Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MIR664B-201ENST00000626756 61 ntBASIC-2.21□□□□□ -2.76
ACLYP53396 RNU6-834P-201ENST00000362367 110 ntBASIC-2.22□□□□□ -2.76
ACLYP53396 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.23□□□□□ -2.77
ACLYP53396 RNU6-129P-201ENST00000391022 107 ntBASIC-2.23□□□□□ -2.77
ACLYP53396 MTND4LP1-201ENST00000446263 157 ntBASIC-2.23□□□□□ -2.77
ACLYP53396 AL031737.1-201ENST00000450125 223 ntBASIC-2.23□□□□□ -2.77
ACLYP53396 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.23□□□□□ -2.77
ACLYP53396 MALAT1.1-201ENST00000618249 95 ntBASIC-2.23□□□□□ -2.77
ACLYP53396 RNU6-209P-201ENST00000384118 107 ntBASIC-2.25□□□□□ -2.77
ACLYP53396 MIR630-201ENST00000384957 97 ntBASIC-2.25□□□□□ -2.77
ACLYP53396 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.25□□□□□ -2.77
ACLYP53396 MIR1297-201ENST00000637311 77 ntBASIC-2.25□□□□□ -2.77
ACLYP53396 MIR450A1-201ENST00000362262 91 ntBASIC-2.26□□□□□ -2.77
ACLYP53396 RNA5SP215-201ENST00000363440 122 ntBASIC-2.26□□□□□ -2.77
ACLYP53396 RNU6-81P-201ENST00000365608 104 ntBASIC-2.26□□□□□ -2.77
ACLYP53396 MIR548AA1-201ENST00000384971 97 ntBASIC-2.26□□□□□ -2.77
ACLYP53396 MIR4756-201ENST00000577874 78 ntBASIC-2.26□□□□□ -2.77
ACLYP53396 MIR3170-201ENST00000582699 77 ntBASIC-2.26□□□□□ -2.77
ACLYP53396 AP001318.4-201ENST00000616637 121 ntBASIC-2.26□□□□□ -2.77
ACLYP53396 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.27□□□□□ -2.77
ACLYP53396 SNORA40.13-201ENST00000516379 120 ntBASIC-2.27□□□□□ -2.77
ACLYP53396 AC120024.2-201ENST00000576526 175 ntBASIC-2.27□□□□□ -2.77
ACLYP53396 MIR4484-201ENST00000582855 83 ntBASIC-2.27□□□□□ -2.77
ACLYP53396 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.28□□□□□ -2.77
ACLYP53396 SNORD113-2-201ENST00000391082 72 ntBASIC-2.28□□□□□ -2.77
ACLYP53396 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.28□□□□□ -2.77
ACLYP53396 RNU6-247P-201ENST00000362636 107 ntBASIC-2.29□□□□□ -2.78
ACLYP53396 RNU6-668P-201ENST00000364180 107 ntBASIC-2.29□□□□□ -2.78
ACLYP53396 SNORD116-16-201ENST00000384533 92 ntBASIC-2.29□□□□□ -2.78
ACLYP53396 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.29□□□□□ -2.78
ACLYP53396 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.29□□□□□ -2.78
ACLYP53396 MIR8053-201ENST00000613344 75 ntBASIC-2.29□□□□□ -2.78
ACLYP53396 RNA5SP173-201ENST00000364857 136 ntBASIC-2.3□□□□□ -2.78
ACLYP53396 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.31□□□□□ -2.78
ACLYP53396 SNORD113.1-201ENST00000363280 73 ntBASIC-2.32□□□□□ -2.78
ACLYP53396 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.32□□□□□ -2.78
ACLYP53396 RNU6-380P-201ENST00000410207 107 ntBASIC-2.32□□□□□ -2.78
ACLYP53396 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.32□□□□□ -2.78
ACLYP53396 RNU6-563P-201ENST00000364872 108 ntBASIC-2.33□□□□□ -2.78
ACLYP53396 RNU6-841P-201ENST00000383872 107 ntBASIC-2.33□□□□□ -2.78
ACLYP53396 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.33□□□□□ -2.78
ACLYP53396 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.33□□□□□ -2.78
ACLYP53396 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.33□□□□□ -2.78
ACLYP53396 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.34□□□□□ -2.78
ACLYP53396 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.34□□□□□ -2.78
ACLYP53396 snosnR66.1-201ENST00000391095 99 ntBASIC-2.34□□□□□ -2.78
ACLYP53396 RNU6-118P-201ENST00000516552 102 ntBASIC-2.34□□□□□ -2.78
ACLYP53396 MIR3123-201ENST00000583417 75 ntBASIC-2.34□□□□□ -2.78
ACLYP53396 AC006160.2-201ENST00000637708 154 ntBASIC-2.34□□□□□ -2.78
ACLYP53396 RNU6-995P-201ENST00000391244 107 ntBASIC-2.35□□□□□ -2.79
ACLYP53396 RNU6-675P-201ENST00000384236 104 ntBASIC-2.36□□□□□ -2.79
ACLYP53396 RNU6-22P-201ENST00000384355 107 ntBASIC-2.36□□□□□ -2.79
ACLYP53396 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.36□□□□□ -2.79
ACLYP53396 SNORD1B-201ENST00000363091 84 ntBASIC-2.37□□□□□ -2.79
ACLYP53396 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.37□□□□□ -2.79
ACLYP53396 RNU6-119P-201ENST00000364882 107 ntBASIC-2.37□□□□□ -2.79
ACLYP53396 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.37□□□□□ -2.79
ACLYP53396 SNORA41B-201ENST00000384785 128 ntBASIC-2.37□□□□□ -2.79
ACLYP53396 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.38□□□□□ -2.79
ACLYP53396 SNORD45A-201ENST00000384512 84 ntBASIC-2.38□□□□□ -2.79
ACLYP53396 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.38□□□□□ -2.79
ACLYP53396 RNU6-980P-201ENST00000516925 103 ntBASIC-2.38□□□□□ -2.79
ACLYP53396 MIR488-201ENST00000365739 83 ntBASIC-2.39□□□□□ -2.79
ACLYP53396 RNU6-258P-201ENST00000390884 101 ntBASIC-2.39□□□□□ -2.79
ACLYP53396 RNY4P18-201ENST00000391107 89 ntBASIC-2.39□□□□□ -2.79
ACLYP53396 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.39□□□□□ -2.79
ACLYP53396 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.39□□□□□ -2.79
ACLYP53396 SNORA63.4-201ENST00000362763 126 ntBASIC-2.4□□□□□ -2.79
ACLYP53396 RNA5SP405-201ENST00000363059 114 ntBASIC-2.4□□□□□ -2.79
ACLYP53396 RNU6-755P-201ENST00000364400 103 ntBASIC-2.4□□□□□ -2.79
ACLYP53396 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.4□□□□□ -2.79
ACLYP53396 MIR548AM-201ENST00000584298 74 ntBASIC-2.41□□□□□ -2.8
ACLYP53396 MIR664A-201ENST00000626086 82 ntBASIC-2.41□□□□□ -2.8
ACLYP53396 SNORA27.2-201ENST00000363365 126 ntBASIC-2.42□□□□□ -2.8
ACLYP53396 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.42□□□□□ -2.8
ACLYP53396 RNU6-844P-201ENST00000517175 102 ntBASIC-2.42□□□□□ -2.8
ACLYP53396 RNU6-315P-201ENST00000362666 107 ntBASIC-2.43□□□□□ -2.8
ACLYP53396 MIR496-201ENST00000385226 102 ntBASIC-2.43□□□□□ -2.8
ACLYP53396 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.43□□□□□ -2.8
ACLYP53396 MIR3139-201ENST00000579145 76 ntBASIC-2.43□□□□□ -2.8
ACLYP53396 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.44□□□□□ -2.8
ACLYP53396 SNORD63.2-201ENST00000516303 64 ntBASIC-2.44□□□□□ -2.8
ACLYP53396 RNU7-151P-201ENST00000516930 53 ntBASIC-2.44□□□□□ -2.8
ACLYP53396 RNU6-640P-201ENST00000363693 105 ntBASIC-2.45□□□□□ -2.8
ACLYP53396 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.45□□□□□ -2.8
ACLYP53396 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.45□□□□□ -2.8
ACLYP53396 RNU6-313P-201ENST00000516317 112 ntBASIC-2.46□□□□□ -2.8
ACLYP53396 RNU6-194P-201ENST00000363862 105 ntBASIC-2.47□□□□□ -2.8
ACLYP53396 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.47□□□□□ -2.8
ACLYP53396 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.48□□□□□ -2.81
ACLYP53396 RNU6-669P-201ENST00000365575 107 ntBASIC-2.48□□□□□ -2.81
ACLYP53396 RNU6-172P-201ENST00000411000 93 ntBASIC-2.48□□□□□ -2.81
ACLYP53396 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.49□□□□□ -2.81
ACLYP53396 RNU6-32P-201ENST00000383948 107 ntBASIC-2.49□□□□□ -2.81
ACLYP53396 RNU6-13P-201ENST00000384248 107 ntBASIC-2.49□□□□□ -2.81
ACLYP53396 RNU6-12P-201ENST00000384604 107 ntBASIC-2.49□□□□□ -2.81
ACLYP53396 RNU6-41P-201ENST00000384741 107 ntBASIC-2.49□□□□□ -2.81
ACLYP53396 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.49□□□□□ -2.81
ACLYP53396 AC013734.1-201ENST00000619329 111 ntBASIC-2.49□□□□□ -2.81
ACLYP53396 MIR579-201ENST00000385221 98 ntBASIC-2.5□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms