Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL606753.1-201ENST00000427435 87 ntBASIC-1.46□□□□□ -2.64
CXCL12P48061 SNORD113.1-201ENST00000363280 73 ntBASIC-1.47□□□□□ -2.64
CXCL12P48061 RNU6-668P-201ENST00000364180 107 ntBASIC-1.47□□□□□ -2.64
CXCL12P48061 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.47□□□□□ -2.64
CXCL12P48061 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.47□□□□□ -2.64
CXCL12P48061 MIR8053-201ENST00000613344 75 ntBASIC-1.47□□□□□ -2.64
CXCL12P48061 MIR664A-201ENST00000626086 82 ntBASIC-1.47□□□□□ -2.64
CXCL12P48061 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.48□□□□□ -2.65
CXCL12P48061 SNORD45A-201ENST00000384512 84 ntBASIC-1.48□□□□□ -2.65
CXCL12P48061 SNORD20-201ENST00000384550 80 ntBASIC-1.48□□□□□ -2.65
CXCL12P48061 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.48□□□□□ -2.65
CXCL12P48061 RNU6-168P-201ENST00000516189 101 ntBASIC-1.48□□□□□ -2.65
CXCL12P48061 AC138207.3-201ENST00000585289 166 ntBASIC-1.48□□□□□ -2.65
CXCL12P48061 U2.18-201ENST00000622185 84 ntBASIC-1.48□□□□□ -2.65
CXCL12P48061 RNA5SP215-201ENST00000363440 122 ntBASIC-1.49□□□□□ -2.65
CXCL12P48061 RNU6-215P-201ENST00000365169 102 ntBASIC-1.49□□□□□ -2.65
CXCL12P48061 RNU6-315P-201ENST00000362666 107 ntBASIC-1.5□□□□□ -2.65
CXCL12P48061 SNORD113-2-201ENST00000391082 72 ntBASIC-1.5□□□□□ -2.65
CXCL12P48061 RNA5SP461-201ENST00000516451 104 ntBASIC-1.5□□□□□ -2.65
CXCL12P48061 RNU6-919P-201ENST00000516731 104 ntBASIC-1.5□□□□□ -2.65
CXCL12P48061 MIR3115-201ENST00000577915 68 ntBASIC-1.5□□□□□ -2.65
CXCL12P48061 IGLL4P-201ENST00000614590 133 ntBASIC-1.5□□□□□ -2.65
CXCL12P48061 RNY1P1-201ENST00000364372 112 ntBASIC-1.51□□□□□ -2.65
CXCL12P48061 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.51□□□□□ -2.65
CXCL12P48061 RNU6-608P-201ENST00000383927 104 ntBASIC-1.51□□□□□ -2.65
CXCL12P48061 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.51□□□□□ -2.65
CXCL12P48061 MIR520D-201ENST00000385002 87 ntBASIC-1.51□□□□□ -2.65
CXCL12P48061 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.52□□□□□ -2.65
CXCL12P48061 RNU6-49P-201ENST00000384256 107 ntBASIC-1.52□□□□□ -2.65
CXCL12P48061 AC018880.2-201ENST00000414265 201 ntBASIC-1.52□□□□□ -2.65
CXCL12P48061 MIR5588-201ENST00000581890 63 ntBASIC-1.52□□□□□ -2.65
CXCL12P48061 MIR6502-201ENST00000617296 76 ntBASIC-1.52□□□□□ -2.65
CXCL12P48061 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.53□□□□□ -2.65
CXCL12P48061 MIR1285-2-201ENST00000408311 88 ntBASIC-1.53□□□□□ -2.65
CXCL12P48061 MIR4520-1-201ENST00000582609 70 ntBASIC-1.53□□□□□ -2.65
CXCL12P48061 MIR4441-201ENST00000582623 100 ntBASIC-1.53□□□□□ -2.65
CXCL12P48061 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.54□□□□□ -2.66
CXCL12P48061 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.54□□□□□ -2.66
CXCL12P48061 SNORD116-16-201ENST00000384533 92 ntBASIC-1.54□□□□□ -2.66
CXCL12P48061 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.55□□□□□ -2.66
CXCL12P48061 SNORA41B-201ENST00000384785 128 ntBASIC-1.55□□□□□ -2.66
CXCL12P48061 RNU6-979P-201ENST00000383896 107 ntBASIC-1.56□□□□□ -2.66
CXCL12P48061 HLA-S-202ENST00000425174 53 ntBASIC-1.56□□□□□ -2.66
CXCL12P48061 RNA5SP180-201ENST00000516181 101 ntBASIC-1.56□□□□□ -2.66
CXCL12P48061 RNA5SP173-201ENST00000364857 136 ntBASIC-1.57□□□□□ -2.66
CXCL12P48061 RNU6-44P-201ENST00000384045 107 ntBASIC-1.57□□□□□ -2.66
CXCL12P48061 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.57□□□□□ -2.66
CXCL12P48061 MIR5591-201ENST00000578248 65 ntBASIC-1.57□□□□□ -2.66
CXCL12P48061 MIR3170-201ENST00000582699 77 ntBASIC-1.57□□□□□ -2.66
CXCL12P48061 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.58□□□□□ -2.66
CXCL12P48061 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.58□□□□□ -2.66
CXCL12P48061 MIR548AA1-201ENST00000384971 97 ntBASIC-1.58□□□□□ -2.66
CXCL12P48061 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.58□□□□□ -2.66
CXCL12P48061 RNA5SP89-201ENST00000410300 108 ntBASIC-1.58□□□□□ -2.66
CXCL12P48061 RNU6-79P-201ENST00000362511 107 ntBASIC-1.59□□□□□ -2.66
CXCL12P48061 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.59□□□□□ -2.66
CXCL12P48061 SNORD1B-201ENST00000363091 84 ntBASIC-1.6□□□□□ -2.67
CXCL12P48061 RNU7-171P-201ENST00000459581 62 ntBASIC-1.6□□□□□ -2.67
CXCL12P48061 RNU6-70P-201ENST00000516438 60 ntBASIC-1.6□□□□□ -2.67
CXCL12P48061 MIR4770-201ENST00000579149 58 ntBASIC-1.6□□□□□ -2.67
CXCL12P48061 MIR4712-201ENST00000583750 82 ntBASIC-1.6□□□□□ -2.67
CXCL12P48061 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.6□□□□□ -2.67
CXCL12P48061 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.61□□□□□ -2.67
CXCL12P48061 RNU6-400P-201ENST00000391173 106 ntBASIC-1.61□□□□□ -2.67
CXCL12P48061 AL603908.1-201ENST00000406098 201 ntBASIC-1.61□□□□□ -2.67
CXCL12P48061 MIR1245B-201ENST00000636115 69 ntBASIC-1.61□□□□□ -2.67
CXCL12P48061 SNORD116-24-201ENST00000384549 92 ntBASIC-1.62□□□□□ -2.67
CXCL12P48061 MIR154-201ENST00000385243 84 ntBASIC-1.62□□□□□ -2.67
CXCL12P48061 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.63□□□□□ -2.67
CXCL12P48061 RNU6-895P-201ENST00000384125 103 ntBASIC-1.63□□□□□ -2.67
CXCL12P48061 MIR23C-201ENST00000579846 100 ntBASIC-1.63□□□□□ -2.67
CXCL12P48061 RNU6-247P-201ENST00000362636 107 ntBASIC-1.64□□□□□ -2.67
CXCL12P48061 RNY4P30-201ENST00000410216 95 ntBASIC-1.64□□□□□ -2.67
CXCL12P48061 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.64□□□□□ -2.67
CXCL12P48061 RNU6-258P-201ENST00000390884 101 ntBASIC-1.65□□□□□ -2.67
CXCL12P48061 RNU6-789P-201ENST00000517105 102 ntBASIC-1.65□□□□□ -2.67
CXCL12P48061 MIR494-201ENST00000349529 81 ntBASIC-1.66□□□□□ -2.68
CXCL12P48061 SNORD115-31-201ENST00000365318 82 ntBASIC-1.66□□□□□ -2.68
CXCL12P48061 RNU6-995P-201ENST00000391244 107 ntBASIC-1.66□□□□□ -2.68
CXCL12P48061 RNU7-151P-201ENST00000516930 53 ntBASIC-1.66□□□□□ -2.68
CXCL12P48061 AC120024.2-201ENST00000576526 175 ntBASIC-1.66□□□□□ -2.68
CXCL12P48061 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.66□□□□□ -2.68
CXCL12P48061 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.67□□□□□ -2.68
CXCL12P48061 MIR579-201ENST00000385221 98 ntBASIC-1.67□□□□□ -2.68
CXCL12P48061 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.67□□□□□ -2.68
CXCL12P48061 MIR3134-201ENST00000579433 74 ntBASIC-1.68□□□□□ -2.68
CXCL12P48061 RNU6-563P-201ENST00000364872 108 ntBASIC-1.69□□□□□ -2.68
CXCL12P48061 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.69□□□□□ -2.68
CXCL12P48061 RNU6-242P-201ENST00000384359 107 ntBASIC-1.69□□□□□ -2.68
CXCL12P48061 RNU6-172P-201ENST00000411000 93 ntBASIC-1.69□□□□□ -2.68
CXCL12P48061 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.7□□□□□ -2.68
CXCL12P48061 RNU6-406P-201ENST00000516470 107 ntBASIC-1.7□□□□□ -2.68
CXCL12P48061 MIR548AI-201ENST00000579940 88 ntBASIC-1.7□□□□□ -2.68
CXCL12P48061 RNA5SP86-201ENST00000390869 98 ntBASIC-1.71□□□□□ -2.68
CXCL12P48061 MIR548H1-201ENST00000408610 102 ntBASIC-1.71□□□□□ -2.68
CXCL12P48061 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.71□□□□□ -2.68
CXCL12P48061 RNU6-687P-201ENST00000516443 89 ntBASIC-1.71□□□□□ -2.68
CXCL12P48061 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.71□□□□□ -2.68
CXCL12P48061 RNY4P27-201ENST00000363341 96 ntBASIC-1.72□□□□□ -2.68
CXCL12P48061 MIR450A2-201ENST00000385022 100 ntBASIC-1.72□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 257.5 ms