Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RNU6-557P-201ENST00000516842 110 ntBASIC-2.17□□□□□ -2.76
UPK1AO00322 MIR548V-201ENST00000584165 80 ntBASIC-2.17□□□□□ -2.76
UPK1AO00322 RNU6-598P-201ENST00000364017 105 ntBASIC-2.18□□□□□ -2.76
UPK1AO00322 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.18□□□□□ -2.76
UPK1AO00322 SNORD116-22-201ENST00000384430 92 ntBASIC-2.18□□□□□ -2.76
UPK1AO00322 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.18□□□□□ -2.76
UPK1AO00322 RNU6-686P-201ENST00000364839 107 ntBASIC-2.19□□□□□ -2.76
UPK1AO00322 RNA5SP93-201ENST00000362525 114 ntBASIC-2.2□□□□□ -2.76
UPK1AO00322 AC008267.6-201ENST00000441664 139 ntBASIC-2.2□□□□□ -2.76
UPK1AO00322 MIR4719-201ENST00000585233 84 ntBASIC-2.2□□□□□ -2.76
UPK1AO00322 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.21□□□□□ -2.76
UPK1AO00322 U4.4-201ENST00000620626 117 ntBASIC-2.21□□□□□ -2.76
UPK1AO00322 U2.18-201ENST00000622185 84 ntBASIC-2.21□□□□□ -2.76
UPK1AO00322 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.22□□□□□ -2.76
UPK1AO00322 MIR520D-201ENST00000385002 87 ntBASIC-2.22□□□□□ -2.76
UPK1AO00322 RNU6-563P-201ENST00000364872 108 ntBASIC-2.23□□□□□ -2.77
UPK1AO00322 RNU6-258P-201ENST00000390884 101 ntBASIC-2.23□□□□□ -2.77
UPK1AO00322 RNU6-380P-201ENST00000410207 107 ntBASIC-2.23□□□□□ -2.77
UPK1AO00322 AC074348.1-201ENST00000426503 132 ntBASIC-2.23□□□□□ -2.77
UPK1AO00322 RNU6-247P-201ENST00000362636 107 ntBASIC-2.24□□□□□ -2.77
UPK1AO00322 RNU6-668P-201ENST00000364180 107 ntBASIC-2.24□□□□□ -2.77
UPK1AO00322 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.24□□□□□ -2.77
UPK1AO00322 MIR630-201ENST00000384957 97 ntBASIC-2.24□□□□□ -2.77
UPK1AO00322 MIR548AA1-201ENST00000384971 97 ntBASIC-2.24□□□□□ -2.77
UPK1AO00322 SNORD113-2-201ENST00000391082 72 ntBASIC-2.24□□□□□ -2.77
UPK1AO00322 AC099654.10-201ENST00000640395 161 ntBASIC-2.24□□□□□ -2.77
UPK1AO00322 RNA5SP215-201ENST00000363440 122 ntBASIC-2.25□□□□□ -2.77
UPK1AO00322 RNA5SP173-201ENST00000364857 136 ntBASIC-2.25□□□□□ -2.77
UPK1AO00322 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.26□□□□□ -2.77
UPK1AO00322 AC120024.2-201ENST00000576526 175 ntBASIC-2.26□□□□□ -2.77
UPK1AO00322 AC090425.1-201ENST00000610007 140 ntBASIC-2.26□□□□□ -2.77
UPK1AO00322 MIR548BB-201ENST00000626714 66 ntBASIC-2.26□□□□□ -2.77
UPK1AO00322 MIR1297-201ENST00000637311 77 ntBASIC-2.26□□□□□ -2.77
UPK1AO00322 SNORD115-31-201ENST00000365318 82 ntBASIC-2.27□□□□□ -2.77
UPK1AO00322 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.27□□□□□ -2.77
UPK1AO00322 RNU6-129P-201ENST00000391022 107 ntBASIC-2.27□□□□□ -2.77
UPK1AO00322 MIR466-201ENST00000580653 84 ntBASIC-2.27□□□□□ -2.77
UPK1AO00322 MIR3170-201ENST00000582699 77 ntBASIC-2.27□□□□□ -2.77
UPK1AO00322 MIR8053-201ENST00000613344 75 ntBASIC-2.27□□□□□ -2.77
UPK1AO00322 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.28□□□□□ -2.77
UPK1AO00322 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.28□□□□□ -2.77
UPK1AO00322 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.28□□□□□ -2.77
UPK1AO00322 RNU6-959P-201ENST00000384671 107 ntBASIC-2.28□□□□□ -2.77
UPK1AO00322 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.28□□□□□ -2.77
UPK1AO00322 RNU6-402P-201ENST00000410678 103 ntBASIC-2.28□□□□□ -2.77
UPK1AO00322 AL031737.1-201ENST00000450125 223 ntBASIC-2.28□□□□□ -2.77
UPK1AO00322 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.28□□□□□ -2.77
UPK1AO00322 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.29□□□□□ -2.78
UPK1AO00322 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.29□□□□□ -2.78
UPK1AO00322 RNU6-589P-201ENST00000516485 107 ntBASIC-2.29□□□□□ -2.78
UPK1AO00322 MIR4748-201ENST00000578076 82 ntBASIC-2.29□□□□□ -2.78
UPK1AO00322 MIR4484-201ENST00000582855 83 ntBASIC-2.29□□□□□ -2.78
UPK1AO00322 RNU6-219P-201ENST00000364728 107 ntBASIC-2.3□□□□□ -2.78
UPK1AO00322 SNORD116-16-201ENST00000384533 92 ntBASIC-2.3□□□□□ -2.78
UPK1AO00322 RNU6-995P-201ENST00000391244 107 ntBASIC-2.3□□□□□ -2.78
UPK1AO00322 MIR3133-201ENST00000583157 78 ntBASIC-2.3□□□□□ -2.78
UPK1AO00322 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.31□□□□□ -2.78
UPK1AO00322 RNU6-267P-201ENST00000516714 103 ntBASIC-2.31□□□□□ -2.78
UPK1AO00322 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.32□□□□□ -2.78
UPK1AO00322 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.32□□□□□ -2.78
UPK1AO00322 SNORA40.13-201ENST00000516379 120 ntBASIC-2.32□□□□□ -2.78
UPK1AO00322 MIR548W-201ENST00000581970 74 ntBASIC-2.32□□□□□ -2.78
UPK1AO00322 MALAT1.1-201ENST00000618249 95 ntBASIC-2.32□□□□□ -2.78
UPK1AO00322 RNU6-834P-201ENST00000362367 110 ntBASIC-2.33□□□□□ -2.78
UPK1AO00322 snoU13.10-201ENST00000459301 103 ntBASIC-2.33□□□□□ -2.78
UPK1AO00322 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.33□□□□□ -2.78
UPK1AO00322 SNORD113.1-201ENST00000363280 73 ntBASIC-2.34□□□□□ -2.78
UPK1AO00322 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.34□□□□□ -2.78
UPK1AO00322 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.34□□□□□ -2.78
UPK1AO00322 MIR450A1-201ENST00000362262 91 ntBASIC-2.35□□□□□ -2.79
UPK1AO00322 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.35□□□□□ -2.79
UPK1AO00322 RNY4P18-201ENST00000391107 89 ntBASIC-2.35□□□□□ -2.79
UPK1AO00322 AL365222.1-201ENST00000614661 98 ntBASIC-2.35□□□□□ -2.79
UPK1AO00322 RNU6-497P-201ENST00000365316 104 ntBASIC-2.36□□□□□ -2.79
UPK1AO00322 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.36□□□□□ -2.79
UPK1AO00322 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.36□□□□□ -2.79
UPK1AO00322 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.36□□□□□ -2.79
UPK1AO00322 RNU6-755P-201ENST00000364400 103 ntBASIC-2.37□□□□□ -2.79
UPK1AO00322 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.37□□□□□ -2.79
UPK1AO00322 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.37□□□□□ -2.79
UPK1AO00322 RNU6-794P-201ENST00000517261 64 ntBASIC-2.37□□□□□ -2.79
UPK1AO00322 AC006160.2-201ENST00000637708 154 ntBASIC-2.37□□□□□ -2.79
UPK1AO00322 RNU6-230P-201ENST00000362457 104 ntBASIC-2.38□□□□□ -2.79
UPK1AO00322 SNORA63.4-201ENST00000362763 126 ntBASIC-2.38□□□□□ -2.79
UPK1AO00322 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.38□□□□□ -2.79
UPK1AO00322 AP001318.4-201ENST00000616637 121 ntBASIC-2.38□□□□□ -2.79
UPK1AO00322 SNORD1B-201ENST00000363091 84 ntBASIC-2.39□□□□□ -2.79
UPK1AO00322 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.39□□□□□ -2.79
UPK1AO00322 SNORD45A-201ENST00000384512 84 ntBASIC-2.4□□□□□ -2.79
UPK1AO00322 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.4□□□□□ -2.79
UPK1AO00322 FTX_4.1-201ENST00000616291 147 ntBASIC-2.4□□□□□ -2.79
UPK1AO00322 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.4□□□□□ -2.79
UPK1AO00322 RNU6-209P-201ENST00000384118 107 ntBASIC-2.41□□□□□ -2.8
UPK1AO00322 SNORA41B-201ENST00000384785 128 ntBASIC-2.41□□□□□ -2.8
UPK1AO00322 SNORA27.2-201ENST00000363365 126 ntBASIC-2.42□□□□□ -2.8
UPK1AO00322 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.42□□□□□ -2.8
UPK1AO00322 RNU7-151P-201ENST00000516930 53 ntBASIC-2.42□□□□□ -2.8
UPK1AO00322 SNORD63.2-201ENST00000516303 64 ntBASIC-2.43□□□□□ -2.8
UPK1AO00322 RNY4P9-201ENST00000363194 97 ntBASIC-2.44□□□□□ -2.8
UPK1AO00322 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.44□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 240.9 ms