Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 MIR3675-201ENST00000583661 73 ntBASIC-1.55□□□□□ -2.66
VIMP08670 MIR664B-201ENST00000626756 61 ntBASIC-1.55□□□□□ -2.66
VIMP08670 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.56□□□□□ -2.66
VIMP08670 MIR1207-201ENST00000408249 87 ntBASIC-1.56□□□□□ -2.66
VIMP08670 RNU7-174P-201ENST00000516248 59 ntBASIC-1.56□□□□□ -2.66
VIMP08670 MIR23C-201ENST00000579846 100 ntBASIC-1.56□□□□□ -2.66
VIMP08670 RNU6-119P-201ENST00000364882 107 ntBASIC-1.57□□□□□ -2.66
VIMP08670 MIR488-201ENST00000365739 83 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-32P-201ENST00000383948 107 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-13P-201ENST00000384248 107 ntBASIC-1.57□□□□□ -2.66
VIMP08670 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-12P-201ENST00000384604 107 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-41P-201ENST00000384741 107 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-630P-201ENST00000391258 106 ntBASIC-1.57□□□□□ -2.66
VIMP08670 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-79P-201ENST00000362511 107 ntBASIC-1.58□□□□□ -2.66
VIMP08670 SNORA63.4-201ENST00000362763 126 ntBASIC-1.58□□□□□ -2.66
VIMP08670 RNU6-686P-201ENST00000364839 107 ntBASIC-1.58□□□□□ -2.66
VIMP08670 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.58□□□□□ -2.66
VIMP08670 AL606753.1-201ENST00000427435 87 ntBASIC-1.58□□□□□ -2.66
VIMP08670 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.58□□□□□ -2.66
VIMP08670 SNORD45.1-201ENST00000363181 77 ntBASIC-1.59□□□□□ -2.66
VIMP08670 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.59□□□□□ -2.66
VIMP08670 MIR496-201ENST00000385226 102 ntBASIC-1.59□□□□□ -2.66
VIMP08670 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.6□□□□□ -2.67
VIMP08670 RNU6-640P-201ENST00000363693 105 ntBASIC-1.6□□□□□ -2.67
VIMP08670 RNU6-608P-201ENST00000383927 104 ntBASIC-1.6□□□□□ -2.67
VIMP08670 RNU6-587P-201ENST00000391282 106 ntBASIC-1.6□□□□□ -2.67
VIMP08670 MIR4484-201ENST00000582855 83 ntBASIC-1.6□□□□□ -2.67
VIMP08670 MIR548V-201ENST00000584165 80 ntBASIC-1.6□□□□□ -2.67
VIMP08670 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.61□□□□□ -2.67
VIMP08670 RNU6-698P-201ENST00000363523 107 ntBASIC-1.61□□□□□ -2.67
VIMP08670 RNU6-34P-201ENST00000364874 107 ntBASIC-1.61□□□□□ -2.67
VIMP08670 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.61□□□□□ -2.67
VIMP08670 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.61□□□□□ -2.67
VIMP08670 MIR4723-201ENST00000585070 81 ntBASIC-1.61□□□□□ -2.67
VIMP08670 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.62□□□□□ -2.67
VIMP08670 RNU6-147P-201ENST00000383983 107 ntBASIC-1.62□□□□□ -2.67
VIMP08670 RNU6-129P-201ENST00000391022 107 ntBASIC-1.62□□□□□ -2.67
VIMP08670 AC074348.1-201ENST00000426503 132 ntBASIC-1.62□□□□□ -2.67
VIMP08670 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.62□□□□□ -2.67
VIMP08670 RNU6-980P-201ENST00000516925 103 ntBASIC-1.62□□□□□ -2.67
VIMP08670 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.63□□□□□ -2.67
VIMP08670 RNU6-598P-201ENST00000364017 105 ntBASIC-1.63□□□□□ -2.67
VIMP08670 U4.4-201ENST00000620626 117 ntBASIC-1.63□□□□□ -2.67
VIMP08670 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.64□□□□□ -2.67
VIMP08670 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.64□□□□□ -2.67
VIMP08670 MIR3139-201ENST00000579145 76 ntBASIC-1.64□□□□□ -2.67
VIMP08670 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.65□□□□□ -2.67
VIMP08670 RNU6-675P-201ENST00000384236 104 ntBASIC-1.65□□□□□ -2.67
VIMP08670 MIR520D-201ENST00000385002 87 ntBASIC-1.65□□□□□ -2.67
VIMP08670 MTND4LP1-201ENST00000446263 157 ntBASIC-1.65□□□□□ -2.67
VIMP08670 RNU6-844P-201ENST00000517175 102 ntBASIC-1.65□□□□□ -2.67
VIMP08670 U2.18-201ENST00000622185 84 ntBASIC-1.65□□□□□ -2.67
VIMP08670 RNU6-215P-201ENST00000365169 102 ntBASIC-1.66□□□□□ -2.68
VIMP08670 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.66□□□□□ -2.68
VIMP08670 SNORD20-201ENST00000384550 80 ntBASIC-1.66□□□□□ -2.68
VIMP08670 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.66□□□□□ -2.68
VIMP08670 RNU6-919P-201ENST00000516731 104 ntBASIC-1.66□□□□□ -2.68
VIMP08670 AC006160.2-201ENST00000637708 154 ntBASIC-1.66□□□□□ -2.68
VIMP08670 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.66□□□□□ -2.68
VIMP08670 RNA5SP405-201ENST00000363059 114 ntBASIC-1.67□□□□□ -2.68
VIMP08670 MIR630-201ENST00000384957 97 ntBASIC-1.67□□□□□ -2.68
VIMP08670 RNU6-695P-201ENST00000391157 104 ntBASIC-1.67□□□□□ -2.68
VIMP08670 AL603908.1-201ENST00000406098 201 ntBASIC-1.67□□□□□ -2.68
VIMP08670 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.69□□□□□ -2.68
VIMP08670 MIR548AA1-201ENST00000384971 97 ntBASIC-1.69□□□□□ -2.68
VIMP08670 MT-TM-201ENST00000387377 68 ntBASIC-1.69□□□□□ -2.68
VIMP08670 MIR3170-201ENST00000582699 77 ntBASIC-1.69□□□□□ -2.68
VIMP08670 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.69□□□□□ -2.68
VIMP08670 RNU6-247P-201ENST00000362636 107 ntBASIC-1.7□□□□□ -2.68
VIMP08670 RNA5SP215-201ENST00000363440 122 ntBASIC-1.7□□□□□ -2.68
VIMP08670 RNU6-194P-201ENST00000363862 105 ntBASIC-1.7□□□□□ -2.68
VIMP08670 RNA5SP173-201ENST00000364857 136 ntBASIC-1.7□□□□□ -2.68
VIMP08670 SNORD113-2-201ENST00000391082 72 ntBASIC-1.7□□□□□ -2.68
VIMP08670 AC120024.2-201ENST00000576526 175 ntBASIC-1.7□□□□□ -2.68
VIMP08670 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.71□□□□□ -2.68
VIMP08670 RNU6-668P-201ENST00000364180 107 ntBASIC-1.71□□□□□ -2.68
VIMP08670 SNORD54-201ENST00000459159 67 ntBASIC-1.71□□□□□ -2.68
VIMP08670 MIR1297-201ENST00000637311 77 ntBASIC-1.71□□□□□ -2.68
VIMP08670 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.72□□□□□ -2.68
VIMP08670 SNORD116-16-201ENST00000384533 92 ntBASIC-1.72□□□□□ -2.68
VIMP08670 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
VIMP08670 RNU6-380P-201ENST00000410207 107 ntBASIC-1.72□□□□□ -2.68
VIMP08670 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.72□□□□□ -2.68
VIMP08670 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.72□□□□□ -2.68
VIMP08670 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.72□□□□□ -2.68
VIMP08670 MIR664A-201ENST00000626086 82 ntBASIC-1.72□□□□□ -2.68
VIMP08670 MIR8053-201ENST00000613344 75 ntBASIC-1.73□□□□□ -2.69
VIMP08670 SNORD45A-201ENST00000384512 84 ntBASIC-1.74□□□□□ -2.69
VIMP08670 RNU6-995P-201ENST00000391244 107 ntBASIC-1.74□□□□□ -2.69
VIMP08670 RNU6-789P-201ENST00000517105 102 ntBASIC-1.74□□□□□ -2.69
VIMP08670 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.74□□□□□ -2.69
VIMP08670 SNORD113.1-201ENST00000363280 73 ntBASIC-1.75□□□□□ -2.69
VIMP08670 RNU6-841P-201ENST00000383872 107 ntBASIC-1.75□□□□□ -2.69
VIMP08670 RNU6-563P-201ENST00000364872 108 ntBASIC-1.76□□□□□ -2.69
VIMP08670 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.76□□□□□ -2.69
VIMP08670 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.76□□□□□ -2.69
VIMP08670 MIR3123-201ENST00000583417 75 ntBASIC-1.76□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 251.6 ms