□□ -2.59
ABCA4P78363 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.11□□□□□ -2.59
ABCA4P78363 RNU6-822P-201ENST00000362707 106 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 RNU6-979P-201ENST00000383896 107 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 RNU6-520P-201ENST00000384717 104 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 RNU6-808P-201ENST00000391233 108 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 MIR1252-201ENST00000408861 65 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 MTATP8P2-201ENST00000435212 202 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.12□□□□□ -2.59
ABCA4P78363 RNU6-426P-201ENST00000516464 97 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 MIR548AI-201ENST00000579940 88 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 AL353621.2-201ENST00000605340 133 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 SNORD58C-201ENST00000365223 64 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 RNU6-411P-201ENST00000384451 107 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 RNA5SP136-201ENST00000410906 107 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 RNU6-557P-201ENST00000516842 110 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 AC022559.1-201ENST00000520905 205 ntBASIC-1.12□□□□□ -2.59
ABCA4P78363 MIR656-201ENST00000385224 78 ntBASIC-1.13□□□□□ -2.59
ABCA4P78363 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.13□□□□□ -2.59
ABCA4P78363 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.13□□□□□ -2.59
ABCA4P78363 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.13□□□□□ -2.59
ABCA4P78363 RNY4P18-201ENST00000391107 89 ntBASIC-1.13□□□□□ -2.59
ABCA4P78363 RNU6-70P-201ENST00000516438 60 ntBASIC-1.13□□□□□ -2.59
ABCA4P78363 RNU6-379P-201ENST00000363813 104 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 MIR1236-201ENST00000408340 102 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 MTND4P29-201ENST00000503122 1372 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 RNU6-828P-201ENST00000364876 107 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 RNU6-787P-201ENST00000384032 107 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 MIR363-201ENST00000384840 75 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 RNU6-907P-201ENST00000390924 102 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 RNU6-663P-201ENST00000391105 106 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 AC078883.4-201ENST00000623218 367 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 MIR2052-201ENST00000636055 55 ntBASIC-1.14□□□□□ -2.59
ABCA4P78363 RNU6-755P-201ENST00000364400 103 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 SNORD45C-201ENST00000383893 79 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 SNORD60-201ENST00000383903 83 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.15□□□□□ -2.59
ABCA4P78363 MIR3974-201ENST00000637126 96 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 SNORD42.2-201ENST00000365570 69 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 MIR3688-2-201ENST00000636963 87 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 MIR4317-201ENST00000637586 65 ntBASIC-1.15□□□□□ -2.59
ABCA4P78363 SNORA25.5-201ENST00000363782 126 ntBASIC-1.16□□□□□ -2.6
ABCA4P78363 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.16□□□□□ -2.6
ABCA4P78363 SCARNA23-201ENST00000516060 130 ntBASIC-1.16□□□□□ -2.6
ABCA4P78363 AC139792.2-201ENST00000624218 587 ntBASIC-1.16□□□□□ -2.6
ABCA4P78363 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.17□□□□□ -2.6
ABCA4P78363 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.17□□□□□ -2.6
ABCA4P78363 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.17□□□□□ -2.6
ABCA4P78363 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.17□□□□□ -2.6
ABCA4P78363 RNU6-326P-201ENST00000365480 107 ntBASIC-1.17□□□□□ -2.6
ABCA4P78363 RNY4P13-201ENST00000384284 96 ntBASIC-1.17□□□□□ -2.6
ABCA4P78363 MIR590-201ENST00000385008 97 ntBASIC-1.17□□□□□ -2.6
ABCA4P78363 RNU6-789P-201ENST00000517105 102 ntBASIC-1.17□□□□□ -2.6
ABCA4P78363 MIR4484-201ENST00000582855 83 ntBASIC-1.17□□□□□ -2.6
ABCA4P78363 MIR8053-201ENST00000613344 75 ntBASIC-1.17□□□□□ -2.6
ABCA4P78363 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.18□□□□□ -2.6
ABCA4P78363 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.18□□□□□ -2.6
ABCA4P78363 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.18□□□□□ -2.6
ABCA4P78363 SNORD115.2-201ENST00000391126 59 ntBASIC-1.18□□□□□ -2.6
ABCA4P78363 RNU6-635P-201ENST00000516651 102 ntBASIC-1.18□□□□□ -2.6
ABCA4P78363 RNU6-844P-201ENST00000517175 102 ntBASIC-1.18□□□□□ -2.6
ABCA4P78363 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.18□□□□□ -2.6
ABCA4P78363 AC020661.2-201ENST00000560114 134 ntBASIC-1.18□□□□□ -2.6
ABCA4P78363 AP001318.4-201ENST00000616637 121 ntBASIC-1.18□□□□□ -2.6
ABCA4P78363 RNU6-633P-201ENST00000362612 103 ntBASIC-1.18□□□□□ -2.6
ABCA4P78363 RNU6-876P-201ENST00000391295 104 ntBASIC-1.18□□□□□ -2.6
ABCA4P78363 RNU6-985P-201ENST00000410182 104 ntBASIC-1.18□□□□□ -2.6
ABCA4P78363 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 RNU2-16P-201ENST00000410712 136 ntBASIC-1.19□□□□□ -2.6
ABCA4P78363 AL589823.1-201ENST00000429577 183 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms