Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MIR363-201ENST00000384840 75 ntBASIC-2.28□□□□□ -2.77
ABCA1O95477 MIR656-201ENST00000385224 78 ntBASIC-2.28□□□□□ -2.77
ABCA1O95477 MTND4LP1-201ENST00000446263 157 ntBASIC-2.28□□□□□ -2.77
ABCA1O95477 RNU7-197P-201ENST00000458836 62 ntBASIC-2.28□□□□□ -2.77
ABCA1O95477 RNU6-537P-201ENST00000517277 103 ntBASIC-2.28□□□□□ -2.77
ABCA1O95477 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.28□□□□□ -2.77
ABCA1O95477 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.28□□□□□ -2.77
ABCA1O95477 AC072026.1-201ENST00000605023 201 ntBASIC-2.29□□□□□ -2.78
ABCA1O95477 RNU6-624P-201ENST00000363411 107 ntBASIC-2.29□□□□□ -2.78
ABCA1O95477 RNU7-153P-201ENST00000516455 62 ntBASIC-2.29□□□□□ -2.78
ABCA1O95477 SNORD116.2-201ENST00000391251 93 ntBASIC-2.3□□□□□ -2.78
ABCA1O95477 RNU7-61P-201ENST00000515897 61 ntBASIC-2.3□□□□□ -2.78
ABCA1O95477 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.3□□□□□ -2.78
ABCA1O95477 AL450471.1-201ENST00000447509 127 ntBASIC-2.3□□□□□ -2.78
ABCA1O95477 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.3□□□□□ -2.78
ABCA1O95477 RNU6-742P-201ENST00000365289 107 ntBASIC-2.31□□□□□ -2.78
ABCA1O95477 RNU6-635P-201ENST00000516651 102 ntBASIC-2.31□□□□□ -2.78
ABCA1O95477 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.31□□□□□ -2.78
ABCA1O95477 RNA5SP173-201ENST00000364857 136 ntBASIC-2.31□□□□□ -2.78
ABCA1O95477 RNU6-182P-201ENST00000516970 105 ntBASIC-2.31□□□□□ -2.78
ABCA1O95477 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.32□□□□□ -2.78
ABCA1O95477 RNU6-810P-201ENST00000364001 107 ntBASIC-2.32□□□□□ -2.78
ABCA1O95477 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.32□□□□□ -2.78
ABCA1O95477 RNU4-40P-201ENST00000364351 143 ntBASIC-2.32□□□□□ -2.78
ABCA1O95477 MIR1236-201ENST00000408340 102 ntBASIC-2.32□□□□□ -2.78
ABCA1O95477 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.32□□□□□ -2.78
ABCA1O95477 RNU6-330P-201ENST00000363015 107 ntBASIC-2.33□□□□□ -2.78
ABCA1O95477 RNU6-639P-201ENST00000384074 107 ntBASIC-2.33□□□□□ -2.78
ABCA1O95477 RNU6-1137P-201ENST00000517073 99 ntBASIC-2.33□□□□□ -2.78
ABCA1O95477 MIR7110-201ENST00000612638 86 ntBASIC-2.33□□□□□ -2.78
ABCA1O95477 SNORD45.1-201ENST00000363181 77 ntBASIC-2.33□□□□□ -2.78
ABCA1O95477 RNU6-875P-201ENST00000516488 106 ntBASIC-2.33□□□□□ -2.78
ABCA1O95477 SNORA81.3-201ENST00000517283 198 ntBASIC-2.33□□□□□ -2.78
ABCA1O95477 AP001340.1-201ENST00000624405 217 ntBASIC-2.33□□□□□ -2.78
ABCA1O95477 Y_RNA.431-201ENST00000384086 102 ntBASIC-2.34□□□□□ -2.78
ABCA1O95477 MT-TD-201ENST00000387419 68 ntBASIC-2.34□□□□□ -2.78
ABCA1O95477 SNORD45.2-201ENST00000363552 72 ntBASIC-2.34□□□□□ -2.78
ABCA1O95477 MIR519C-201ENST00000385053 87 ntBASIC-2.35□□□□□ -2.79
ABCA1O95477 RNA5SP215-201ENST00000363440 122 ntBASIC-2.35□□□□□ -2.79
ABCA1O95477 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.35□□□□□ -2.79
ABCA1O95477 SNORD60.1-201ENST00000362451 73 ntBASIC-2.36□□□□□ -2.79
ABCA1O95477 RNU6-788P-201ENST00000390967 104 ntBASIC-2.36□□□□□ -2.79
ABCA1O95477 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.36□□□□□ -2.79
ABCA1O95477 RNU6-303P-201ENST00000517091 106 ntBASIC-2.36□□□□□ -2.79
ABCA1O95477 SNORD45C-201ENST00000383893 79 ntBASIC-2.37□□□□□ -2.79
ABCA1O95477 AC139453.2-201ENST00000487255 133 ntBASIC-2.37□□□□□ -2.79
ABCA1O95477 MIR8062-201ENST00000621515 85 ntBASIC-2.37□□□□□ -2.79
ABCA1O95477 AC139792.2-201ENST00000624218 587 ntBASIC-2.37□□□□□ -2.79
ABCA1O95477 SNORD113.1-201ENST00000363280 73 ntBASIC-2.38□□□□□ -2.79
ABCA1O95477 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.38□□□□□ -2.79
ABCA1O95477 RNU6-474P-201ENST00000384243 107 ntBASIC-2.38□□□□□ -2.79
ABCA1O95477 RNU6-196P-201ENST00000384315 107 ntBASIC-2.38□□□□□ -2.79
ABCA1O95477 SNORA40B-201ENST00000385573 128 ntBASIC-2.38□□□□□ -2.79
ABCA1O95477 SNORD115.2-201ENST00000391126 59 ntBASIC-2.38□□□□□ -2.79
ABCA1O95477 RNU6-915P-201ENST00000364943 103 ntBASIC-2.39□□□□□ -2.79
ABCA1O95477 RNU6-604P-201ENST00000390917 100 ntBASIC-2.39□□□□□ -2.79
ABCA1O95477 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.39□□□□□ -2.79
ABCA1O95477 MIR3171-201ENST00000584270 74 ntBASIC-2.39□□□□□ -2.79
ABCA1O95477 RNU6-92P-201ENST00000605893 104 ntBASIC-2.39□□□□□ -2.79
ABCA1O95477 RNU6-1020P-201ENST00000363684 107 ntBASIC-2.4□□□□□ -2.79
ABCA1O95477 SNORD58C-201ENST00000365223 64 ntBASIC-2.4□□□□□ -2.79
ABCA1O95477 MIR545-201ENST00000385085 106 ntBASIC-2.4□□□□□ -2.79
ABCA1O95477 Y_RNA.202-201ENST00000364083 110 ntBASIC-2.41□□□□□ -2.8
ABCA1O95477 RNU6-422P-201ENST00000384632 107 ntBASIC-2.41□□□□□ -2.8
ABCA1O95477 MIR4795-201ENST00000584182 89 ntBASIC-2.41□□□□□ -2.8
ABCA1O95477 RNU4-85P-201ENST00000364675 123 ntBASIC-2.42□□□□□ -2.8
ABCA1O95477 SNORA33.2-201ENST00000365413 134 ntBASIC-2.42□□□□□ -2.8
ABCA1O95477 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.42□□□□□ -2.8
ABCA1O95477 SNORD45A-201ENST00000384512 84 ntBASIC-2.42□□□□□ -2.8
ABCA1O95477 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.42□□□□□ -2.8
ABCA1O95477 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.42□□□□□ -2.8
ABCA1O95477 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.42□□□□□ -2.8
ABCA1O95477 SNORA40.16-201ENST00000517238 121 ntBASIC-2.42□□□□□ -2.8
ABCA1O95477 SNORA8.1-201ENST00000384250 140 ntBASIC-2.43□□□□□ -2.8
ABCA1O95477 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.43□□□□□ -2.8
ABCA1O95477 RNU6-887P-201ENST00000410660 100 ntBASIC-2.43□□□□□ -2.8
ABCA1O95477 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.43□□□□□ -2.8
ABCA1O95477 MTND5P20-201ENST00000448677 143 ntBASIC-2.43□□□□□ -2.8
ABCA1O95477 U6atac.1-201ENST00000616025 117 ntBASIC-2.43□□□□□ -2.8
ABCA1O95477 MIR4317-201ENST00000637586 65 ntBASIC-2.43□□□□□ -2.8
ABCA1O95477 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.44□□□□□ -2.8
ABCA1O95477 Y_RNA.350-201ENST00000365409 98 ntBASIC-2.45□□□□□ -2.8
ABCA1O95477 RNU6-162P-201ENST00000516228 103 ntBASIC-2.45□□□□□ -2.8
ABCA1O95477 RNU6-267P-201ENST00000516714 103 ntBASIC-2.45□□□□□ -2.8
ABCA1O95477 Y_RNA.138-201ENST00000363462 102 ntBASIC-2.45□□□□□ -2.8
ABCA1O95477 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.45□□□□□ -2.8
ABCA1O95477 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.45□□□□□ -2.8
ABCA1O95477 RNU6-772P-201ENST00000516042 105 ntBASIC-2.45□□□□□ -2.8
ABCA1O95477 RNU6-795P-201ENST00000516323 103 ntBASIC-2.45□□□□□ -2.8
ABCA1O95477 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.46□□□□□ -2.8
ABCA1O95477 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.47□□□□□ -2.8
ABCA1O95477 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.47□□□□□ -2.8
ABCA1O95477 SCARNA23-201ENST00000516060 130 ntBASIC-2.47□□□□□ -2.8
ABCA1O95477 RNU6-789P-201ENST00000517105 102 ntBASIC-2.47□□□□□ -2.8
ABCA1O95477 Y_RNA.200-201ENST00000364018 102 ntBASIC-2.47□□□□□ -2.81
ABCA1O95477 MIR548H4-201ENST00000408689 111 ntBASIC-2.47□□□□□ -2.81
ABCA1O95477 AC074348.1-201ENST00000426503 132 ntBASIC-2.48□□□□□ -2.81
ABCA1O95477 AC022559.1-201ENST00000520905 205 ntBASIC-2.48□□□□□ -2.81
ABCA1O95477 AP001318.4-201ENST00000616637 121 ntBASIC-2.48□□□□□ -2.81
ABCA1O95477 AL035470.1-201ENST00000622571 220 ntBASIC-2.48□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 250.6 ms