Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 SNORD126-201ENST00000459475 77 ntBASIC-0.28□□□□□ -2.45
PRKNO60260 SNORD95.1-201ENST00000364099 68 ntBASIC-0.29□□□□□ -2.46
PRKNO60260 SNORD114-15-201ENST00000364687 72 ntBASIC-0.29□□□□□ -2.46
PRKNO60260 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.29□□□□□ -2.46
PRKNO60260 MIR518B-201ENST00000385127 83 ntBASIC-0.29□□□□□ -2.46
PRKNO60260 MIR204-201ENST00000385200 110 ntBASIC-0.29□□□□□ -2.46
PRKNO60260 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
PRKNO60260 SNORA13-201ENST00000458790 133 ntBASIC-0.29□□□□□ -2.46
PRKNO60260 SNORD22.1-201ENST00000516331 125 ntBASIC-0.29□□□□□ -2.46
PRKNO60260 SNORD74.6-201ENST00000364796 70 ntBASIC-0.3□□□□□ -2.46
PRKNO60260 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.3□□□□□ -2.46
PRKNO60260 RNU6-458P-201ENST00000384179 107 ntBASIC-0.3□□□□□ -2.46
PRKNO60260 SCARNA17-201ENST00000516183 144 ntBASIC-0.3□□□□□ -2.46
PRKNO60260 MIR4511-201ENST00000582784 87 ntBASIC-0.3□□□□□ -2.46
PRKNO60260 RNU6-92P-201ENST00000605893 104 ntBASIC-0.3□□□□□ -2.46
PRKNO60260 U6.58-201ENST00000613107 107 ntBASIC-0.3□□□□□ -2.46
PRKNO60260 RNU6-924P-201ENST00000362926 108 ntBASIC-0.31□□□□□ -2.46
PRKNO60260 SNORD116-16-201ENST00000384533 92 ntBASIC-0.31□□□□□ -2.46
PRKNO60260 SNORA41B-201ENST00000384785 128 ntBASIC-0.31□□□□□ -2.46
PRKNO60260 MIR4436A-201ENST00000585278 85 ntBASIC-0.31□□□□□ -2.46
PRKNO60260 AC103706.3-201ENST00000636297 85 ntBASIC-0.31□□□□□ -2.46
PRKNO60260 MIR429-201ENST00000362106 83 ntBASIC-0.32□□□□□ -2.46
PRKNO60260 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.32□□□□□ -2.46
PRKNO60260 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.32□□□□□ -2.46
PRKNO60260 RNU6-284P-201ENST00000411105 106 ntBASIC-0.32□□□□□ -2.46
PRKNO60260 MIR3179-1-201ENST00000578940 84 ntBASIC-0.32□□□□□ -2.46
PRKNO60260 MIR3179-2-201ENST00000579107 84 ntBASIC-0.32□□□□□ -2.46
PRKNO60260 MIR3179-3-201ENST00000579566 84 ntBASIC-0.32□□□□□ -2.46
PRKNO60260 MIR3179-4-201ENST00000617599 84 ntBASIC-0.32□□□□□ -2.46
PRKNO60260 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.33□□□□□ -2.46
PRKNO60260 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.33□□□□□ -2.46
PRKNO60260 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.33□□□□□ -2.46
PRKNO60260 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.33□□□□□ -2.46
PRKNO60260 SNORD57-201ENST00000448188 72 ntBASIC-0.33□□□□□ -2.46
PRKNO60260 AL627230.5-201ENST00000619807 58 ntBASIC-0.33□□□□□ -2.46
PRKNO60260 SNORD18.2-201ENST00000459604 70 ntBASIC-0.34□□□□□ -2.46
PRKNO60260 U7.5-201ENST00000517224 61 ntBASIC-0.34□□□□□ -2.46
PRKNO60260 SNORD60.1-201ENST00000362451 73 ntBASIC-0.35□□□□□ -2.47
PRKNO60260 SNORA25.5-201ENST00000363782 126 ntBASIC-0.35□□□□□ -2.47
PRKNO60260 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.35□□□□□ -2.47
PRKNO60260 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.35□□□□□ -2.47
PRKNO60260 RNU6-721P-201ENST00000410155 105 ntBASIC-0.35□□□□□ -2.47
PRKNO60260 AP000533.3-201ENST00000447704 118 ntBASIC-0.35□□□□□ -2.47
PRKNO60260 RNU7-88P-201ENST00000458752 63 ntBASIC-0.35□□□□□ -2.47
PRKNO60260 AC021146.6-201ENST00000514659 117 ntBASIC-0.35□□□□□ -2.47
PRKNO60260 RNA5SP192-201ENST00000364404 120 ntBASIC-0.36□□□□□ -2.47
PRKNO60260 RNU6-471P-201ENST00000383944 106 ntBASIC-0.36□□□□□ -2.47
PRKNO60260 SNORD114-14-201ENST00000362723 75 ntBASIC-0.37□□□□□ -2.47
PRKNO60260 SNORA3B-201ENST00000391305 131 ntBASIC-0.37□□□□□ -2.47
PRKNO60260 RNA5SP266-201ENST00000410273 108 ntBASIC-0.37□□□□□ -2.47
PRKNO60260 RNU6-122P-201ENST00000516818 107 ntBASIC-0.37□□□□□ -2.47
PRKNO60260 MIR548AX-201ENST00000580117 73 ntBASIC-0.37□□□□□ -2.47
PRKNO60260 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.38□□□□□ -2.47
PRKNO60260 SNORD1B-201ENST00000363091 84 ntBASIC-0.38□□□□□ -2.47
PRKNO60260 RNU6-696P-201ENST00000390834 107 ntBASIC-0.38□□□□□ -2.47
PRKNO60260 RNU6-732P-201ENST00000516033 103 ntBASIC-0.38□□□□□ -2.47
PRKNO60260 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.38□□□□□ -2.47
PRKNO60260 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.38□□□□□ -2.47
PRKNO60260 MIR4320-201ENST00000636981 65 ntBASIC-0.38□□□□□ -2.47
PRKNO60260 MIR409-201ENST00000362237 79 ntBASIC-0.39□□□□□ -2.47
PRKNO60260 RNU6-598P-201ENST00000364017 105 ntBASIC-0.39□□□□□ -2.47
PRKNO60260 RNU6-590P-201ENST00000365039 107 ntBASIC-0.39□□□□□ -2.47
PRKNO60260 MT-TQ-201ENST00000387372 72 ntBASIC-0.39□□□□□ -2.47
PRKNO60260 RNY1P9-201ENST00000532431 109 ntBASIC-0.39□□□□□ -2.47
PRKNO60260 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.4□□□□□ -2.47
PRKNO60260 AC110620.1-201ENST00000416042 228 ntBASIC-0.4□□□□□ -2.47
PRKNO60260 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.4□□□□□ -2.47
PRKNO60260 MIR4324-201ENST00000584846 72 ntBASIC-0.4□□□□□ -2.47
PRKNO60260 SNORD114-17-201ENST00000364699 75 ntBASIC-0.41□□□□□ -2.48
PRKNO60260 RNU6-669P-201ENST00000365575 107 ntBASIC-0.41□□□□□ -2.48
PRKNO60260 MIR587-201ENST00000384845 96 ntBASIC-0.41□□□□□ -2.48
PRKNO60260 AC139453.2-201ENST00000487255 133 ntBASIC-0.41□□□□□ -2.48
PRKNO60260 U2.18-201ENST00000622185 84 ntBASIC-0.41□□□□□ -2.48
PRKNO60260 RNU6-940P-201ENST00000363433 104 ntBASIC-0.42□□□□□ -2.48
PRKNO60260 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.42□□□□□ -2.48
PRKNO60260 SNORA26.4-201ENST00000391188 123 ntBASIC-0.42□□□□□ -2.48
PRKNO60260 MIR6738-201ENST00000619620 64 ntBASIC-0.42□□□□□ -2.48
PRKNO60260 RNU6-10P-201ENST00000384036 107 ntBASIC-0.43□□□□□ -2.48
PRKNO60260 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
PRKNO60260 SNORD63.1-201ENST00000516178 80 ntBASIC-0.43□□□□□ -2.48
PRKNO60260 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.44□□□□□ -2.48
PRKNO60260 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
PRKNO60260 RNU6-172P-201ENST00000411000 93 ntBASIC-0.44□□□□□ -2.48
PRKNO60260 MIR3115-201ENST00000577915 68 ntBASIC-0.44□□□□□ -2.48
PRKNO60260 SNORD115-33-201ENST00000363723 82 ntBASIC-0.45□□□□□ -2.48
PRKNO60260 RNA5SP331-201ENST00000364986 107 ntBASIC-0.45□□□□□ -2.48
PRKNO60260 AL500527.2-201ENST00000454105 95 ntBASIC-0.45□□□□□ -2.48
PRKNO60260 RNA5SP461-201ENST00000516451 104 ntBASIC-0.45□□□□□ -2.48
PRKNO60260 RNU6-231P-201ENST00000517122 103 ntBASIC-0.45□□□□□ -2.48
PRKNO60260 SNORD19-201ENST00000391191 68 ntBASIC-0.46□□□□□ -2.48
PRKNO60260 AL353691.2-201ENST00000443795 59 ntBASIC-0.46□□□□□ -2.48
PRKNO60260 AC125388.1-201ENST00000459631 156 ntBASIC-0.46□□□□□ -2.48
PRKNO60260 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.46□□□□□ -2.48
PRKNO60260 MIR466-201ENST00000580653 84 ntBASIC-0.46□□□□□ -2.48
PRKNO60260 U4.2-201ENST00000618561 85 ntBASIC-0.46□□□□□ -2.48
PRKNO60260 MIR196A1-201ENST00000388006 70 ntBASIC-0.47□□□□□ -2.48
PRKNO60260 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.47□□□□□ -2.48
PRKNO60260 MIR548AA1-201ENST00000384971 97 ntBASIC-0.48□□□□□ -2.49
PRKNO60260 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.48□□□□□ -2.49
PRKNO60260 MIR1468-201ENST00000410600 86 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms