Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 Y_RNA.223-201ENST00000364290 113 ntBASIC1.09□□□□□ -2.23
GFRA3O60609 RPS29P23-201ENST00000458635 123 ntBASIC1.09□□□□□ -2.23
GFRA3O60609 AC068338.1-201ENST00000565567 176 ntBASIC1.08□□□□□ -2.24
GFRA3O60609 MIR4714-201ENST00000580728 77 ntBASIC1.08□□□□□ -2.24
GFRA3O60609 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC1.08□□□□□ -2.24
GFRA3O60609 MIR330-201ENST00000362196 94 ntBASIC1.07□□□□□ -2.24
GFRA3O60609 Y_RNA.260-201ENST00000364628 101 ntBASIC1.07□□□□□ -2.24
GFRA3O60609 MIR936-201ENST00000401264 98 ntBASIC1.07□□□□□ -2.24
GFRA3O60609 MIR6857-201ENST00000613267 93 ntBASIC1.07□□□□□ -2.24
GFRA3O60609 MIR3973-201ENST00000579824 107 ntBASIC1.06□□□□□ -2.24
GFRA3O60609 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
GFRA3O60609 RNU6-455P-201ENST00000384681 107 ntBASIC1.05□□□□□ -2.24
GFRA3O60609 MIR1197-201ENST00000408818 88 ntBASIC1.05□□□□□ -2.24
GFRA3O60609 SNORD71-201ENST00000411292 86 ntBASIC1.05□□□□□ -2.24
GFRA3O60609 AC108740.1-201ENST00000498629 225 ntBASIC1.05□□□□□ -2.24
GFRA3O60609 SNORA26.4-201ENST00000391188 123 ntBASIC1.04□□□□□ -2.24
GFRA3O60609 MIR26B-201ENST00000362251 77 ntBASIC1.03□□□□□ -2.24
GFRA3O60609 RPL35AP4-201ENST00000412007 102 ntBASIC1.03□□□□□ -2.24
GFRA3O60609 AL353691.2-201ENST00000443795 59 ntBASIC1.03□□□□□ -2.24
GFRA3O60609 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
GFRA3O60609 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
GFRA3O60609 SNORD56B-201ENST00000384713 71 ntBASIC1.02□□□□□ -2.25
GFRA3O60609 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
GFRA3O60609 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC1.02□□□□□ -2.25
GFRA3O60609 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
GFRA3O60609 MIR548AJ2-201ENST00000408539 92 ntBASIC1.01□□□□□ -2.25
GFRA3O60609 RNU7-129P-201ENST00000516128 62 ntBASIC1.01□□□□□ -2.25
GFRA3O60609 MIR150-201ENST00000385048 84 ntBASIC1□□□□□ -2.25
GFRA3O60609 uc_338.17-201ENST00000619633 179 ntBASIC1□□□□□ -2.25
GFRA3O60609 SNORD115-33-201ENST00000363723 82 ntBASIC0.99□□□□□ -2.25
GFRA3O60609 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
GFRA3O60609 RNU6-1169P-201ENST00000363537 103 ntBASIC0.98□□□□□ -2.25
GFRA3O60609 U6.97-201ENST00000636904 101 ntBASIC0.98□□□□□ -2.25
GFRA3O60609 SNORD45C-201ENST00000383893 79 ntBASIC0.97□□□□□ -2.25
GFRA3O60609 MIR379-201ENST00000362218 67 ntBASIC0.96□□□□□ -2.26
GFRA3O60609 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
GFRA3O60609 VTRNA1-3-201ENST00000365645 89 ntBASIC0.96□□□□□ -2.26
GFRA3O60609 RNU6-929P-201ENST00000384429 107 ntBASIC0.96□□□□□ -2.26
GFRA3O60609 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
GFRA3O60609 FTX_4.1-201ENST00000616291 147 ntBASIC0.96□□□□□ -2.26
GFRA3O60609 MIR5087-201ENST00000635826 76 ntBASIC0.95□□□□□ -2.26
GFRA3O60609 Y_RNA.335-201ENST00000365299 96 ntBASIC0.94□□□□□ -2.26
GFRA3O60609 RNU6-939P-201ENST00000384634 107 ntBASIC0.94□□□□□ -2.26
GFRA3O60609 RNU6-695P-201ENST00000391157 104 ntBASIC0.94□□□□□ -2.26
GFRA3O60609 MIR1285-1-201ENST00000408593 84 ntBASIC0.94□□□□□ -2.26
GFRA3O60609 MIR4280-201ENST00000582178 76 ntBASIC0.94□□□□□ -2.26
GFRA3O60609 SNORD44.1-201ENST00000363202 61 ntBASIC0.93□□□□□ -2.26
GFRA3O60609 RNU6-563P-201ENST00000364872 108 ntBASIC0.93□□□□□ -2.26
GFRA3O60609 Y_RNA.603-201ENST00000410571 108 ntBASIC0.93□□□□□ -2.26
GFRA3O60609 RNA5SP285-201ENST00000516619 119 ntBASIC0.93□□□□□ -2.26
GFRA3O60609 MIR6514-201ENST00000622549 70 ntBASIC0.93□□□□□ -2.26
GFRA3O60609 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.92□□□□□ -2.26
GFRA3O60609 RNU6-901P-201ENST00000384593 106 ntBASIC0.92□□□□□ -2.26
GFRA3O60609 MIR608-201ENST00000384820 100 ntBASIC0.92□□□□□ -2.26
GFRA3O60609 RNU6-127P-201ENST00000390897 107 ntBASIC0.92□□□□□ -2.26
GFRA3O60609 RNA5SP193-201ENST00000410353 107 ntBASIC0.92□□□□□ -2.26
GFRA3O60609 RNU6-863P-201ENST00000515989 104 ntBASIC0.92□□□□□ -2.26
GFRA3O60609 MIR4711-201ENST00000578274 70 ntBASIC0.92□□□□□ -2.26
GFRA3O60609 MIR2909-201ENST00000617113 69 ntBASIC0.91□□□□□ -2.26
GFRA3O60609 RNU6-912P-201ENST00000363800 104 ntBASIC0.9□□□□□ -2.27
GFRA3O60609 SNORD18.2-201ENST00000459604 70 ntBASIC0.9□□□□□ -2.27
GFRA3O60609 CR383656.4-201ENST00000546909 122 ntBASIC0.9□□□□□ -2.27
GFRA3O60609 RNU6-180P-201ENST00000516697 61 ntBASIC0.89□□□□□ -2.27
GFRA3O60609 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.89□□□□□ -2.27
GFRA3O60609 AC120024.2-201ENST00000576526 175 ntBASIC0.89□□□□□ -2.27
GFRA3O60609 MIR23C-201ENST00000579846 100 ntBASIC0.89□□□□□ -2.27
GFRA3O60609 MIR4661-201ENST00000582720 75 ntBASIC0.89□□□□□ -2.27
GFRA3O60609 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.88□□□□□ -2.27
GFRA3O60609 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
GFRA3O60609 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.87□□□□□ -2.27
GFRA3O60609 MIR548H2-201ENST00000408874 88 ntBASIC0.87□□□□□ -2.27
GFRA3O60609 SNORD18C-201ENST00000362704 69 ntBASIC0.86□□□□□ -2.27
GFRA3O60609 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
GFRA3O60609 MIR6835-201ENST00000621552 64 ntBASIC0.85□□□□□ -2.27
GFRA3O60609 MIR655-201ENST00000362159 97 ntBASIC0.84□□□□□ -2.27
GFRA3O60609 MIR148A-201ENST00000362215 68 ntBASIC0.84□□□□□ -2.27
GFRA3O60609 RNA5SP347-201ENST00000362445 119 ntBASIC0.84□□□□□ -2.27
GFRA3O60609 MIR507-201ENST00000385234 94 ntBASIC0.84□□□□□ -2.27
GFRA3O60609 AC244250.2-201ENST00000418731 148 ntBASIC0.84□□□□□ -2.27
GFRA3O60609 AC090616.4-201ENST00000448026 115 ntBASIC0.84□□□□□ -2.27
GFRA3O60609 AC103810.9-201ENST00000606688 112 ntBASIC0.84□□□□□ -2.27
GFRA3O60609 SNORD74.6-201ENST00000364796 70 ntBASIC0.83□□□□□ -2.28
GFRA3O60609 RNU6-110P-201ENST00000384508 104 ntBASIC0.83□□□□□ -2.28
GFRA3O60609 RNA5SP163-201ENST00000410304 99 ntBASIC0.83□□□□□ -2.28
GFRA3O60609 AL445193.1-201ENST00000441183 141 ntBASIC0.83□□□□□ -2.28
GFRA3O60609 SNORD38.3-201ENST00000516599 73 ntBASIC0.83□□□□□ -2.28
GFRA3O60609 MIR6851-201ENST00000617060 67 ntBASIC0.81□□□□□ -2.28
GFRA3O60609 MIR103A1-201ENST00000362165 78 ntBASIC0.8□□□□□ -2.28
GFRA3O60609 MIR656-201ENST00000385224 78 ntBASIC0.8□□□□□ -2.28
GFRA3O60609 MIR892B-201ENST00000401279 77 ntBASIC0.8□□□□□ -2.28
GFRA3O60609 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
GFRA3O60609 RNU6-815P-201ENST00000384080 113 ntBASIC0.79□□□□□ -2.28
GFRA3O60609 MIR4636-201ENST00000582271 80 ntBASIC0.79□□□□□ -2.28
GFRA3O60609 SNORD114-17-201ENST00000364699 75 ntBASIC0.78□□□□□ -2.28
GFRA3O60609 Y_RNA.781-201ENST00000620301 103 ntBASIC0.78□□□□□ -2.28
GFRA3O60609 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
GFRA3O60609 SNORA62.5-201ENST00000516634 120 ntBASIC0.77□□□□□ -2.29
GFRA3O60609 snoU13.19-201ENST00000459148 104 ntBASIC0.76□□□□□ -2.29
GFRA3O60609 SNORD22.1-201ENST00000516331 125 ntBASIC0.75□□□□□ -2.29
GFRA3O60609 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms