Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.58□□□□□ -2.5
SMARCA1P28370 SNORD22.1-201ENST00000516331 125 ntBASIC-0.58□□□□□ -2.5
SMARCA1P28370 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.59□□□□□ -2.5
SMARCA1P28370 SNORD74.6-201ENST00000364796 70 ntBASIC-0.59□□□□□ -2.5
SMARCA1P28370 RNU6-663P-201ENST00000391105 106 ntBASIC-0.6□□□□□ -2.51
SMARCA1P28370 RNU6-284P-201ENST00000411105 106 ntBASIC-0.6□□□□□ -2.51
SMARCA1P28370 MIR4320-201ENST00000636981 65 ntBASIC-0.6□□□□□ -2.51
SMARCA1P28370 MIR587-201ENST00000384845 96 ntBASIC-0.61□□□□□ -2.51
SMARCA1P28370 MIR601-201ENST00000385256 79 ntBASIC-0.61□□□□□ -2.51
SMARCA1P28370 U4.2-201ENST00000618561 85 ntBASIC-0.61□□□□□ -2.51
SMARCA1P28370 SNORA13-201ENST00000458790 133 ntBASIC-0.62□□□□□ -2.51
SMARCA1P28370 RNU6-871P-201ENST00000516122 100 ntBASIC-0.62□□□□□ -2.51
SMARCA1P28370 MIR3179-1-201ENST00000578940 84 ntBASIC-0.62□□□□□ -2.51
SMARCA1P28370 MIR3179-2-201ENST00000579107 84 ntBASIC-0.62□□□□□ -2.51
SMARCA1P28370 MIR3179-3-201ENST00000579566 84 ntBASIC-0.62□□□□□ -2.51
SMARCA1P28370 MIR3179-4-201ENST00000617599 84 ntBASIC-0.62□□□□□ -2.51
SMARCA1P28370 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.64□□□□□ -2.51
SMARCA1P28370 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.64□□□□□ -2.51
SMARCA1P28370 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.64□□□□□ -2.51
SMARCA1P28370 RNU6-721P-201ENST00000410155 105 ntBASIC-0.64□□□□□ -2.51
SMARCA1P28370 RNU6-638P-201ENST00000516582 104 ntBASIC-0.64□□□□□ -2.51
SMARCA1P28370 RNU6-630P-201ENST00000391258 106 ntBASIC-0.65□□□□□ -2.51
SMARCA1P28370 SNORD30.1-201ENST00000391309 70 ntBASIC-0.65□□□□□ -2.51
SMARCA1P28370 SNORD18.2-201ENST00000459604 70 ntBASIC-0.65□□□□□ -2.51
SMARCA1P28370 RNU6-924P-201ENST00000362926 108 ntBASIC-0.66□□□□□ -2.52
SMARCA1P28370 RNU6-246P-201ENST00000384702 107 ntBASIC-0.66□□□□□ -2.52
SMARCA1P28370 SNORD113-2-201ENST00000391082 72 ntBASIC-0.66□□□□□ -2.52
SMARCA1P28370 MIR4436A-201ENST00000585278 85 ntBASIC-0.66□□□□□ -2.52
SMARCA1P28370 AP000533.3-201ENST00000447704 118 ntBASIC-0.67□□□□□ -2.52
SMARCA1P28370 MIR198-201ENST00000637333 62 ntBASIC-0.67□□□□□ -2.52
SMARCA1P28370 SNORD114-14-201ENST00000362723 75 ntBASIC-0.68□□□□□ -2.52
SMARCA1P28370 RNU6-649P-201ENST00000384463 107 ntBASIC-0.68□□□□□ -2.52
SMARCA1P28370 MIR527-201ENST00000385244 85 ntBASIC-0.68□□□□□ -2.52
SMARCA1P28370 SNORA3B-201ENST00000391305 131 ntBASIC-0.68□□□□□ -2.52
SMARCA1P28370 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.68□□□□□ -2.52
SMARCA1P28370 RNU6-542P-201ENST00000516405 103 ntBASIC-0.68□□□□□ -2.52
SMARCA1P28370 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.69□□□□□ -2.52
SMARCA1P28370 AC021146.6-201ENST00000514659 117 ntBASIC-0.69□□□□□ -2.52
SMARCA1P28370 RNU6-458P-201ENST00000384179 107 ntBASIC-0.7□□□□□ -2.52
SMARCA1P28370 U6.58-201ENST00000613107 107 ntBASIC-0.7□□□□□ -2.52
SMARCA1P28370 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.71□□□□□ -2.52
SMARCA1P28370 U6.111-201ENST00000636093 83 ntBASIC-0.71□□□□□ -2.52
SMARCA1P28370 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.72□□□□□ -2.52
SMARCA1P28370 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.72□□□□□ -2.52
SMARCA1P28370 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.72□□□□□ -2.52
SMARCA1P28370 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.72□□□□□ -2.52
SMARCA1P28370 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.72□□□□□ -2.52
SMARCA1P28370 SNORA25.4-201ENST00000363666 124 ntBASIC-0.73□□□□□ -2.53
SMARCA1P28370 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.73□□□□□ -2.53
SMARCA1P28370 RNU6-10P-201ENST00000384036 107 ntBASIC-0.73□□□□□ -2.53
SMARCA1P28370 RNU6-539P-201ENST00000516665 103 ntBASIC-0.73□□□□□ -2.53
SMARCA1P28370 U7.5-201ENST00000517224 61 ntBASIC-0.73□□□□□ -2.53
SMARCA1P28370 AC005520.4-201ENST00000604337 90 ntBASIC-0.73□□□□□ -2.53
SMARCA1P28370 SNORA41B-201ENST00000384785 128 ntBASIC-0.74□□□□□ -2.53
SMARCA1P28370 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.74□□□□□ -2.53
SMARCA1P28370 RNU7-88P-201ENST00000458752 63 ntBASIC-0.74□□□□□ -2.53
SMARCA1P28370 MIR6738-201ENST00000619620 64 ntBASIC-0.74□□□□□ -2.53
SMARCA1P28370 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.75□□□□□ -2.53
SMARCA1P28370 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.76□□□□□ -2.53
SMARCA1P28370 SNORD116-16-201ENST00000384533 92 ntBASIC-0.77□□□□□ -2.53
SMARCA1P28370 MIR4324-201ENST00000584846 72 ntBASIC-0.77□□□□□ -2.53
SMARCA1P28370 SNORD114-17-201ENST00000364699 75 ntBASIC-0.78□□□□□ -2.53
SMARCA1P28370 SCARNA17-201ENST00000516183 144 ntBASIC-0.78□□□□□ -2.53
SMARCA1P28370 MIR429-201ENST00000362106 83 ntBASIC-0.79□□□□□ -2.54
SMARCA1P28370 MIR1207-201ENST00000408249 87 ntBASIC-0.79□□□□□ -2.54
SMARCA1P28370 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.79□□□□□ -2.54
SMARCA1P28370 RNU6-92P-201ENST00000605893 104 ntBASIC-0.79□□□□□ -2.54
SMARCA1P28370 RNU6-800P-201ENST00000384473 103 ntBASIC-0.8□□□□□ -2.54
SMARCA1P28370 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.8□□□□□ -2.54
SMARCA1P28370 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.82□□□□□ -2.54
SMARCA1P28370 RNU6-598P-201ENST00000364017 105 ntBASIC-0.82□□□□□ -2.54
SMARCA1P28370 AC114801.3-201ENST00000510231 177 ntBASIC-0.83□□□□□ -2.54
SMARCA1P28370 RNU6-732P-201ENST00000516033 103 ntBASIC-0.83□□□□□ -2.54
SMARCA1P28370 MIR4511-201ENST00000582784 87 ntBASIC-0.83□□□□□ -2.54
SMARCA1P28370 RNU6-696P-201ENST00000390834 107 ntBASIC-0.84□□□□□ -2.54
SMARCA1P28370 SNORA26.4-201ENST00000391188 123 ntBASIC-0.84□□□□□ -2.54
SMARCA1P28370 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.85□□□□□ -2.55
SMARCA1P28370 RNA5SP461-201ENST00000516451 104 ntBASIC-0.85□□□□□ -2.55
SMARCA1P28370 MIR378F-201ENST00000578143 78 ntBASIC-0.85□□□□□ -2.55
SMARCA1P28370 SNORD60.1-201ENST00000362451 73 ntBASIC-0.86□□□□□ -2.55
SMARCA1P28370 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
SMARCA1P28370 SNORD63.1-201ENST00000516178 80 ntBASIC-0.86□□□□□ -2.55
SMARCA1P28370 SNORD115-33-201ENST00000363723 82 ntBASIC-0.87□□□□□ -2.55
SMARCA1P28370 SNORD114-3-201ENST00000364969 75 ntBASIC-0.87□□□□□ -2.55
SMARCA1P28370 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.87□□□□□ -2.55
SMARCA1P28370 SNORD19-201ENST00000391191 68 ntBASIC-0.87□□□□□ -2.55
SMARCA1P28370 AC103706.3-201ENST00000636297 85 ntBASIC-0.87□□□□□ -2.55
SMARCA1P28370 MIR196A1-201ENST00000388006 70 ntBASIC-0.88□□□□□ -2.55
SMARCA1P28370 U2.18-201ENST00000622185 84 ntBASIC-0.88□□□□□ -2.55
SMARCA1P28370 SNORA25.5-201ENST00000363782 126 ntBASIC-0.89□□□□□ -2.55
SMARCA1P28370 SNORD1B-201ENST00000363091 84 ntBASIC-0.9□□□□□ -2.55
SMARCA1P28370 RNA5SP192-201ENST00000364404 120 ntBASIC-0.91□□□□□ -2.56
SMARCA1P28370 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.92□□□□□ -2.56
SMARCA1P28370 RNU6-431P-201ENST00000383874 107 ntBASIC-0.92□□□□□ -2.56
SMARCA1P28370 MIR147A-201ENST00000385079 72 ntBASIC-0.92□□□□□ -2.56
SMARCA1P28370 AP002795.1-201ENST00000534879 84 ntBASIC-0.92□□□□□ -2.56
SMARCA1P28370 SNORD114-25-201ENST00000363742 72 ntBASIC-0.93□□□□□ -2.56
SMARCA1P28370 AL353691.2-201ENST00000443795 59 ntBASIC-0.94□□□□□ -2.56
SMARCA1P28370 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.94□□□□□ -2.56
SMARCA1P28370 RNU6-122P-201ENST00000516818 107 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms