Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC006160.2-201ENST00000637708 154 ntBASIC-1.55□□□□□ -2.66
HOXD13P35453 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.56□□□□□ -2.66
HOXD13P35453 MIR488-201ENST00000365739 83 ntBASIC-1.56□□□□□ -2.66
HOXD13P35453 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
HOXD13P35453 RNU6-696P-201ENST00000390834 107 ntBASIC-1.56□□□□□ -2.66
HOXD13P35453 MIR4756-201ENST00000577874 78 ntBASIC-1.56□□□□□ -2.66
HOXD13P35453 MIR198-201ENST00000637333 62 ntBASIC-1.56□□□□□ -2.66
HOXD13P35453 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.57□□□□□ -2.66
HOXD13P35453 RNU6-844P-201ENST00000517175 102 ntBASIC-1.57□□□□□ -2.66
HOXD13P35453 SNORA63.4-201ENST00000362763 126 ntBASIC-1.58□□□□□ -2.66
HOXD13P35453 RNU6-698P-201ENST00000363523 107 ntBASIC-1.58□□□□□ -2.66
HOXD13P35453 RNU6-34P-201ENST00000364874 107 ntBASIC-1.58□□□□□ -2.66
HOXD13P35453 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.58□□□□□ -2.66
HOXD13P35453 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.58□□□□□ -2.66
HOXD13P35453 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.58□□□□□ -2.66
HOXD13P35453 AC018880.2-201ENST00000414265 201 ntBASIC-1.58□□□□□ -2.66
HOXD13P35453 RNU6-919P-201ENST00000516731 104 ntBASIC-1.58□□□□□ -2.66
HOXD13P35453 RNU6-668P-201ENST00000364180 107 ntBASIC-1.59□□□□□ -2.66
HOXD13P35453 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.59□□□□□ -2.66
HOXD13P35453 MIR4441-201ENST00000582623 100 ntBASIC-1.59□□□□□ -2.66
HOXD13P35453 MIR664B-201ENST00000626756 61 ntBASIC-1.59□□□□□ -2.66
HOXD13P35453 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.6□□□□□ -2.67
HOXD13P35453 RNU6-640P-201ENST00000363693 105 ntBASIC-1.6□□□□□ -2.67
HOXD13P35453 RNU6-587P-201ENST00000391282 106 ntBASIC-1.6□□□□□ -2.67
HOXD13P35453 MIR8053-201ENST00000613344 75 ntBASIC-1.6□□□□□ -2.67
HOXD13P35453 MIR365A-201ENST00000362260 87 ntBASIC-1.61□□□□□ -2.67
HOXD13P35453 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.61□□□□□ -2.67
HOXD13P35453 RNU6-675P-201ENST00000384236 104 ntBASIC-1.61□□□□□ -2.67
HOXD13P35453 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.61□□□□□ -2.67
HOXD13P35453 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.61□□□□□ -2.67
HOXD13P35453 RNU6-147P-201ENST00000383983 107 ntBASIC-1.62□□□□□ -2.67
HOXD13P35453 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.62□□□□□ -2.67
HOXD13P35453 IGLL4P-201ENST00000614590 133 ntBASIC-1.62□□□□□ -2.67
HOXD13P35453 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.63□□□□□ -2.67
HOXD13P35453 MIR630-201ENST00000384957 97 ntBASIC-1.63□□□□□ -2.67
HOXD13P35453 U4.4-201ENST00000620626 117 ntBASIC-1.63□□□□□ -2.67
HOXD13P35453 RNU6-215P-201ENST00000365169 102 ntBASIC-1.64□□□□□ -2.67
HOXD13P35453 RNU6-608P-201ENST00000383927 104 ntBASIC-1.64□□□□□ -2.67
HOXD13P35453 MIR601-201ENST00000385256 79 ntBASIC-1.64□□□□□ -2.67
HOXD13P35453 SNORD113-2-201ENST00000391082 72 ntBASIC-1.64□□□□□ -2.67
HOXD13P35453 RNU6-695P-201ENST00000391157 104 ntBASIC-1.64□□□□□ -2.67
HOXD13P35453 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.64□□□□□ -2.67
HOXD13P35453 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.64□□□□□ -2.67
HOXD13P35453 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.64□□□□□ -2.67
HOXD13P35453 RNU6-630P-201ENST00000391258 106 ntBASIC-1.65□□□□□ -2.67
HOXD13P35453 SNORD113.1-201ENST00000363280 73 ntBASIC-1.66□□□□□ -2.68
HOXD13P35453 RNA5SP215-201ENST00000363440 122 ntBASIC-1.66□□□□□ -2.68
HOXD13P35453 RNY1P1-201ENST00000364372 112 ntBASIC-1.66□□□□□ -2.68
HOXD13P35453 RNA5SP173-201ENST00000364857 136 ntBASIC-1.66□□□□□ -2.68
HOXD13P35453 MIR548AI-201ENST00000579940 88 ntBASIC-1.66□□□□□ -2.68
HOXD13P35453 MIR3123-201ENST00000583417 75 ntBASIC-1.66□□□□□ -2.68
HOXD13P35453 RNU6-598P-201ENST00000364017 105 ntBASIC-1.67□□□□□ -2.68
HOXD13P35453 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.67□□□□□ -2.68
HOXD13P35453 SNORD45A-201ENST00000384512 84 ntBASIC-1.67□□□□□ -2.68
HOXD13P35453 SNORD20-201ENST00000384550 80 ntBASIC-1.67□□□□□ -2.68
HOXD13P35453 MIR1468-201ENST00000410600 86 ntBASIC-1.67□□□□□ -2.68
HOXD13P35453 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.67□□□□□ -2.68
HOXD13P35453 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.68□□□□□ -2.68
HOXD13P35453 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.68□□□□□ -2.68
HOXD13P35453 RNU6-841P-201ENST00000383872 107 ntBASIC-1.68□□□□□ -2.68
HOXD13P35453 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.68□□□□□ -2.68
HOXD13P35453 MIR520D-201ENST00000385002 87 ntBASIC-1.68□□□□□ -2.68
HOXD13P35453 RNU6-980P-201ENST00000516925 103 ntBASIC-1.68□□□□□ -2.68
HOXD13P35453 MIR548AM-201ENST00000584298 74 ntBASIC-1.68□□□□□ -2.68
HOXD13P35453 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.69□□□□□ -2.68
HOXD13P35453 RNU6-315P-201ENST00000362666 107 ntBASIC-1.69□□□□□ -2.68
HOXD13P35453 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.69□□□□□ -2.68
HOXD13P35453 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.69□□□□□ -2.68
HOXD13P35453 U2.18-201ENST00000622185 84 ntBASIC-1.69□□□□□ -2.68
HOXD13P35453 RNU6-563P-201ENST00000364872 108 ntBASIC-1.7□□□□□ -2.68
HOXD13P35453 MIR664A-201ENST00000626086 82 ntBASIC-1.7□□□□□ -2.68
HOXD13P35453 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
HOXD13P35453 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.71□□□□□ -2.68
HOXD13P35453 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.71□□□□□ -2.68
HOXD13P35453 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.71□□□□□ -2.68
HOXD13P35453 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.71□□□□□ -2.68
HOXD13P35453 RNU4-88P-201ENST00000411220 86 ntBASIC-1.72□□□□□ -2.68
HOXD13P35453 MIR5588-201ENST00000581890 63 ntBASIC-1.72□□□□□ -2.68
HOXD13P35453 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.73□□□□□ -2.69
HOXD13P35453 RNA5SP405-201ENST00000363059 114 ntBASIC-1.73□□□□□ -2.69
HOXD13P35453 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.73□□□□□ -2.69
HOXD13P35453 AC120024.2-201ENST00000576526 175 ntBASIC-1.74□□□□□ -2.69
HOXD13P35453 RNU6-247P-201ENST00000362636 107 ntBASIC-1.75□□□□□ -2.69
HOXD13P35453 RNU6-895P-201ENST00000384125 103 ntBASIC-1.75□□□□□ -2.69
HOXD13P35453 SNORD116-16-201ENST00000384533 92 ntBASIC-1.75□□□□□ -2.69
HOXD13P35453 MIR548AA1-201ENST00000384971 97 ntBASIC-1.75□□□□□ -2.69
HOXD13P35453 MIR154-201ENST00000385243 84 ntBASIC-1.75□□□□□ -2.69
HOXD13P35453 RNU6-118P-201ENST00000516552 102 ntBASIC-1.75□□□□□ -2.69
HOXD13P35453 RNU6-49P-201ENST00000384256 107 ntBASIC-1.76□□□□□ -2.69
HOXD13P35453 RNU6-406P-201ENST00000516470 107 ntBASIC-1.76□□□□□ -2.69
HOXD13P35453 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.77□□□□□ -2.69
HOXD13P35453 RNU6-70P-201ENST00000516438 60 ntBASIC-1.77□□□□□ -2.69
HOXD13P35453 MIR3139-201ENST00000579145 76 ntBASIC-1.77□□□□□ -2.69
HOXD13P35453 MIR23C-201ENST00000579846 100 ntBASIC-1.77□□□□□ -2.69
HOXD13P35453 RNU6-194P-201ENST00000363862 105 ntBASIC-1.78□□□□□ -2.69
HOXD13P35453 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.78□□□□□ -2.69
HOXD13P35453 RNU6-44P-201ENST00000384045 107 ntBASIC-1.78□□□□□ -2.69
HOXD13P35453 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.78□□□□□ -2.69
HOXD13P35453 RNU6-258P-201ENST00000390884 101 ntBASIC-1.78□□□□□ -2.69
HOXD13P35453 RNU6-995P-201ENST00000391244 107 ntBASIC-1.78□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms