Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MIR224-201ENST00000384889 81 ntBASIC-0.21□□□□□ -2.44
HERVK_113P62684 SNORD38.3-201ENST00000516599 73 ntBASIC-0.21□□□□□ -2.44
HERVK_113P62684 AL590491.3-201ENST00000610731 82 ntBASIC-0.21□□□□□ -2.44
HERVK_113P62684 MIR124-2-201ENST00000385081 109 ntBASIC-0.22□□□□□ -2.44
HERVK_113P62684 SNORD57-201ENST00000448188 72 ntBASIC-0.22□□□□□ -2.44
HERVK_113P62684 AC093726.3-201ENST00000637588 150 ntBASIC-0.22□□□□□ -2.44
HERVK_113P62684 MIR4788-201ENST00000639104 80 ntBASIC-0.22□□□□□ -2.44
HERVK_113P62684 SNORD60.1-201ENST00000362451 73 ntBASIC-0.23□□□□□ -2.45
HERVK_113P62684 RNU6-458P-201ENST00000384179 107 ntBASIC-0.23□□□□□ -2.45
HERVK_113P62684 RNU6-788P-201ENST00000390967 104 ntBASIC-0.23□□□□□ -2.45
HERVK_113P62684 AC114755.3-201ENST00000481111 251 ntBASIC-0.23□□□□□ -2.45
HERVK_113P62684 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.23□□□□□ -2.45
HERVK_113P62684 U6.58-201ENST00000613107 107 ntBASIC-0.23□□□□□ -2.45
HERVK_113P62684 MIR548AX-201ENST00000580117 73 ntBASIC-0.24□□□□□ -2.45
HERVK_113P62684 MIR4723-201ENST00000585070 81 ntBASIC-0.24□□□□□ -2.45
HERVK_113P62684 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.25□□□□□ -2.45
HERVK_113P62684 AC110620.1-201ENST00000416042 228 ntBASIC-0.25□□□□□ -2.45
HERVK_113P62684 MIR6851-201ENST00000617060 67 ntBASIC-0.25□□□□□ -2.45
HERVK_113P62684 SNORD116-16-201ENST00000384533 92 ntBASIC-0.26□□□□□ -2.45
HERVK_113P62684 RNU6-940P-201ENST00000363433 104 ntBASIC-0.27□□□□□ -2.45
HERVK_113P62684 MIR204-201ENST00000385200 110 ntBASIC-0.27□□□□□ -2.45
HERVK_113P62684 RNU6-924P-201ENST00000362926 108 ntBASIC-0.28□□□□□ -2.45
HERVK_113P62684 RNU6-246P-201ENST00000384702 107 ntBASIC-0.28□□□□□ -2.45
HERVK_113P62684 RNA5SP300-201ENST00000391197 107 ntBASIC-0.28□□□□□ -2.45
HERVK_113P62684 MIR1468-201ENST00000410600 86 ntBASIC-0.28□□□□□ -2.45
HERVK_113P62684 SNX3P1X-201ENST00000414887 175 ntBASIC-0.28□□□□□ -2.45
HERVK_113P62684 RNU7-88P-201ENST00000458752 63 ntBASIC-0.28□□□□□ -2.45
HERVK_113P62684 RNY1P9-201ENST00000532431 109 ntBASIC-0.28□□□□□ -2.45
HERVK_113P62684 RNA5SP275-201ENST00000363936 118 ntBASIC-0.29□□□□□ -2.46
HERVK_113P62684 RNU6-320P-201ENST00000516511 106 ntBASIC-0.29□□□□□ -2.46
HERVK_113P62684 RNU6-122P-201ENST00000516818 107 ntBASIC-0.29□□□□□ -2.46
HERVK_113P62684 MIR466-201ENST00000580653 84 ntBASIC-0.29□□□□□ -2.46
HERVK_113P62684 SNORD114-11-201ENST00000363738 75 ntBASIC-0.3□□□□□ -2.46
HERVK_113P62684 SNORD18.2-201ENST00000459604 70 ntBASIC-0.31□□□□□ -2.46
HERVK_113P62684 U7.5-201ENST00000517224 61 ntBASIC-0.31□□□□□ -2.46
HERVK_113P62684 MIR518B-201ENST00000385127 83 ntBASIC-0.32□□□□□ -2.46
HERVK_113P62684 MIR3681-201ENST00000580089 72 ntBASIC-0.32□□□□□ -2.46
HERVK_113P62684 SNORD75.1-201ENST00000408373 60 ntBASIC-0.34□□□□□ -2.46
HERVK_113P62684 SNORD22.1-201ENST00000516331 125 ntBASIC-0.34□□□□□ -2.46
HERVK_113P62684 RNA5SP169-201ENST00000517268 117 ntBASIC-0.34□□□□□ -2.46
HERVK_113P62684 RNU6-669P-201ENST00000365575 107 ntBASIC-0.35□□□□□ -2.47
HERVK_113P62684 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.35□□□□□ -2.47
HERVK_113P62684 RNU4-63P-201ENST00000411313 118 ntBASIC-0.35□□□□□ -2.47
HERVK_113P62684 MIR548AZ-201ENST00000616567 95 ntBASIC-0.35□□□□□ -2.47
HERVK_113P62684 SNORD74.6-201ENST00000364796 70 ntBASIC-0.36□□□□□ -2.47
HERVK_113P62684 SNORD1B-201ENST00000363091 84 ntBASIC-0.37□□□□□ -2.47
HERVK_113P62684 RNU6-598P-201ENST00000364017 105 ntBASIC-0.37□□□□□ -2.47
HERVK_113P62684 MIR3179-1-201ENST00000578940 84 ntBASIC-0.38□□□□□ -2.47
HERVK_113P62684 MIR3179-2-201ENST00000579107 84 ntBASIC-0.38□□□□□ -2.47
HERVK_113P62684 MIR3179-3-201ENST00000579566 84 ntBASIC-0.38□□□□□ -2.47
HERVK_113P62684 MIR3179-4-201ENST00000617599 84 ntBASIC-0.38□□□□□ -2.47
HERVK_113P62684 SNORA32.3-201ENST00000384772 121 ntBASIC-0.39□□□□□ -2.47
HERVK_113P62684 MIR196A2-201ENST00000385189 110 ntBASIC-0.39□□□□□ -2.47
HERVK_113P62684 RNU6-696P-201ENST00000390834 107 ntBASIC-0.39□□□□□ -2.47
HERVK_113P62684 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.39□□□□□ -2.47
HERVK_113P62684 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.39□□□□□ -2.47
HERVK_113P62684 MIR3938-201ENST00000582157 103 ntBASIC-0.39□□□□□ -2.47
HERVK_113P62684 U2.18-201ENST00000622185 84 ntBASIC-0.39□□□□□ -2.47
HERVK_113P62684 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
HERVK_113P62684 MT-TQ-201ENST00000387372 72 ntBASIC-0.4□□□□□ -2.47
HERVK_113P62684 RNU6-172P-201ENST00000411000 93 ntBASIC-0.4□□□□□ -2.47
HERVK_113P62684 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.4□□□□□ -2.47
HERVK_113P62684 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.4□□□□□ -2.47
HERVK_113P62684 AP000533.3-201ENST00000447704 118 ntBASIC-0.41□□□□□ -2.48
HERVK_113P62684 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.42□□□□□ -2.48
HERVK_113P62684 SNORA13-201ENST00000458790 133 ntBASIC-0.42□□□□□ -2.48
HERVK_113P62684 RNU6-231P-201ENST00000517122 103 ntBASIC-0.42□□□□□ -2.48
HERVK_113P62684 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.43□□□□□ -2.48
HERVK_113P62684 SNORD116.2-201ENST00000391251 93 ntBASIC-0.43□□□□□ -2.48
HERVK_113P62684 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
HERVK_113P62684 RNU6-732P-201ENST00000516033 103 ntBASIC-0.43□□□□□ -2.48
HERVK_113P62684 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.44□□□□□ -2.48
HERVK_113P62684 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.45□□□□□ -2.48
HERVK_113P62684 SNORD63.1-201ENST00000516178 80 ntBASIC-0.45□□□□□ -2.48
HERVK_113P62684 MIR7110-201ENST00000612638 86 ntBASIC-0.45□□□□□ -2.48
HERVK_113P62684 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.46□□□□□ -2.48
HERVK_113P62684 MIR633-201ENST00000384821 98 ntBASIC-0.46□□□□□ -2.48
HERVK_113P62684 RNU7-119P-201ENST00000459279 63 ntBASIC-0.46□□□□□ -2.48
HERVK_113P62684 AC021146.6-201ENST00000514659 117 ntBASIC-0.46□□□□□ -2.48
HERVK_113P62684 MIR548Q-201ENST00000408404 100 ntBASIC-0.47□□□□□ -2.48
HERVK_113P62684 RNU6-721P-201ENST00000410155 105 ntBASIC-0.47□□□□□ -2.48
HERVK_113P62684 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.47□□□□□ -2.48
HERVK_113P62684 MIR579-201ENST00000385221 98 ntBASIC-0.48□□□□□ -2.49
HERVK_113P62684 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.48□□□□□ -2.49
HERVK_113P62684 SNORD114-17-201ENST00000364699 75 ntBASIC-0.49□□□□□ -2.49
HERVK_113P62684 MIR548AA1-201ENST00000384971 97 ntBASIC-0.49□□□□□ -2.49
HERVK_113P62684 MIR601-201ENST00000385256 79 ntBASIC-0.49□□□□□ -2.49
HERVK_113P62684 RNU6-284P-201ENST00000411105 106 ntBASIC-0.49□□□□□ -2.49
HERVK_113P62684 RNU6-995P-201ENST00000391244 107 ntBASIC-0.5□□□□□ -2.49
HERVK_113P62684 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.51□□□□□ -2.49
HERVK_113P62684 RNU7-151P-201ENST00000516930 53 ntBASIC-0.51□□□□□ -2.49
HERVK_113P62684 MIR4436A-201ENST00000585278 85 ntBASIC-0.51□□□□□ -2.49
HERVK_113P62684 SNORA3B-201ENST00000391305 131 ntBASIC-0.52□□□□□ -2.49
HERVK_113P62684 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.52□□□□□ -2.49
HERVK_113P62684 MIR198-201ENST00000637333 62 ntBASIC-0.52□□□□□ -2.49
HERVK_113P62684 RNU6-810P-201ENST00000364001 107 ntBASIC-0.53□□□□□ -2.49
HERVK_113P62684 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.53□□□□□ -2.49
HERVK_113P62684 RNU6-520P-201ENST00000384717 104 ntBASIC-0.53□□□□□ -2.49
HERVK_113P62684 SNORA26.4-201ENST00000391188 123 ntBASIC-0.53□□□□□ -2.49
HERVK_113P62684 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms