Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.81□□□□□ -2.86
LSM1O15116 MTND4LP1-201ENST00000446263 157 ntBASIC-2.81□□□□□ -2.86
LSM1O15116 MIR630-201ENST00000384957 97 ntBASIC-2.82□□□□□ -2.86
LSM1O15116 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.82□□□□□ -2.86
LSM1O15116 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.82□□□□□ -2.86
LSM1O15116 RNU6-267P-201ENST00000516714 103 ntBASIC-2.82□□□□□ -2.86
LSM1O15116 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.82□□□□□ -2.86
LSM1O15116 RNU6-980P-201ENST00000516925 103 ntBASIC-2.82□□□□□ -2.86
LSM1O15116 AC120024.2-201ENST00000576526 175 ntBASIC-2.82□□□□□ -2.86
LSM1O15116 MIR1297-201ENST00000637311 77 ntBASIC-2.82□□□□□ -2.86
LSM1O15116 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.83□□□□□ -2.86
LSM1O15116 RNU6-129P-201ENST00000391022 107 ntBASIC-2.83□□□□□ -2.86
LSM1O15116 RNU6-402P-201ENST00000410678 103 ntBASIC-2.83□□□□□ -2.86
LSM1O15116 RNU6-834P-201ENST00000362367 110 ntBASIC-2.84□□□□□ -2.86
LSM1O15116 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.84□□□□□ -2.86
LSM1O15116 MIR496-201ENST00000385226 102 ntBASIC-2.84□□□□□ -2.86
LSM1O15116 RNU6-794P-201ENST00000517261 64 ntBASIC-2.85□□□□□ -2.87
LSM1O15116 MIR3133-201ENST00000583157 78 ntBASIC-2.85□□□□□ -2.87
LSM1O15116 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.85□□□□□ -2.87
LSM1O15116 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.86□□□□□ -2.87
LSM1O15116 RNU6-563P-201ENST00000364872 108 ntBASIC-2.86□□□□□ -2.87
LSM1O15116 MALAT1.1-201ENST00000618249 95 ntBASIC-2.86□□□□□ -2.87
LSM1O15116 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.87□□□□□ -2.87
LSM1O15116 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.87□□□□□ -2.87
LSM1O15116 MIR8053-201ENST00000613344 75 ntBASIC-2.87□□□□□ -2.87
LSM1O15116 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.87□□□□□ -2.87
LSM1O15116 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.88□□□□□ -2.87
LSM1O15116 RNU6-258P-201ENST00000390884 101 ntBASIC-2.88□□□□□ -2.87
LSM1O15116 AL365222.1-201ENST00000614661 98 ntBASIC-2.88□□□□□ -2.87
LSM1O15116 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.88□□□□□ -2.87
LSM1O15116 SNORD113.1-201ENST00000363280 73 ntBASIC-2.89□□□□□ -2.87
LSM1O15116 RNU6-668P-201ENST00000364180 107 ntBASIC-2.89□□□□□ -2.87
LSM1O15116 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.89□□□□□ -2.87
LSM1O15116 SNORA41B-201ENST00000384785 128 ntBASIC-2.89□□□□□ -2.87
LSM1O15116 AP001318.4-201ENST00000616637 121 ntBASIC-2.89□□□□□ -2.87
LSM1O15116 SNORD1B-201ENST00000363091 84 ntBASIC-2.9□□□□□ -2.87
LSM1O15116 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.9□□□□□ -2.87
LSM1O15116 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.9□□□□□ -2.87
LSM1O15116 MIR3139-201ENST00000579145 76 ntBASIC-2.9□□□□□ -2.87
LSM1O15116 MIR3123-201ENST00000583417 75 ntBASIC-2.9□□□□□ -2.87
LSM1O15116 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.9□□□□□ -2.87
LSM1O15116 RNA5SP405-201ENST00000363059 114 ntBASIC-2.91□□□□□ -2.88
LSM1O15116 RNU6-81P-201ENST00000365608 104 ntBASIC-2.91□□□□□ -2.88
LSM1O15116 RNU6-841P-201ENST00000383872 107 ntBASIC-2.91□□□□□ -2.88
LSM1O15116 AL031737.1-201ENST00000450125 223 ntBASIC-2.91□□□□□ -2.88
LSM1O15116 MIR4484-201ENST00000582855 83 ntBASIC-2.91□□□□□ -2.88
LSM1O15116 RNA5SP173-201ENST00000364857 136 ntBASIC-2.92□□□□□ -2.88
LSM1O15116 RNU6-675P-201ENST00000384236 104 ntBASIC-2.92□□□□□ -2.88
LSM1O15116 AC090425.1-201ENST00000610007 140 ntBASIC-2.92□□□□□ -2.88
LSM1O15116 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.92□□□□□ -2.88
LSM1O15116 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.93□□□□□ -2.88
LSM1O15116 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.93□□□□□ -2.88
LSM1O15116 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.93□□□□□ -2.88
LSM1O15116 SNORA40.13-201ENST00000516379 120 ntBASIC-2.93□□□□□ -2.88
LSM1O15116 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.93□□□□□ -2.88
LSM1O15116 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.93□□□□□ -2.88
LSM1O15116 MIR450A1-201ENST00000362262 91 ntBASIC-2.95□□□□□ -2.88
LSM1O15116 RNU6-247P-201ENST00000362636 107 ntBASIC-2.96□□□□□ -2.88
LSM1O15116 AC006160.2-201ENST00000637708 154 ntBASIC-2.96□□□□□ -2.88
LSM1O15116 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.97□□□□□ -2.88
LSM1O15116 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.97□□□□□ -2.88
LSM1O15116 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.97□□□□□ -2.88
LSM1O15116 SNORA63.4-201ENST00000362763 126 ntBASIC-2.98□□□□□ -2.89
LSM1O15116 SNORD45A-201ENST00000384512 84 ntBASIC-2.98□□□□□ -2.89
LSM1O15116 RNY4P18-201ENST00000391107 89 ntBASIC-2.98□□□□□ -2.89
LSM1O15116 RNU6-380P-201ENST00000410207 107 ntBASIC-2.98□□□□□ -2.89
LSM1O15116 MIR548AM-201ENST00000584298 74 ntBASIC-2.99□□□□□ -2.89
LSM1O15116 SNORA27.2-201ENST00000363365 126 ntBASIC-3□□□□□ -2.89
LSM1O15116 RNU6-755P-201ENST00000364400 103 ntBASIC-3□□□□□ -2.89
LSM1O15116 RNU6-1168P-201ENST00000390831 104 ntBASIC-3□□□□□ -2.89
LSM1O15116 RNU7-151P-201ENST00000516930 53 ntBASIC-3□□□□□ -2.89
LSM1O15116 MT-TM-201ENST00000387377 68 ntBASIC-3.01□□□□□ -2.89
LSM1O15116 RNU6-995P-201ENST00000391244 107 ntBASIC-3.01□□□□□ -2.89
LSM1O15116 RNU6-315P-201ENST00000362666 107 ntBASIC-3.02□□□□□ -2.89
LSM1O15116 RNU6-194P-201ENST00000363862 105 ntBASIC-3.02□□□□□ -2.89
LSM1O15116 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.02□□□□□ -2.89
LSM1O15116 MIR488-201ENST00000365739 83 ntBASIC-3.03□□□□□ -2.89
LSM1O15116 RNU6-209P-201ENST00000384118 107 ntBASIC-3.03□□□□□ -2.89
LSM1O15116 MIR7978-201ENST00000636158 59 ntBASIC-3.03□□□□□ -2.89
LSM1O15116 MIR664A-201ENST00000626086 82 ntBASIC-3.04□□□□□ -2.9
LSM1O15116 RNU6-669P-201ENST00000365575 107 ntBASIC-3.05□□□□□ -2.9
LSM1O15116 MIR125B1-201ENST00000385236 88 ntBASIC-3.05□□□□□ -2.9
LSM1O15116 SNORD54-201ENST00000459159 67 ntBASIC-3.05□□□□□ -2.9
LSM1O15116 AC005520.4-201ENST00000604337 90 ntBASIC-3.05□□□□□ -2.9
LSM1O15116 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.06□□□□□ -2.9
LSM1O15116 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.06□□□□□ -2.9
LSM1O15116 AC013734.1-201ENST00000619329 111 ntBASIC-3.06□□□□□ -2.9
LSM1O15116 SNORD63.2-201ENST00000516303 64 ntBASIC-3.07□□□□□ -2.9
LSM1O15116 RNU6-844P-201ENST00000517175 102 ntBASIC-3.07□□□□□ -2.9
LSM1O15116 RNU6-22P-201ENST00000384355 107 ntBASIC-3.08□□□□□ -2.9
LSM1O15116 RNU6-172P-201ENST00000411000 93 ntBASIC-3.09□□□□□ -2.9
LSM1O15116 RNU6-640P-201ENST00000363693 105 ntBASIC-3.1□□□□□ -2.91
LSM1O15116 RNU4-88P-201ENST00000411220 86 ntBASIC-3.1□□□□□ -2.91
LSM1O15116 RNU6-523P-201ENST00000516304 54 ntBASIC-3.1□□□□□ -2.91
LSM1O15116 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.1□□□□□ -2.91
LSM1O15116 SNORD116-24-201ENST00000384549 92 ntBASIC-3.11□□□□□ -2.91
LSM1O15116 MIR579-201ENST00000385221 98 ntBASIC-3.11□□□□□ -2.91
LSM1O15116 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.11□□□□□ -2.91
LSM1O15116 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.12□□□□□ -2.91
LSM1O15116 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.14□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms