Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
COL4A1P02462 RPL35AP4-201ENST00000412007 102 ntBASIC-0.97□□□□□ -2.56
COL4A1P02462 MIR6502-201ENST00000617296 76 ntBASIC-0.97□□□□□ -2.56
COL4A1P02462 MIR548BB-201ENST00000626714 66 ntBASIC-0.97□□□□□ -2.56
COL4A1P02462 SNORD113.1-201ENST00000363280 73 ntBASIC-0.97□□□□□ -2.57
COL4A1P02462 RNU6-478P-201ENST00000363904 110 ntBASIC-0.97□□□□□ -2.57
COL4A1P02462 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.98□□□□□ -2.57
COL4A1P02462 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.98□□□□□ -2.57
COL4A1P02462 RNU6-219P-201ENST00000364728 107 ntBASIC-0.98□□□□□ -2.57
COL4A1P02462 MIR548C-201ENST00000384815 97 ntBASIC-0.98□□□□□ -2.57
COL4A1P02462 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.98□□□□□ -2.57
COL4A1P02462 RNU6-630P-201ENST00000391258 106 ntBASIC-0.98□□□□□ -2.57
COL4A1P02462 RNU6-755P-201ENST00000364400 103 ntBASIC-0.99□□□□□ -2.57
COL4A1P02462 RNU6-686P-201ENST00000364839 107 ntBASIC-0.99□□□□□ -2.57
COL4A1P02462 RNU6-980P-201ENST00000516925 103 ntBASIC-0.99□□□□□ -2.57
COL4A1P02462 MIR4520-1-201ENST00000582609 70 ntBASIC-0.99□□□□□ -2.57
COL4A1P02462 Y_RNA.219-201ENST00000364232 113 ntBASIC-1□□□□□ -2.57
COL4A1P02462 MIR548AA1-201ENST00000384971 97 ntBASIC-1□□□□□ -2.57
COL4A1P02462 MTND4LP1-201ENST00000446263 157 ntBASIC-1□□□□□ -2.57
COL4A1P02462 RNU6-168P-201ENST00000516189 101 ntBASIC-1□□□□□ -2.57
COL4A1P02462 MIR23C-201ENST00000579846 100 ntBASIC-1□□□□□ -2.57
COL4A1P02462 RNU6-497P-201ENST00000365316 104 ntBASIC-1□□□□□ -2.57
COL4A1P02462 MALAT1.1-201ENST00000618249 95 ntBASIC-1□□□□□ -2.57
COL4A1P02462 MIR429-201ENST00000362106 83 ntBASIC-1.01□□□□□ -2.57
COL4A1P02462 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.01□□□□□ -2.57
COL4A1P02462 RNU6-129P-201ENST00000391022 107 ntBASIC-1.01□□□□□ -2.57
COL4A1P02462 MIR6874-201ENST00000635894 71 ntBASIC-1.01□□□□□ -2.57
COL4A1P02462 RNY1P1-201ENST00000364372 112 ntBASIC-1.02□□□□□ -2.57
COL4A1P02462 RNU6-380P-201ENST00000410207 107 ntBASIC-1.02□□□□□ -2.57
COL4A1P02462 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.03□□□□□ -2.57
COL4A1P02462 RNU6-675P-201ENST00000384236 104 ntBASIC-1.03□□□□□ -2.57
COL4A1P02462 AL606753.1-201ENST00000427435 87 ntBASIC-1.03□□□□□ -2.57
COL4A1P02462 MIR664A-201ENST00000626086 82 ntBASIC-1.03□□□□□ -2.57
COL4A1P02462 SNORD20-201ENST00000384550 80 ntBASIC-1.04□□□□□ -2.58
COL4A1P02462 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.04□□□□□ -2.58
COL4A1P02462 MIR3668-201ENST00000582138 75 ntBASIC-1.04□□□□□ -2.58
COL4A1P02462 IGLL4P-201ENST00000614590 133 ntBASIC-1.04□□□□□ -2.58
COL4A1P02462 RNU6-598P-201ENST00000364017 105 ntBASIC-1.04□□□□□ -2.58
COL4A1P02462 RNU6-668P-201ENST00000364180 107 ntBASIC-1.04□□□□□ -2.58
COL4A1P02462 RNU6-402P-201ENST00000410678 103 ntBASIC-1.04□□□□□ -2.58
COL4A1P02462 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.04□□□□□ -2.58
COL4A1P02462 RNU7-151P-201ENST00000516930 53 ntBASIC-1.04□□□□□ -2.58
COL4A1P02462 MIR3910-1-201ENST00000580936 111 ntBASIC-1.04□□□□□ -2.58
COL4A1P02462 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.05□□□□□ -2.58
COL4A1P02462 RNU6-608P-201ENST00000383927 104 ntBASIC-1.05□□□□□ -2.58
COL4A1P02462 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.05□□□□□ -2.58
COL4A1P02462 RNU6-70P-201ENST00000516438 60 ntBASIC-1.05□□□□□ -2.58
COL4A1P02462 RNU6-979P-201ENST00000383896 107 ntBASIC-1.06□□□□□ -2.58
COL4A1P02462 U2.18-201ENST00000622185 84 ntBASIC-1.06□□□□□ -2.58
COL4A1P02462 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.07□□□□□ -2.58
COL4A1P02462 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.07□□□□□ -2.58
COL4A1P02462 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.07□□□□□ -2.58
COL4A1P02462 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.07□□□□□ -2.58
COL4A1P02462 AC120024.2-201ENST00000576526 175 ntBASIC-1.07□□□□□ -2.58
COL4A1P02462 MIR3170-201ENST00000582699 77 ntBASIC-1.07□□□□□ -2.58
COL4A1P02462 MIR488-201ENST00000365739 83 ntBASIC-1.07□□□□□ -2.58
COL4A1P02462 SNORD116-16-201ENST00000384533 92 ntBASIC-1.07□□□□□ -2.58
COL4A1P02462 MIR154-201ENST00000385243 84 ntBASIC-1.07□□□□□ -2.58
COL4A1P02462 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.07□□□□□ -2.58
COL4A1P02462 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.07□□□□□ -2.58
COL4A1P02462 SNORD18.1-201ENST00000363807 70 ntBASIC-1.08□□□□□ -2.58
COL4A1P02462 SNORA41B-201ENST00000384785 128 ntBASIC-1.08□□□□□ -2.58
COL4A1P02462 MT-TR-201ENST00000387439 65 ntBASIC-1.08□□□□□ -2.58
COL4A1P02462 RNU6-604P-201ENST00000390917 100 ntBASIC-1.08□□□□□ -2.58
COL4A1P02462 RNU6-695P-201ENST00000391157 104 ntBASIC-1.08□□□□□ -2.58
COL4A1P02462 MIR548H1-201ENST00000408610 102 ntBASIC-1.08□□□□□ -2.58
COL4A1P02462 RNY4P30-201ENST00000410216 95 ntBASIC-1.08□□□□□ -2.58
COL4A1P02462 RNU6-313P-201ENST00000516317 112 ntBASIC-1.08□□□□□ -2.58
COL4A1P02462 RNU6-542P-201ENST00000516405 103 ntBASIC-1.08□□□□□ -2.58
COL4A1P02462 RNU6-844P-201ENST00000517175 102 ntBASIC-1.08□□□□□ -2.58
COL4A1P02462 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.08□□□□□ -2.58
COL4A1P02462 SNORD45A-201ENST00000384512 84 ntBASIC-1.09□□□□□ -2.58
COL4A1P02462 MIR520D-201ENST00000385002 87 ntBASIC-1.09□□□□□ -2.58
COL4A1P02462 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.09□□□□□ -2.58
COL4A1P02462 MIR3139-201ENST00000579145 76 ntBASIC-1.09□□□□□ -2.58
COL4A1P02462 RNU6-228P-201ENST00000362700 106 ntBASIC-1.1□□□□□ -2.58
COL4A1P02462 RNU6-147P-201ENST00000383983 107 ntBASIC-1.1□□□□□ -2.58
COL4A1P02462 MIR4484-201ENST00000582855 83 ntBASIC-1.1□□□□□ -2.58
COL4A1P02462 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.1□□□□□ -2.59
COL4A1P02462 RNU6-32P-201ENST00000383948 107 ntBASIC-1.1□□□□□ -2.59
COL4A1P02462 RNU6-13P-201ENST00000384248 107 ntBASIC-1.1□□□□□ -2.59
COL4A1P02462 RNU6-12P-201ENST00000384604 107 ntBASIC-1.1□□□□□ -2.59
COL4A1P02462 RNU6-41P-201ENST00000384741 107 ntBASIC-1.1□□□□□ -2.59
COL4A1P02462 RNU6-919P-201ENST00000516731 104 ntBASIC-1.1□□□□□ -2.59
COL4A1P02462 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.11□□□□□ -2.59
COL4A1P02462 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.11□□□□□ -2.59
COL4A1P02462 RNU7-171P-201ENST00000459581 62 ntBASIC-1.11□□□□□ -2.59
COL4A1P02462 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.11□□□□□ -2.59
COL4A1P02462 SNORA27.2-201ENST00000363365 126 ntBASIC-1.12□□□□□ -2.59
COL4A1P02462 RNU6-640P-201ENST00000363693 105 ntBASIC-1.12□□□□□ -2.59
COL4A1P02462 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.12□□□□□ -2.59
COL4A1P02462 RNU6-44P-201ENST00000384045 107 ntBASIC-1.12□□□□□ -2.59
COL4A1P02462 RNA5SP86-201ENST00000390869 98 ntBASIC-1.12□□□□□ -2.59
COL4A1P02462 AC005520.4-201ENST00000604337 90 ntBASIC-1.12□□□□□ -2.59
COL4A1P02462 RNU6-315P-201ENST00000362666 107 ntBASIC-1.13□□□□□ -2.59
COL4A1P02462 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.13□□□□□ -2.59
COL4A1P02462 MIR1245B-201ENST00000636115 69 ntBASIC-1.13□□□□□ -2.59
COL4A1P02462 RNU6-247P-201ENST00000362636 107 ntBASIC-1.13□□□□□ -2.59
COL4A1P02462 SNORA63.4-201ENST00000362763 126 ntBASIC-1.13□□□□□ -2.59
COL4A1P02462 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms