Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MIR7107-201ENST00000611489 80 ntBASIC0.53□□□□□ -2.33
NOTCH3Q9UM47 SNORD114-29-201ENST00000364819 70 ntBASIC0.52□□□□□ -2.33
NOTCH3Q9UM47 Y_RNA.514-201ENST00000384528 112 ntBASIC0.52□□□□□ -2.33
NOTCH3Q9UM47 MIR760-201ENST00000390220 80 ntBASIC0.52□□□□□ -2.33
NOTCH3Q9UM47 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.52□□□□□ -2.33
NOTCH3Q9UM47 AC244090.1-201ENST00000441884 93 ntBASIC0.52□□□□□ -2.33
NOTCH3Q9UM47 MIR548AL-201ENST00000578416 97 ntBASIC0.52□□□□□ -2.33
NOTCH3Q9UM47 SNORD115-25-201ENST00000362619 82 ntBASIC0.52□□□□□ -2.33
NOTCH3Q9UM47 MIR601-201ENST00000385256 79 ntBASIC0.52□□□□□ -2.33
NOTCH3Q9UM47 MIR548AG1-201ENST00000579932 66 ntBASIC0.52□□□□□ -2.33
NOTCH3Q9UM47 RNY1P8-201ENST00000383970 114 ntBASIC0.51□□□□□ -2.33
NOTCH3Q9UM47 RNU6-458P-201ENST00000384179 107 ntBASIC0.51□□□□□ -2.33
NOTCH3Q9UM47 RNA5SP222-201ENST00000411039 105 ntBASIC0.51□□□□□ -2.33
NOTCH3Q9UM47 RNA5SP268-201ENST00000516828 124 ntBASIC0.51□□□□□ -2.33
NOTCH3Q9UM47 MIR378F-201ENST00000578143 78 ntBASIC0.51□□□□□ -2.33
NOTCH3Q9UM47 U6.58-201ENST00000613107 107 ntBASIC0.51□□□□□ -2.33
NOTCH3Q9UM47 SNORD114-24-201ENST00000365029 72 ntBASIC0.5□□□□□ -2.33
NOTCH3Q9UM47 MIR140-201ENST00000385282 100 ntBASIC0.5□□□□□ -2.33
NOTCH3Q9UM47 RNU6-229P-201ENST00000516614 102 ntBASIC0.5□□□□□ -2.33
NOTCH3Q9UM47 RNU6-502P-201ENST00000362419 108 ntBASIC0.5□□□□□ -2.33
NOTCH3Q9UM47 MIR429-201ENST00000362106 83 ntBASIC0.49□□□□□ -2.33
NOTCH3Q9UM47 MIR501-201ENST00000390204 84 ntBASIC0.49□□□□□ -2.33
NOTCH3Q9UM47 RNU6-175P-201ENST00000516896 107 ntBASIC0.49□□□□□ -2.33
NOTCH3Q9UM47 RNU6-1036P-201ENST00000383959 104 ntBASIC0.49□□□□□ -2.33
NOTCH3Q9UM47 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.49□□□□□ -2.33
NOTCH3Q9UM47 RNU7-88P-201ENST00000458752 63 ntBASIC0.49□□□□□ -2.33
NOTCH3Q9UM47 RNU6-518P-201ENST00000516056 96 ntBASIC0.49□□□□□ -2.33
NOTCH3Q9UM47 Y_RNA.684-201ENST00000516510 99 ntBASIC0.49□□□□□ -2.33
NOTCH3Q9UM47 RNU6-1262P-201ENST00000516217 96 ntBASIC0.48□□□□□ -2.33
NOTCH3Q9UM47 MIR4493-201ENST00000584016 73 ntBASIC0.48□□□□□ -2.33
NOTCH3Q9UM47 Y_RNA.55-201ENST00000362797 102 ntBASIC0.48□□□□□ -2.33
NOTCH3Q9UM47 MIR548AA1-201ENST00000384971 97 ntBASIC0.48□□□□□ -2.33
NOTCH3Q9UM47 MIR146A-201ENST00000385201 99 ntBASIC0.48□□□□□ -2.33
NOTCH3Q9UM47 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
NOTCH3Q9UM47 RNU6-172P-201ENST00000411000 93 ntBASIC0.48□□□□□ -2.33
NOTCH3Q9UM47 AC084368.1-201ENST00000620935 65 ntBASIC0.48□□□□□ -2.33
NOTCH3Q9UM47 RNU6-838P-201ENST00000363399 108 ntBASIC0.47□□□□□ -2.33
NOTCH3Q9UM47 Y_RNA.139-201ENST00000363464 102 ntBASIC0.47□□□□□ -2.33
NOTCH3Q9UM47 MIR548F3-201ENST00000408509 87 ntBASIC0.47□□□□□ -2.33
NOTCH3Q9UM47 SNORD63.1-201ENST00000516178 80 ntBASIC0.47□□□□□ -2.33
NOTCH3Q9UM47 U7.5-201ENST00000517224 61 ntBASIC0.47□□□□□ -2.33
NOTCH3Q9UM47 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
NOTCH3Q9UM47 U2.18-201ENST00000622185 84 ntBASIC0.47□□□□□ -2.33
NOTCH3Q9UM47 RNA5SP517-201ENST00000364724 117 ntBASIC0.46□□□□□ -2.34
NOTCH3Q9UM47 Y_RNA.698-201ENST00000516798 118 ntBASIC0.46□□□□□ -2.34
NOTCH3Q9UM47 RNU7-188P-201ENST00000517063 64 ntBASIC0.46□□□□□ -2.34
NOTCH3Q9UM47 AC023932.2-201ENST00000603176 175 ntBASIC0.46□□□□□ -2.34
NOTCH3Q9UM47 RNU6-247P-201ENST00000362636 107 ntBASIC0.46□□□□□ -2.34
NOTCH3Q9UM47 SNORD115-23-201ENST00000364461 82 ntBASIC0.46□□□□□ -2.34
NOTCH3Q9UM47 MIR106A-201ENST00000384870 81 ntBASIC0.46□□□□□ -2.34
NOTCH3Q9UM47 MIR579-201ENST00000385221 98 ntBASIC0.46□□□□□ -2.34
NOTCH3Q9UM47 RNU6-696P-201ENST00000390834 107 ntBASIC0.46□□□□□ -2.34
NOTCH3Q9UM47 RPL39P28-201ENST00000465655 155 ntBASIC0.46□□□□□ -2.34
NOTCH3Q9UM47 RNA5SP470-201ENST00000516463 106 ntBASIC0.46□□□□□ -2.34
NOTCH3Q9UM47 MIR548AX-201ENST00000580117 73 ntBASIC0.46□□□□□ -2.34
NOTCH3Q9UM47 SNORA40.8-201ENST00000411034 126 ntBASIC0.45□□□□□ -2.34
NOTCH3Q9UM47 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.45□□□□□ -2.34
NOTCH3Q9UM47 SNORA62.5-201ENST00000516634 120 ntBASIC0.45□□□□□ -2.34
NOTCH3Q9UM47 MIR3925-201ENST00000584674 77 ntBASIC0.45□□□□□ -2.34
NOTCH3Q9UM47 MIR6718-201ENST00000616153 80 ntBASIC0.45□□□□□ -2.34
NOTCH3Q9UM47 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.45□□□□□ -2.34
NOTCH3Q9UM47 RNU6-848P-201ENST00000515948 107 ntBASIC0.44□□□□□ -2.34
NOTCH3Q9UM47 RNU6-617P-201ENST00000516147 107 ntBASIC0.44□□□□□ -2.34
NOTCH3Q9UM47 RNU6-473P-201ENST00000516164 107 ntBASIC0.44□□□□□ -2.34
NOTCH3Q9UM47 RNU6-1232P-201ENST00000516299 86 ntBASIC0.44□□□□□ -2.34
NOTCH3Q9UM47 RNU6-1049P-201ENST00000516414 107 ntBASIC0.44□□□□□ -2.34
NOTCH3Q9UM47 RNU7-160P-201ENST00000516660 62 ntBASIC0.44□□□□□ -2.34
NOTCH3Q9UM47 RNU6-419P-201ENST00000517030 63 ntBASIC0.44□□□□□ -2.34
NOTCH3Q9UM47 MIR4432-201ENST00000581823 84 ntBASIC0.44□□□□□ -2.34
NOTCH3Q9UM47 AP001180.6-201ENST00000584918 159 ntBASIC0.44□□□□□ -2.34
NOTCH3Q9UM47 MIR365A-201ENST00000362260 87 ntBASIC0.44□□□□□ -2.34
NOTCH3Q9UM47 SCARNA11.2-201ENST00000517183 154 ntBASIC0.44□□□□□ -2.34
NOTCH3Q9UM47 SNORD71-201ENST00000411292 86 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 RPS29P8-201ENST00000445109 171 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 AC069271.1-201ENST00000445577 156 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 RNA5SP227-201ENST00000516184 113 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 RNU6-782P-201ENST00000516852 104 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 AP000676.1-201ENST00000533307 52 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 MIR4661-201ENST00000582720 75 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 MIR92A1-201ENST00000385233 78 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 MIR548H4-201ENST00000408689 111 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 RNU6-721P-201ENST00000410155 105 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 MIR4752-201ENST00000579672 72 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 MIR4514-201ENST00000581410 57 ntBASIC0.43□□□□□ -2.34
NOTCH3Q9UM47 RNU6-742P-201ENST00000365289 107 ntBASIC0.42□□□□□ -2.34
NOTCH3Q9UM47 MIR125B1-201ENST00000385236 88 ntBASIC0.42□□□□□ -2.34
NOTCH3Q9UM47 RNU6-863P-201ENST00000515989 104 ntBASIC0.42□□□□□ -2.34
NOTCH3Q9UM47 RNU4-54P-201ENST00000516428 129 ntBASIC0.42□□□□□ -2.34
NOTCH3Q9UM47 uc_338.17-201ENST00000619633 179 ntBASIC0.42□□□□□ -2.34
NOTCH3Q9UM47 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
NOTCH3Q9UM47 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.42□□□□□ -2.34
NOTCH3Q9UM47 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
NOTCH3Q9UM47 AL353765.1-201ENST00000605514 183 ntBASIC0.41□□□□□ -2.34
NOTCH3Q9UM47 Y_RNA.475-201ENST00000384345 101 ntBASIC0.41□□□□□ -2.34
NOTCH3Q9UM47 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.41□□□□□ -2.34
NOTCH3Q9UM47 U7.6-201ENST00000610841 64 ntBASIC0.41□□□□□ -2.34
NOTCH3Q9UM47 snoR1.1-201ENST00000628177 80 ntBASIC0.41□□□□□ -2.34
NOTCH3Q9UM47 MIR224-201ENST00000384889 81 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms