Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 RNU6-787P-201ENST00000384032 107 ntBASIC-1.04□□□□□ -2.58
MMP1P03956 MIR527-201ENST00000385244 85 ntBASIC-1.04□□□□□ -2.58
MMP1P03956 MIR4666B-201ENST00000578142 81 ntBASIC-1.04□□□□□ -2.58
MMP1P03956 MIR5582-201ENST00000579697 68 ntBASIC-1.04□□□□□ -2.58
MMP1P03956 MIR4723-201ENST00000585070 81 ntBASIC-1.04□□□□□ -2.58
MMP1P03956 MIR6818-201ENST00000621576 65 ntBASIC-1.04□□□□□ -2.58
MMP1P03956 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.05□□□□□ -2.58
MMP1P03956 MIR587-201ENST00000384845 96 ntBASIC-1.05□□□□□ -2.58
MMP1P03956 MIR630-201ENST00000384957 97 ntBASIC-1.05□□□□□ -2.58
MMP1P03956 RNU7-134P-201ENST00000458997 64 ntBASIC-1.05□□□□□ -2.58
MMP1P03956 RNA5SP215-201ENST00000363440 122 ntBASIC-1.06□□□□□ -2.58
MMP1P03956 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.06□□□□□ -2.58
MMP1P03956 MIR5683-201ENST00000636514 76 ntBASIC-1.06□□□□□ -2.58
MMP1P03956 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.07□□□□□ -2.58
MMP1P03956 RNU6-696P-201ENST00000390834 107 ntBASIC-1.07□□□□□ -2.58
MMP1P03956 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.07□□□□□ -2.58
MMP1P03956 RNU6-598P-201ENST00000364017 105 ntBASIC-1.08□□□□□ -2.58
MMP1P03956 RNU6-242P-201ENST00000384359 107 ntBASIC-1.08□□□□□ -2.58
MMP1P03956 SNORD116-24-201ENST00000384549 92 ntBASIC-1.08□□□□□ -2.58
MMP1P03956 MIR507-201ENST00000385234 94 ntBASIC-1.08□□□□□ -2.58
MMP1P03956 SNORD113-2-201ENST00000391082 72 ntBASIC-1.08□□□□□ -2.58
MMP1P03956 SCARNA17-201ENST00000516183 144 ntBASIC-1.08□□□□□ -2.58
MMP1P03956 RNU6-70P-201ENST00000516438 60 ntBASIC-1.08□□□□□ -2.58
MMP1P03956 MIR4324-201ENST00000584846 72 ntBASIC-1.09□□□□□ -2.58
MMP1P03956 SNORD115-31-201ENST00000365318 82 ntBASIC-1.1□□□□□ -2.59
MMP1P03956 MIR3134-201ENST00000579433 74 ntBASIC-1.1□□□□□ -2.59
MMP1P03956 AC062037.1-201ENST00000605302 128 ntBASIC-1.1□□□□□ -2.59
MMP1P03956 MIR6738-201ENST00000619620 64 ntBASIC-1.1□□□□□ -2.59
MMP1P03956 MIR198-201ENST00000637333 62 ntBASIC-1.1□□□□□ -2.59
MMP1P03956 MIR429-201ENST00000362106 83 ntBASIC-1.11□□□□□ -2.59
MMP1P03956 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.11□□□□□ -2.59
MMP1P03956 MIR4490-201ENST00000582647 84 ntBASIC-1.11□□□□□ -2.59
MMP1P03956 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.12□□□□□ -2.59
MMP1P03956 RNU6-820P-201ENST00000384273 107 ntBASIC-1.12□□□□□ -2.59
MMP1P03956 SNORD116-16-201ENST00000384533 92 ntBASIC-1.12□□□□□ -2.59
MMP1P03956 SNORA41B-201ENST00000384785 128 ntBASIC-1.12□□□□□ -2.59
MMP1P03956 MIR154-201ENST00000385243 84 ntBASIC-1.12□□□□□ -2.59
MMP1P03956 MIR548Q-201ENST00000408404 100 ntBASIC-1.12□□□□□ -2.59
MMP1P03956 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.12□□□□□ -2.59
MMP1P03956 MIR378F-201ENST00000578143 78 ntBASIC-1.12□□□□□ -2.59
MMP1P03956 U2.18-201ENST00000622185 84 ntBASIC-1.12□□□□□ -2.59
MMP1P03956 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.13□□□□□ -2.59
MMP1P03956 RNU6-687P-201ENST00000516443 89 ntBASIC-1.13□□□□□ -2.59
MMP1P03956 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.14□□□□□ -2.59
MMP1P03956 RPL35AP4-201ENST00000412007 102 ntBASIC-1.14□□□□□ -2.59
MMP1P03956 RNU6-10P-201ENST00000384036 107 ntBASIC-1.15□□□□□ -2.59
MMP1P03956 MIR520D-201ENST00000385002 87 ntBASIC-1.15□□□□□ -2.59
MMP1P03956 MIR601-201ENST00000385256 79 ntBASIC-1.15□□□□□ -2.59
MMP1P03956 RNU6-630P-201ENST00000391258 106 ntBASIC-1.16□□□□□ -2.6
MMP1P03956 AC090616.4-201ENST00000448026 115 ntBASIC-1.16□□□□□ -2.6
MMP1P03956 RNA5SP173-201ENST00000364857 136 ntBASIC-1.17□□□□□ -2.6
MMP1P03956 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.17□□□□□ -2.6
MMP1P03956 RNU6-895P-201ENST00000384125 103 ntBASIC-1.17□□□□□ -2.6
MMP1P03956 RNU6-576P-201ENST00000390854 102 ntBASIC-1.17□□□□□ -2.6
MMP1P03956 SNORD1B-201ENST00000363091 84 ntBASIC-1.18□□□□□ -2.6
MMP1P03956 RNU6-164P-201ENST00000364604 103 ntBASIC-1.18□□□□□ -2.6
MMP1P03956 RNU6-608P-201ENST00000383927 104 ntBASIC-1.18□□□□□ -2.6
MMP1P03956 MIR4306-201ENST00000583390 91 ntBASIC-1.18□□□□□ -2.6
MMP1P03956 MIR4320-201ENST00000636981 65 ntBASIC-1.18□□□□□ -2.6
MMP1P03956 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.2□□□□□ -2.6
MMP1P03956 RNA5SP170-201ENST00000517150 101 ntBASIC-1.2□□□□□ -2.6
MMP1P03956 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.21□□□□□ -2.6
MMP1P03956 AC091912.2-201ENST00000624798 167 ntBASIC-1.21□□□□□ -2.6
MMP1P03956 SNORD73B-201ENST00000364394 72 ntBASIC-1.22□□□□□ -2.6
MMP1P03956 RNU6-411P-201ENST00000384451 107 ntBASIC-1.22□□□□□ -2.6
MMP1P03956 MIR548AA1-201ENST00000384971 97 ntBASIC-1.22□□□□□ -2.6
MMP1P03956 MIR8485-201ENST00000401372 91 ntBASIC-1.22□□□□□ -2.6
MMP1P03956 MIR3170-201ENST00000582699 77 ntBASIC-1.22□□□□□ -2.6
MMP1P03956 MIR6874-201ENST00000635894 71 ntBASIC-1.22□□□□□ -2.6
MMP1P03956 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.23□□□□□ -2.61
MMP1P03956 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.23□□□□□ -2.61
MMP1P03956 RNU6-542P-201ENST00000516405 103 ntBASIC-1.23□□□□□ -2.61
MMP1P03956 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.23□□□□□ -2.61
MMP1P03956 U7.4-201ENST00000614961 63 ntBASIC-1.23□□□□□ -2.61
MMP1P03956 RNU6-540P-201ENST00000384622 101 ntBASIC-1.25□□□□□ -2.61
MMP1P03956 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
MMP1P03956 MIR889-201ENST00000401280 79 ntBASIC-1.25□□□□□ -2.61
MMP1P03956 RNU6-573P-201ENST00000383938 106 ntBASIC-1.26□□□□□ -2.61
MMP1P03956 RNU6-24P-201ENST00000384440 107 ntBASIC-1.26□□□□□ -2.61
MMP1P03956 RNU6-634P-201ENST00000459134 106 ntBASIC-1.26□□□□□ -2.61
MMP1P03956 RNU6-523P-201ENST00000516304 54 ntBASIC-1.26□□□□□ -2.61
MMP1P03956 MIR3202-2-201ENST00000635980 79 ntBASIC-1.26□□□□□ -2.61
MMP1P03956 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.27□□□□□ -2.61
MMP1P03956 RNU6-258P-201ENST00000390884 101 ntBASIC-1.27□□□□□ -2.61
MMP1P03956 RNY4P29-201ENST00000410801 97 ntBASIC-1.27□□□□□ -2.61
MMP1P03956 RNU7-151P-201ENST00000516930 53 ntBASIC-1.27□□□□□ -2.61
MMP1P03956 RNU6-92P-201ENST00000605893 104 ntBASIC-1.27□□□□□ -2.61
MMP1P03956 RNU6-228P-201ENST00000362700 106 ntBASIC-1.28□□□□□ -2.61
MMP1P03956 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.28□□□□□ -2.61
MMP1P03956 RNU6-172P-201ENST00000411000 93 ntBASIC-1.28□□□□□ -2.61
MMP1P03956 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.28□□□□□ -2.61
MMP1P03956 RNA5SP192-201ENST00000364404 120 ntBASIC-1.29□□□□□ -2.62
MMP1P03956 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.29□□□□□ -2.62
MMP1P03956 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.29□□□□□ -2.62
MMP1P03956 MIR7978-201ENST00000636158 59 ntBASIC-1.29□□□□□ -2.62
MMP1P03956 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.3□□□□□ -2.62
MMP1P03956 AC018880.2-201ENST00000414265 201 ntBASIC-1.3□□□□□ -2.62
MMP1P03956 MIR3115-201ENST00000577915 68 ntBASIC-1.3□□□□□ -2.62
MMP1P03956 MIR3165-201ENST00000579874 75 ntBASIC-1.3□□□□□ -2.62
MMP1P03956 MIR6502-201ENST00000617296 76 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms