Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNY4-201ENST00000516507 96 ntBASIC-2.19□□□□□ -2.76
TRAV1-1A0A0B4J248 MIR4748-201ENST00000578076 82 ntBASIC-2.19□□□□□ -2.76
TRAV1-1A0A0B4J248 MIR4668-201ENST00000582284 70 ntBASIC-2.19□□□□□ -2.76
TRAV1-1A0A0B4J248 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.2□□□□□ -2.76
TRAV1-1A0A0B4J248 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.2□□□□□ -2.76
TRAV1-1A0A0B4J248 RNU6-200P-201ENST00000364743 107 ntBASIC-2.2□□□□□ -2.76
TRAV1-1A0A0B4J248 SNORD116-21-201ENST00000384507 92 ntBASIC-2.2□□□□□ -2.76
TRAV1-1A0A0B4J248 RNU6-738P-201ENST00000384531 106 ntBASIC-2.2□□□□□ -2.76
TRAV1-1A0A0B4J248 RNU6-659P-201ENST00000516454 104 ntBASIC-2.2□□□□□ -2.76
TRAV1-1A0A0B4J248 RNU6-557P-201ENST00000516842 110 ntBASIC-2.2□□□□□ -2.76
TRAV1-1A0A0B4J248 SNORD18C-201ENST00000362704 69 ntBASIC-2.21□□□□□ -2.76
TRAV1-1A0A0B4J248 SNORD113.1-201ENST00000363280 73 ntBASIC-2.21□□□□□ -2.76
TRAV1-1A0A0B4J248 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.21□□□□□ -2.76
TRAV1-1A0A0B4J248 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.21□□□□□ -2.76
TRAV1-1A0A0B4J248 SNORA19-201ENST00000384737 128 ntBASIC-2.21□□□□□ -2.76
TRAV1-1A0A0B4J248 FTX_4.1-201ENST00000616291 147 ntBASIC-2.21□□□□□ -2.76
TRAV1-1A0A0B4J248 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.22□□□□□ -2.76
TRAV1-1A0A0B4J248 RNU6-686P-201ENST00000364839 107 ntBASIC-2.22□□□□□ -2.76
TRAV1-1A0A0B4J248 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.22□□□□□ -2.76
TRAV1-1A0A0B4J248 SNORD45A-201ENST00000384512 84 ntBASIC-2.22□□□□□ -2.76
TRAV1-1A0A0B4J248 AC097484.2-201ENST00000509147 251 ntBASIC-2.22□□□□□ -2.76
TRAV1-1A0A0B4J248 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.22□□□□□ -2.76
TRAV1-1A0A0B4J248 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.23□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.23□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.23□□□□□ -2.77
TRAV1-1A0A0B4J248 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.23□□□□□ -2.77
TRAV1-1A0A0B4J248 MIR1302-5-201ENST00000408164 150 ntBASIC-2.23□□□□□ -2.77
TRAV1-1A0A0B4J248 RNU6-554P-201ENST00000410466 106 ntBASIC-2.23□□□□□ -2.77
TRAV1-1A0A0B4J248 MIR202-201ENST00000362219 110 ntBASIC-2.24□□□□□ -2.77
TRAV1-1A0A0B4J248 MIR4503-201ENST00000582187 83 ntBASIC-2.24□□□□□ -2.77
TRAV1-1A0A0B4J248 MIR664A-201ENST00000626086 82 ntBASIC-2.24□□□□□ -2.77
TRAV1-1A0A0B4J248 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.25□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.25□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.25□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.25□□□□□ -2.77
TRAV1-1A0A0B4J248 RNU6-267P-201ENST00000516714 103 ntBASIC-2.25□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.25□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.25□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.25□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.25□□□□□ -2.77
TRAV1-1A0A0B4J248 RNA5SP173-201ENST00000364857 136 ntBASIC-2.26□□□□□ -2.77
TRAV1-1A0A0B4J248 AP001318.4-201ENST00000616637 121 ntBASIC-2.26□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.26□□□□□ -2.77
TRAV1-1A0A0B4J248 RNU6-219P-201ENST00000364728 107 ntBASIC-2.27□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.27□□□□□ -2.77
TRAV1-1A0A0B4J248 RNU6-106P-201ENST00000384405 107 ntBASIC-2.27□□□□□ -2.77
TRAV1-1A0A0B4J248 RNU6-649P-201ENST00000384463 107 ntBASIC-2.27□□□□□ -2.77
TRAV1-1A0A0B4J248 RNU6-520P-201ENST00000384717 104 ntBASIC-2.27□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.27□□□□□ -2.77
TRAV1-1A0A0B4J248 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.28□□□□□ -2.77
TRAV1-1A0A0B4J248 RNU6-497P-201ENST00000365316 104 ntBASIC-2.28□□□□□ -2.77
TRAV1-1A0A0B4J248 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.28□□□□□ -2.77
TRAV1-1A0A0B4J248 MIR548BB-201ENST00000626714 66 ntBASIC-2.28□□□□□ -2.77
TRAV1-1A0A0B4J248 RNY1P1-201ENST00000364372 112 ntBASIC-2.29□□□□□ -2.78
TRAV1-1A0A0B4J248 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.29□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6-907P-201ENST00000390924 102 ntBASIC-2.29□□□□□ -2.78
TRAV1-1A0A0B4J248 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.29□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU7-200P-201ENST00000516105 62 ntBASIC-2.29□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6-346P-201ENST00000516288 111 ntBASIC-2.29□□□□□ -2.78
TRAV1-1A0A0B4J248 MIR8053-201ENST00000613344 75 ntBASIC-2.29□□□□□ -2.78
TRAV1-1A0A0B4J248 SNORD113-3-201ENST00000364830 72 ntBASIC-2.3□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.3□□□□□ -2.78
TRAV1-1A0A0B4J248 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.3□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6-129P-201ENST00000391022 107 ntBASIC-2.3□□□□□ -2.78
TRAV1-1A0A0B4J248 MIR548N-201ENST00000408742 75 ntBASIC-2.3□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6-402P-201ENST00000410678 103 ntBASIC-2.3□□□□□ -2.78
TRAV1-1A0A0B4J248 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.31□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6-379P-201ENST00000363813 104 ntBASIC-2.31□□□□□ -2.78
TRAV1-1A0A0B4J248 SNORD60-201ENST00000383903 83 ntBASIC-2.31□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.31□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6-388P-201ENST00000517012 105 ntBASIC-2.31□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6-389P-201ENST00000517048 105 ntBASIC-2.31□□□□□ -2.78
TRAV1-1A0A0B4J248 AL353621.2-201ENST00000605340 133 ntBASIC-2.31□□□□□ -2.78
TRAV1-1A0A0B4J248 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.32□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.32□□□□□ -2.78
TRAV1-1A0A0B4J248 SNORA63.4-201ENST00000362763 126 ntBASIC-2.33□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6-694P-201ENST00000364071 147 ntBASIC-2.33□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6-141P-201ENST00000410499 105 ntBASIC-2.33□□□□□ -2.78
TRAV1-1A0A0B4J248 RNY4P9-201ENST00000363194 97 ntBASIC-2.34□□□□□ -2.78
TRAV1-1A0A0B4J248 RNU6-886P-201ENST00000384319 105 ntBASIC-2.34□□□□□ -2.78
TRAV1-1A0A0B4J248 SNORD116-22-201ENST00000384430 92 ntBASIC-2.34□□□□□ -2.78
TRAV1-1A0A0B4J248 SNORD116-24-201ENST00000384549 92 ntBASIC-2.34□□□□□ -2.78
TRAV1-1A0A0B4J248 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.34□□□□□ -2.78
TRAV1-1A0A0B4J248 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.34□□□□□ -2.78
TRAV1-1A0A0B4J248 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.34□□□□□ -2.78
TRAV1-1A0A0B4J248 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.34□□□□□ -2.78
TRAV1-1A0A0B4J248 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.34□□□□□ -2.78
TRAV1-1A0A0B4J248 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.34□□□□□ -2.78
TRAV1-1A0A0B4J248 MIR1297-201ENST00000637311 77 ntBASIC-2.34□□□□□ -2.78
TRAV1-1A0A0B4J248 SNORA17.4-201ENST00000391287 132 ntBASIC-2.35□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.35□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU6-755P-201ENST00000364400 103 ntBASIC-2.36□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU6-196P-201ENST00000384315 107 ntBASIC-2.36□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU6-789P-201ENST00000517105 102 ntBASIC-2.36□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU6-912P-201ENST00000363800 104 ntBASIC-2.37□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU6-810P-201ENST00000364001 107 ntBASIC-2.37□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU6-828P-201ENST00000364876 107 ntBASIC-2.37□□□□□ -2.79
TRAV1-1A0A0B4J248 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.37□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU6-867P-201ENST00000364956 107 ntBASIC-2.37□□□□□ -2.79
TRAV1-1A0A0B4J248 RNU7-160P-201ENST00000516660 62 ntBASIC-2.37□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms