Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU6-907P-201ENST00000390924 102 ntBASIC-1.88□□□□□ -2.71
USF1P22415 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.88□□□□□ -2.71
USF1P22415 SNORD45.1-201ENST00000363181 77 ntBASIC-1.89□□□□□ -2.71
USF1P22415 RNU6-258P-201ENST00000390884 101 ntBASIC-1.89□□□□□ -2.71
USF1P22415 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.89□□□□□ -2.71
USF1P22415 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.9□□□□□ -2.71
USF1P22415 RNU6-766P-201ENST00000362478 107 ntBASIC-1.91□□□□□ -2.72
USF1P22415 RNU6-686P-201ENST00000364839 107 ntBASIC-1.91□□□□□ -2.72
USF1P22415 SNORD115-31-201ENST00000365318 82 ntBASIC-1.91□□□□□ -2.72
USF1P22415 SNORD116-16-201ENST00000384533 92 ntBASIC-1.91□□□□□ -2.72
USF1P22415 MT-TM-201ENST00000387377 68 ntBASIC-1.91□□□□□ -2.72
USF1P22415 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.91□□□□□ -2.72
USF1P22415 RNU6-219P-201ENST00000364728 107 ntBASIC-1.92□□□□□ -2.72
USF1P22415 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.92□□□□□ -2.72
USF1P22415 MIR548AA1-201ENST00000384971 97 ntBASIC-1.92□□□□□ -2.72
USF1P22415 SNORD113-2-201ENST00000391082 72 ntBASIC-1.92□□□□□ -2.72
USF1P22415 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.93□□□□□ -2.72
USF1P22415 MIR630-201ENST00000384957 97 ntBASIC-1.93□□□□□ -2.72
USF1P22415 MIR548W-201ENST00000581970 74 ntBASIC-1.94□□□□□ -2.72
USF1P22415 MIR4719-201ENST00000585233 84 ntBASIC-1.94□□□□□ -2.72
USF1P22415 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.94□□□□□ -2.72
USF1P22415 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.94□□□□□ -2.72
USF1P22415 RNA5SP215-201ENST00000363440 122 ntBASIC-1.95□□□□□ -2.72
USF1P22415 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.95□□□□□ -2.72
USF1P22415 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.95□□□□□ -2.72
USF1P22415 MIR548BB-201ENST00000626714 66 ntBASIC-1.95□□□□□ -2.72
USF1P22415 SNORD1B-201ENST00000363091 84 ntBASIC-1.96□□□□□ -2.72
USF1P22415 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.96□□□□□ -2.72
USF1P22415 SNORA41B-201ENST00000384785 128 ntBASIC-1.96□□□□□ -2.72
USF1P22415 MTND4LP1-201ENST00000446263 157 ntBASIC-1.96□□□□□ -2.72
USF1P22415 snoU13.10-201ENST00000459301 103 ntBASIC-1.96□□□□□ -2.72
USF1P22415 RNU6-267P-201ENST00000516714 103 ntBASIC-1.96□□□□□ -2.72
USF1P22415 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.96□□□□□ -2.72
USF1P22415 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.97□□□□□ -2.72
USF1P22415 RNY4P7-201ENST00000364600 96 ntBASIC-1.97□□□□□ -2.72
USF1P22415 SNORD116-22-201ENST00000384430 92 ntBASIC-1.97□□□□□ -2.72
USF1P22415 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.97□□□□□ -2.72
USF1P22415 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.97□□□□□ -2.72
USF1P22415 RNU6-402P-201ENST00000410678 103 ntBASIC-1.98□□□□□ -2.73
USF1P22415 RNU6-589P-201ENST00000516485 107 ntBASIC-1.98□□□□□ -2.73
USF1P22415 MIR2052-201ENST00000636055 55 ntBASIC-1.98□□□□□ -2.73
USF1P22415 RNU6-247P-201ENST00000362636 107 ntBASIC-1.99□□□□□ -2.73
USF1P22415 SNORD113.1-201ENST00000363280 73 ntBASIC-1.99□□□□□ -2.73
USF1P22415 RNU6-129P-201ENST00000391022 107 ntBASIC-1.99□□□□□ -2.73
USF1P22415 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.99□□□□□ -2.73
USF1P22415 MIR4484-201ENST00000582855 83 ntBASIC-1.99□□□□□ -2.73
USF1P22415 AC013734.1-201ENST00000619329 111 ntBASIC-1.99□□□□□ -2.73
USF1P22415 RNU6-668P-201ENST00000364180 107 ntBASIC-2□□□□□ -2.73
USF1P22415 RNU6-1306P-201ENST00000365219 99 ntBASIC-2□□□□□ -2.73
USF1P22415 RNU6-1081P-201ENST00000384537 107 ntBASIC-2□□□□□ -2.73
USF1P22415 MIR4748-201ENST00000578076 82 ntBASIC-2□□□□□ -2.73
USF1P22415 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2□□□□□ -2.73
USF1P22415 MIR1297-201ENST00000637311 77 ntBASIC-2□□□□□ -2.73
USF1P22415 AC099654.10-201ENST00000640395 161 ntBASIC-2□□□□□ -2.73
USF1P22415 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.01□□□□□ -2.73
USF1P22415 MIR466-201ENST00000580653 84 ntBASIC-2.01□□□□□ -2.73
USF1P22415 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.01□□□□□ -2.73
USF1P22415 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.01□□□□□ -2.73
USF1P22415 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.02□□□□□ -2.73
USF1P22415 AC005520.4-201ENST00000604337 90 ntBASIC-2.02□□□□□ -2.73
USF1P22415 MIR8053-201ENST00000613344 75 ntBASIC-2.02□□□□□ -2.73
USF1P22415 MALAT1.1-201ENST00000618249 95 ntBASIC-2.02□□□□□ -2.73
USF1P22415 RNA5SP173-201ENST00000364857 136 ntBASIC-2.03□□□□□ -2.73
USF1P22415 SNORD54-201ENST00000459159 67 ntBASIC-2.03□□□□□ -2.73
USF1P22415 RNU7-151P-201ENST00000516930 53 ntBASIC-2.03□□□□□ -2.73
USF1P22415 SNORA27.2-201ENST00000363365 126 ntBASIC-2.04□□□□□ -2.74
USF1P22415 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.04□□□□□ -2.74
USF1P22415 RNU6-959P-201ENST00000384671 107 ntBASIC-2.04□□□□□ -2.74
USF1P22415 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.04□□□□□ -2.74
USF1P22415 AC008267.6-201ENST00000441664 139 ntBASIC-2.04□□□□□ -2.74
USF1P22415 RNA5SP93-201ENST00000362525 114 ntBASIC-2.05□□□□□ -2.74
USF1P22415 RNU6-669P-201ENST00000365575 107 ntBASIC-2.05□□□□□ -2.74
USF1P22415 SNORD45A-201ENST00000384512 84 ntBASIC-2.05□□□□□ -2.74
USF1P22415 RNY4P18-201ENST00000391107 89 ntBASIC-2.05□□□□□ -2.74
USF1P22415 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.05□□□□□ -2.74
USF1P22415 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.05□□□□□ -2.74
USF1P22415 MIR7978-201ENST00000636158 59 ntBASIC-2.05□□□□□ -2.74
USF1P22415 U6.97-201ENST00000636904 101 ntBASIC-2.05□□□□□ -2.74
USF1P22415 RNU6-995P-201ENST00000391244 107 ntBASIC-2.06□□□□□ -2.74
USF1P22415 RNU6-675P-201ENST00000384236 104 ntBASIC-2.07□□□□□ -2.74
USF1P22415 MIR125B1-201ENST00000385236 88 ntBASIC-2.07□□□□□ -2.74
USF1P22415 SNORD63.2-201ENST00000516303 64 ntBASIC-2.07□□□□□ -2.74
USF1P22415 AL365222.1-201ENST00000614661 98 ntBASIC-2.07□□□□□ -2.74
USF1P22415 AP001318.4-201ENST00000616637 121 ntBASIC-2.07□□□□□ -2.74
USF1P22415 MIR664A-201ENST00000626086 82 ntBASIC-2.07□□□□□ -2.74
USF1P22415 MIR450A1-201ENST00000362262 91 ntBASIC-2.08□□□□□ -2.74
USF1P22415 SNORA63.4-201ENST00000362763 126 ntBASIC-2.08□□□□□ -2.74
USF1P22415 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.08□□□□□ -2.74
USF1P22415 RNU6-834P-201ENST00000362367 110 ntBASIC-2.09□□□□□ -2.74
USF1P22415 MIR579-201ENST00000385221 98 ntBASIC-2.09□□□□□ -2.74
USF1P22415 RNU6-172P-201ENST00000411000 93 ntBASIC-2.09□□□□□ -2.74
USF1P22415 AL031737.1-201ENST00000450125 223 ntBASIC-2.09□□□□□ -2.74
USF1P22415 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.09□□□□□ -2.74
USF1P22415 MIR3133-201ENST00000583157 78 ntBASIC-2.09□□□□□ -2.74
USF1P22415 FTX_4.1-201ENST00000616291 147 ntBASIC-2.09□□□□□ -2.74
USF1P22415 AC006160.2-201ENST00000637708 154 ntBASIC-2.09□□□□□ -2.74
USF1P22415 RNU6-755P-201ENST00000364400 103 ntBASIC-2.1□□□□□ -2.75
USF1P22415 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.1□□□□□ -2.75
USF1P22415 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.1□□□□□ -2.75
USF1P22415 RNU6-523P-201ENST00000516304 54 ntBASIC-2.1□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms