Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNU7-55P-201ENST00000459426 62 ntBASIC1.37□□□□□ -2.19
TRIM35Q9UPQ4 MIR4295-201ENST00000585286 85 ntBASIC1.37□□□□□ -2.19
TRIM35Q9UPQ4 SNORD114-27-201ENST00000363766 70 ntBASIC1.36□□□□□ -2.19
TRIM35Q9UPQ4 MIR548Q-201ENST00000408404 100 ntBASIC1.36□□□□□ -2.19
TRIM35Q9UPQ4 MIR1285-1-201ENST00000408593 84 ntBASIC1.36□□□□□ -2.19
TRIM35Q9UPQ4 SCARNA11.2-201ENST00000517183 154 ntBASIC1.36□□□□□ -2.19
TRIM35Q9UPQ4 MIR6504-201ENST00000613520 61 ntBASIC1.36□□□□□ -2.19
TRIM35Q9UPQ4 MIR520D-201ENST00000385002 87 ntBASIC1.35□□□□□ -2.19
TRIM35Q9UPQ4 RNU6-361P-201ENST00000364454 107 ntBASIC1.34□□□□□ -2.19
TRIM35Q9UPQ4 RNU6-42P-201ENST00000384165 107 ntBASIC1.34□□□□□ -2.19
TRIM35Q9UPQ4 AC087343.1-201ENST00000477341 475 ntBASIC1.34□□□□□ -2.19
TRIM35Q9UPQ4 MIR499B-201ENST00000636498 73 ntBASIC1.34□□□□□ -2.19
TRIM35Q9UPQ4 RNU4-38P-201ENST00000364472 129 ntBASIC1.33□□□□□ -2.2
TRIM35Q9UPQ4 AC096531.1-201ENST00000419107 107 ntBASIC1.33□□□□□ -2.2
TRIM35Q9UPQ4 RNA5SP480-201ENST00000516840 109 ntBASIC1.33□□□□□ -2.2
TRIM35Q9UPQ4 RNU1-93P-201ENST00000364704 169 ntBASIC1.32□□□□□ -2.2
TRIM35Q9UPQ4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.32□□□□□ -2.2
TRIM35Q9UPQ4 RNU6-300P-201ENST00000459080 104 ntBASIC1.31□□□□□ -2.2
TRIM35Q9UPQ4 RNY1P9-201ENST00000532431 109 ntBASIC1.31□□□□□ -2.2
TRIM35Q9UPQ4 MIR373-201ENST00000362273 69 ntBASIC1.3□□□□□ -2.2
TRIM35Q9UPQ4 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
TRIM35Q9UPQ4 RNU7-129P-201ENST00000516128 62 ntBASIC1.3□□□□□ -2.2
TRIM35Q9UPQ4 RNA5SP220-201ENST00000516298 104 ntBASIC1.3□□□□□ -2.2
TRIM35Q9UPQ4 AL590095.2-201ENST00000604136 117 ntBASIC1.3□□□□□ -2.2
TRIM35Q9UPQ4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TRIM35Q9UPQ4 RNA5SP169-201ENST00000517268 117 ntBASIC1.29□□□□□ -2.2
TRIM35Q9UPQ4 MIR4661-201ENST00000582720 75 ntBASIC1.29□□□□□ -2.2
TRIM35Q9UPQ4 MIR6734-201ENST00000621166 68 ntBASIC1.29□□□□□ -2.2
TRIM35Q9UPQ4 RNU6-900P-201ENST00000384498 102 ntBASIC1.28□□□□□ -2.2
TRIM35Q9UPQ4 SNORD19-201ENST00000391191 68 ntBASIC1.28□□□□□ -2.2
TRIM35Q9UPQ4 MIR4452-201ENST00000583004 71 ntBASIC1.28□□□□□ -2.2
TRIM35Q9UPQ4 MIR202-201ENST00000362219 110 ntBASIC1.26□□□□□ -2.21
TRIM35Q9UPQ4 AC108740.1-201ENST00000498629 225 ntBASIC1.26□□□□□ -2.21
TRIM35Q9UPQ4 MIR3973-201ENST00000579824 107 ntBASIC1.26□□□□□ -2.21
TRIM35Q9UPQ4 SNORD114-22-201ENST00000365423 72 ntBASIC1.25□□□□□ -2.21
TRIM35Q9UPQ4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
TRIM35Q9UPQ4 RNU6-1233P-201ENST00000362922 102 ntBASIC1.24□□□□□ -2.21
TRIM35Q9UPQ4 SNORA42.1-201ENST00000363515 137 ntBASIC1.24□□□□□ -2.21
TRIM35Q9UPQ4 MIR608-201ENST00000384820 100 ntBASIC1.24□□□□□ -2.21
TRIM35Q9UPQ4 RNU6-863P-201ENST00000515989 104 ntBASIC1.24□□□□□ -2.21
TRIM35Q9UPQ4 RNU6-176P-201ENST00000517196 105 ntBASIC1.24□□□□□ -2.21
TRIM35Q9UPQ4 SNORD114-26-201ENST00000363543 72 ntBASIC1.23□□□□□ -2.21
TRIM35Q9UPQ4 SNORA17.4-201ENST00000391287 132 ntBASIC1.23□□□□□ -2.21
TRIM35Q9UPQ4 MIR532-201ENST00000385025 91 ntBASIC1.22□□□□□ -2.21
TRIM35Q9UPQ4 MIR5704-201ENST00000584029 77 ntBASIC1.22□□□□□ -2.21
TRIM35Q9UPQ4 RNA5SP325-201ENST00000363756 130 ntBASIC1.21□□□□□ -2.22
TRIM35Q9UPQ4 AC103810.9-201ENST00000606688 112 ntBASIC1.21□□□□□ -2.22
TRIM35Q9UPQ4 MIR6779-201ENST00000617283 64 ntBASIC1.21□□□□□ -2.22
TRIM35Q9UPQ4 uc_338.17-201ENST00000619633 179 ntBASIC1.21□□□□□ -2.22
TRIM35Q9UPQ4 MIR124-2-201ENST00000385081 109 ntBASIC1.2□□□□□ -2.22
TRIM35Q9UPQ4 RNY3P8-201ENST00000411366 126 ntBASIC1.2□□□□□ -2.22
TRIM35Q9UPQ4 MIR6854-201ENST00000614935 69 ntBASIC1.2□□□□□ -2.22
TRIM35Q9UPQ4 MIR8068-201ENST00000618032 68 ntBASIC1.2□□□□□ -2.22
TRIM35Q9UPQ4 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
TRIM35Q9UPQ4 MIR520E-201ENST00000384867 87 ntBASIC1.19□□□□□ -2.22
TRIM35Q9UPQ4 RNU6-110P-201ENST00000384508 104 ntBASIC1.17□□□□□ -2.22
TRIM35Q9UPQ4 RNU6-455P-201ENST00000384681 107 ntBASIC1.17□□□□□ -2.22
TRIM35Q9UPQ4 MIR4698-201ENST00000577795 80 ntBASIC1.17□□□□□ -2.22
TRIM35Q9UPQ4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
TRIM35Q9UPQ4 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
TRIM35Q9UPQ4 MIR6515-201ENST00000619843 57 ntBASIC1.16□□□□□ -2.22
TRIM35Q9UPQ4 AC022709.1-201ENST00000615967 87 ntBASIC1.15□□□□□ -2.23
TRIM35Q9UPQ4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TRIM35Q9UPQ4 MIR6857-201ENST00000613267 93 ntBASIC1.13□□□□□ -2.23
TRIM35Q9UPQ4 MIR6514-201ENST00000622549 70 ntBASIC1.12□□□□□ -2.23
TRIM35Q9UPQ4 SNORD44.1-201ENST00000363202 61 ntBASIC1.11□□□□□ -2.23
TRIM35Q9UPQ4 RNU6-608P-201ENST00000383927 104 ntBASIC1.11□□□□□ -2.23
TRIM35Q9UPQ4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.11□□□□□ -2.23
TRIM35Q9UPQ4 RNU6ATAC22P-201ENST00000516794 89 ntBASIC1.11□□□□□ -2.23
TRIM35Q9UPQ4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.11□□□□□ -2.23
TRIM35Q9UPQ4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
TRIM35Q9UPQ4 MIR598-201ENST00000384868 97 ntBASIC1.1□□□□□ -2.23
TRIM35Q9UPQ4 RPS29P1-201ENST00000465274 159 ntBASIC1.1□□□□□ -2.23
TRIM35Q9UPQ4 AP002795.1-201ENST00000534879 84 ntBASIC1.1□□□□□ -2.23
TRIM35Q9UPQ4 MIR548J-201ENST00000408833 112 ntBASIC1.09□□□□□ -2.23
TRIM35Q9UPQ4 AC211469.2-201ENST00000605461 205 ntBASIC1.09□□□□□ -2.23
TRIM35Q9UPQ4 SNORD60-201ENST00000383903 83 ntBASIC1.08□□□□□ -2.24
TRIM35Q9UPQ4 CR383656.4-201ENST00000546909 122 ntBASIC1.08□□□□□ -2.24
TRIM35Q9UPQ4 MIR5683-201ENST00000636514 76 ntBASIC1.08□□□□□ -2.24
TRIM35Q9UPQ4 RNU6-127P-201ENST00000390897 107 ntBASIC1.07□□□□□ -2.24
TRIM35Q9UPQ4 RNU6-351P-201ENST00000516097 100 ntBASIC1.07□□□□□ -2.24
TRIM35Q9UPQ4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TRIM35Q9UPQ4 Y_RNA.374-201ENST00000365606 101 ntBASIC1.06□□□□□ -2.24
TRIM35Q9UPQ4 RNU6-901P-201ENST00000384593 106 ntBASIC1.06□□□□□ -2.24
TRIM35Q9UPQ4 AC114755.3-201ENST00000481111 251 ntBASIC1.06□□□□□ -2.24
TRIM35Q9UPQ4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.05□□□□□ -2.24
TRIM35Q9UPQ4 MIR151B-201ENST00000584249 96 ntBASIC1.05□□□□□ -2.24
TRIM35Q9UPQ4 MIR148A-201ENST00000362215 68 ntBASIC1.03□□□□□ -2.24
TRIM35Q9UPQ4 SNORD56B-201ENST00000384713 71 ntBASIC1.03□□□□□ -2.24
TRIM35Q9UPQ4 SNORD114-2-201ENST00000363953 78 ntBASIC1.02□□□□□ -2.25
TRIM35Q9UPQ4 AL353691.2-201ENST00000443795 59 ntBASIC1.02□□□□□ -2.25
TRIM35Q9UPQ4 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
TRIM35Q9UPQ4 SNORA26.4-201ENST00000391188 123 ntBASIC1.01□□□□□ -2.25
TRIM35Q9UPQ4 CYP3A137P-201ENST00000562436 69 ntBASIC1.01□□□□□ -2.25
TRIM35Q9UPQ4 MIR548N-201ENST00000408742 75 ntBASIC1□□□□□ -2.25
TRIM35Q9UPQ4 PSMC1P5-201ENST00000512850 177 ntBASIC1□□□□□ -2.25
TRIM35Q9UPQ4 Y_RNA.382-201ENST00000365672 114 ntBASIC0.98□□□□□ -2.25
TRIM35Q9UPQ4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
TRIM35Q9UPQ4 RNU6-180P-201ENST00000516697 61 ntBASIC0.98□□□□□ -2.25
TRIM35Q9UPQ4 MIR643-201ENST00000385267 97 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms