Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 MIR1297-201ENST00000637311 77 ntBASIC-1.71□□□□□ -2.68
CLRN2A0PK11 MIR520D-201ENST00000385002 87 ntBASIC-1.72□□□□□ -2.68
CLRN2A0PK11 SNORA40.13-201ENST00000516379 120 ntBASIC-1.72□□□□□ -2.68
CLRN2A0PK11 MIR23C-201ENST00000579846 100 ntBASIC-1.72□□□□□ -2.68
CLRN2A0PK11 RNA5SP215-201ENST00000363440 122 ntBASIC-1.73□□□□□ -2.69
CLRN2A0PK11 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.73□□□□□ -2.69
CLRN2A0PK11 MIR450A1-201ENST00000362262 91 ntBASIC-1.74□□□□□ -2.69
CLRN2A0PK11 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.74□□□□□ -2.69
CLRN2A0PK11 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.74□□□□□ -2.69
CLRN2A0PK11 RNU6-22P-201ENST00000384355 107 ntBASIC-1.74□□□□□ -2.69
CLRN2A0PK11 RNU6-675P-201ENST00000384236 104 ntBASIC-1.75□□□□□ -2.69
CLRN2A0PK11 MTND4LP1-201ENST00000446263 157 ntBASIC-1.75□□□□□ -2.69
CLRN2A0PK11 RNU6-983P-201ENST00000516004 103 ntBASIC-1.75□□□□□ -2.69
CLRN2A0PK11 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.77□□□□□ -2.69
CLRN2A0PK11 RNA5SP86-201ENST00000390869 98 ntBASIC-1.77□□□□□ -2.69
CLRN2A0PK11 SNORD113-2-201ENST00000391082 72 ntBASIC-1.77□□□□□ -2.69
CLRN2A0PK11 RNY4P18-201ENST00000391107 89 ntBASIC-1.77□□□□□ -2.69
CLRN2A0PK11 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.77□□□□□ -2.69
CLRN2A0PK11 MIR8053-201ENST00000613344 75 ntBASIC-1.77□□□□□ -2.69
CLRN2A0PK11 RNA5SP93-201ENST00000362525 114 ntBASIC-1.78□□□□□ -2.69
CLRN2A0PK11 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.78□□□□□ -2.69
CLRN2A0PK11 SNORD116-16-201ENST00000384533 92 ntBASIC-1.78□□□□□ -2.69
CLRN2A0PK11 MIR630-201ENST00000384957 97 ntBASIC-1.78□□□□□ -2.69
CLRN2A0PK11 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.78□□□□□ -2.69
CLRN2A0PK11 U2.18-201ENST00000622185 84 ntBASIC-1.78□□□□□ -2.69
CLRN2A0PK11 AC006160.2-201ENST00000637708 154 ntBASIC-1.78□□□□□ -2.69
CLRN2A0PK11 SNORD113.1-201ENST00000363280 73 ntBASIC-1.79□□□□□ -2.7
CLRN2A0PK11 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.79□□□□□ -2.7
CLRN2A0PK11 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
CLRN2A0PK11 MIR3170-201ENST00000582699 77 ntBASIC-1.79□□□□□ -2.7
CLRN2A0PK11 RNU6-668P-201ENST00000364180 107 ntBASIC-1.8□□□□□ -2.7
CLRN2A0PK11 MIR548AA1-201ENST00000384971 97 ntBASIC-1.8□□□□□ -2.7
CLRN2A0PK11 RNU6-755P-201ENST00000364400 103 ntBASIC-1.81□□□□□ -2.7
CLRN2A0PK11 RNU6-380P-201ENST00000410207 107 ntBASIC-1.81□□□□□ -2.7
CLRN2A0PK11 MIR4484-201ENST00000582855 83 ntBASIC-1.81□□□□□ -2.7
CLRN2A0PK11 MIR488-201ENST00000365739 83 ntBASIC-1.82□□□□□ -2.7
CLRN2A0PK11 MIR548H1-201ENST00000408610 102 ntBASIC-1.82□□□□□ -2.7
CLRN2A0PK11 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.82□□□□□ -2.7
CLRN2A0PK11 RNU6-118P-201ENST00000516552 102 ntBASIC-1.82□□□□□ -2.7
CLRN2A0PK11 RNU6-315P-201ENST00000362666 107 ntBASIC-1.83□□□□□ -2.7
CLRN2A0PK11 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.83□□□□□ -2.7
CLRN2A0PK11 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.83□□□□□ -2.7
CLRN2A0PK11 RNU6-640P-201ENST00000363693 105 ntBASIC-1.84□□□□□ -2.7
CLRN2A0PK11 SNORA41B-201ENST00000384785 128 ntBASIC-1.84□□□□□ -2.7
CLRN2A0PK11 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.84□□□□□ -2.7
CLRN2A0PK11 SNORA63.4-201ENST00000362763 126 ntBASIC-1.85□□□□□ -2.71
CLRN2A0PK11 RNA5SP173-201ENST00000364857 136 ntBASIC-1.85□□□□□ -2.71
CLRN2A0PK11 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.85□□□□□ -2.71
CLRN2A0PK11 RNU6-313P-201ENST00000516317 112 ntBASIC-1.85□□□□□ -2.71
CLRN2A0PK11 RNU6-844P-201ENST00000517175 102 ntBASIC-1.85□□□□□ -2.71
CLRN2A0PK11 RNU6-695P-201ENST00000391157 104 ntBASIC-1.86□□□□□ -2.71
CLRN2A0PK11 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.86□□□□□ -2.71
CLRN2A0PK11 RNY4-201ENST00000516507 96 ntBASIC-1.86□□□□□ -2.71
CLRN2A0PK11 MIR3671-201ENST00000580455 88 ntBASIC-1.86□□□□□ -2.71
CLRN2A0PK11 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.86□□□□□ -2.71
CLRN2A0PK11 SNORD45A-201ENST00000384512 84 ntBASIC-1.87□□□□□ -2.71
CLRN2A0PK11 SNORD54-201ENST00000459159 67 ntBASIC-1.87□□□□□ -2.71
CLRN2A0PK11 AC120024.2-201ENST00000576526 175 ntBASIC-1.87□□□□□ -2.71
CLRN2A0PK11 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.87□□□□□ -2.71
CLRN2A0PK11 SNORD1B-201ENST00000363091 84 ntBASIC-1.88□□□□□ -2.71
CLRN2A0PK11 MIR3668-201ENST00000582138 75 ntBASIC-1.88□□□□□ -2.71
CLRN2A0PK11 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.89□□□□□ -2.71
CLRN2A0PK11 RNU6-32P-201ENST00000383948 107 ntBASIC-1.89□□□□□ -2.71
CLRN2A0PK11 RNU6-13P-201ENST00000384248 107 ntBASIC-1.89□□□□□ -2.71
CLRN2A0PK11 RNU6-12P-201ENST00000384604 107 ntBASIC-1.89□□□□□ -2.71
CLRN2A0PK11 RNU6-41P-201ENST00000384741 107 ntBASIC-1.89□□□□□ -2.71
CLRN2A0PK11 RNU6-258P-201ENST00000390884 101 ntBASIC-1.89□□□□□ -2.71
CLRN2A0PK11 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.89□□□□□ -2.71
CLRN2A0PK11 MIR664A-201ENST00000626086 82 ntBASIC-1.89□□□□□ -2.71
CLRN2A0PK11 RNU6-563P-201ENST00000364872 108 ntBASIC-1.91□□□□□ -2.72
CLRN2A0PK11 MIR548M-201ENST00000408260 86 ntBASIC-1.91□□□□□ -2.72
CLRN2A0PK11 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.91□□□□□ -2.72
CLRN2A0PK11 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.92□□□□□ -2.72
CLRN2A0PK11 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.92□□□□□ -2.72
CLRN2A0PK11 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.92□□□□□ -2.72
CLRN2A0PK11 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.92□□□□□ -2.72
CLRN2A0PK11 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.92□□□□□ -2.72
CLRN2A0PK11 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.93□□□□□ -2.72
CLRN2A0PK11 SNORD113-1-201ENST00000365321 69 ntBASIC-1.93□□□□□ -2.72
CLRN2A0PK11 RNU7-151P-201ENST00000516930 53 ntBASIC-1.93□□□□□ -2.72
CLRN2A0PK11 RNU6-247P-201ENST00000362636 107 ntBASIC-1.94□□□□□ -2.72
CLRN2A0PK11 SNORA27.2-201ENST00000363365 126 ntBASIC-1.94□□□□□ -2.72
CLRN2A0PK11 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.94□□□□□ -2.72
CLRN2A0PK11 SNORD116-24-201ENST00000384549 92 ntBASIC-1.94□□□□□ -2.72
CLRN2A0PK11 RNU6-995P-201ENST00000391244 107 ntBASIC-1.94□□□□□ -2.72
CLRN2A0PK11 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.94□□□□□ -2.72
CLRN2A0PK11 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.95□□□□□ -2.72
CLRN2A0PK11 RNU6-979P-201ENST00000383896 107 ntBASIC-1.95□□□□□ -2.72
CLRN2A0PK11 RNU6-147P-201ENST00000383983 107 ntBASIC-1.95□□□□□ -2.72
CLRN2A0PK11 MIR5588-201ENST00000581890 63 ntBASIC-1.95□□□□□ -2.72
CLRN2A0PK11 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.96□□□□□ -2.72
CLRN2A0PK11 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.96□□□□□ -2.72
CLRN2A0PK11 RNU6-841P-201ENST00000383872 107 ntBASIC-1.96□□□□□ -2.72
CLRN2A0PK11 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.96□□□□□ -2.72
CLRN2A0PK11 MIR487B-201ENST00000385021 84 ntBASIC-1.96□□□□□ -2.72
CLRN2A0PK11 MT-TR-201ENST00000387439 65 ntBASIC-1.96□□□□□ -2.72
CLRN2A0PK11 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.96□□□□□ -2.72
CLRN2A0PK11 MIR3910-1-201ENST00000580936 111 ntBASIC-1.96□□□□□ -2.72
CLRN2A0PK11 MIR3123-201ENST00000583417 75 ntBASIC-1.96□□□□□ -2.72
CLRN2A0PK11 MIR7978-201ENST00000636158 59 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 268.3 ms