Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
DDX41Q9UJV9 MIR3666-201ENST00000607845 111 ntBASIC-0.24□□□□□ -2.45
DDX41Q9UJV9 uc_338.36-201ENST00000622331 158 ntBASIC-0.24□□□□□ -2.45
DDX41Q9UJV9 MIR655-201ENST00000362159 97 ntBASIC-0.25□□□□□ -2.45
DDX41Q9UJV9 SNORD115-31-201ENST00000365318 82 ntBASIC-0.26□□□□□ -2.45
DDX41Q9UJV9 RNA5SP25-201ENST00000410815 110 ntBASIC-0.26□□□□□ -2.45
DDX41Q9UJV9 U2.7-201ENST00000619197 100 ntBASIC-0.26□□□□□ -2.45
DDX41Q9UJV9 RNU6-518P-201ENST00000516056 96 ntBASIC-0.27□□□□□ -2.45
DDX41Q9UJV9 RNU6-758P-201ENST00000516292 89 ntBASIC-0.27□□□□□ -2.45
DDX41Q9UJV9 MIR4645-201ENST00000583158 77 ntBASIC-0.27□□□□□ -2.45
DDX41Q9UJV9 SNORD115-23-201ENST00000364461 82 ntBASIC-0.28□□□□□ -2.45
DDX41Q9UJV9 RNA5SP215-201ENST00000363440 122 ntBASIC-0.29□□□□□ -2.46
DDX41Q9UJV9 SNORA62.4-201ENST00000365504 151 ntBASIC-0.3□□□□□ -2.46
DDX41Q9UJV9 AC096531.1-201ENST00000419107 107 ntBASIC-0.3□□□□□ -2.46
DDX41Q9UJV9 RNU7-154P-201ENST00000516194 62 ntBASIC-0.3□□□□□ -2.46
DDX41Q9UJV9 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.31□□□□□ -2.46
DDX41Q9UJV9 MIR517B-201ENST00000385102 67 ntBASIC-0.31□□□□□ -2.46
DDX41Q9UJV9 RNA5SP66-201ENST00000517178 101 ntBASIC-0.31□□□□□ -2.46
DDX41Q9UJV9 AL353803.5-201ENST00000599815 141 ntBASIC-0.31□□□□□ -2.46
DDX41Q9UJV9 MIR101-1-201ENST00000362265 75 ntBASIC-0.32□□□□□ -2.46
DDX41Q9UJV9 snoU13.19-201ENST00000459148 104 ntBASIC-0.32□□□□□ -2.46
DDX41Q9UJV9 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.33□□□□□ -2.46
DDX41Q9UJV9 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.33□□□□□ -2.46
DDX41Q9UJV9 MIR604-201ENST00000384880 94 ntBASIC-0.33□□□□□ -2.46
DDX41Q9UJV9 RNU6-663P-201ENST00000391105 106 ntBASIC-0.33□□□□□ -2.46
DDX41Q9UJV9 AL445193.1-201ENST00000441183 141 ntBASIC-0.33□□□□□ -2.46
DDX41Q9UJV9 RNU6-523P-201ENST00000516304 54 ntBASIC-0.33□□□□□ -2.46
DDX41Q9UJV9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.33□□□□□ -2.46
DDX41Q9UJV9 MIR519A2-201ENST00000384990 87 ntBASIC-0.34□□□□□ -2.46
DDX41Q9UJV9 RNA5SP368-201ENST00000364298 116 ntBASIC-0.35□□□□□ -2.47
DDX41Q9UJV9 SNORD56B-201ENST00000384713 71 ntBASIC-0.35□□□□□ -2.47
DDX41Q9UJV9 RNA5SP300-201ENST00000391197 107 ntBASIC-0.35□□□□□ -2.47
DDX41Q9UJV9 SNORD30.1-201ENST00000391309 70 ntBASIC-0.35□□□□□ -2.47
DDX41Q9UJV9 AC108676.2-201ENST00000605225 163 ntBASIC-0.35□□□□□ -2.47
DDX41Q9UJV9 MIR4788-201ENST00000639104 80 ntBASIC-0.35□□□□□ -2.47
DDX41Q9UJV9 SNORD114-28-201ENST00000363610 72 ntBASIC-0.36□□□□□ -2.47
DDX41Q9UJV9 RNU6-540P-201ENST00000384622 101 ntBASIC-0.36□□□□□ -2.47
DDX41Q9UJV9 SNORD114-15-201ENST00000364687 72 ntBASIC-0.37□□□□□ -2.47
DDX41Q9UJV9 SNORD116-24-201ENST00000384549 92 ntBASIC-0.37□□□□□ -2.47
DDX41Q9UJV9 RNU6-320P-201ENST00000516511 106 ntBASIC-0.37□□□□□ -2.47
DDX41Q9UJV9 MIR6854-201ENST00000614935 69 ntBASIC-0.37□□□□□ -2.47
DDX41Q9UJV9 AC093726.3-201ENST00000637588 150 ntBASIC-0.37□□□□□ -2.47
DDX41Q9UJV9 SNORD95.1-201ENST00000364099 68 ntBASIC-0.38□□□□□ -2.47
DDX41Q9UJV9 RNU6-649P-201ENST00000384463 107 ntBASIC-0.38□□□□□ -2.47
DDX41Q9UJV9 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
DDX41Q9UJV9 RNU7-174P-201ENST00000516248 59 ntBASIC-0.38□□□□□ -2.47
DDX41Q9UJV9 MIR548V-201ENST00000584165 80 ntBASIC-0.38□□□□□ -2.47
DDX41Q9UJV9 AL590491.3-201ENST00000610731 82 ntBASIC-0.38□□□□□ -2.47
DDX41Q9UJV9 RNU6-698P-201ENST00000363523 107 ntBASIC-0.39□□□□□ -2.47
DDX41Q9UJV9 RNU6-34P-201ENST00000364874 107 ntBASIC-0.39□□□□□ -2.47
DDX41Q9UJV9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.39□□□□□ -2.47
DDX41Q9UJV9 SNORD114-11-201ENST00000363738 75 ntBASIC-0.4□□□□□ -2.47
DDX41Q9UJV9 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.4□□□□□ -2.47
DDX41Q9UJV9 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
DDX41Q9UJV9 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.42□□□□□ -2.48
DDX41Q9UJV9 SNORD14C-201ENST00000365382 88 ntBASIC-0.42□□□□□ -2.48
DDX41Q9UJV9 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.42□□□□□ -2.48
DDX41Q9UJV9 SNORD113-2-201ENST00000391082 72 ntBASIC-0.42□□□□□ -2.48
DDX41Q9UJV9 RNU6-630P-201ENST00000391258 106 ntBASIC-0.42□□□□□ -2.48
DDX41Q9UJV9 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
DDX41Q9UJV9 RNU6-539P-201ENST00000516665 103 ntBASIC-0.42□□□□□ -2.48
DDX41Q9UJV9 MIR5704-201ENST00000584029 77 ntBASIC-0.42□□□□□ -2.48
DDX41Q9UJV9 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.43□□□□□ -2.48
DDX41Q9UJV9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.43□□□□□ -2.48
DDX41Q9UJV9 MIR196A2-201ENST00000385189 110 ntBASIC-0.43□□□□□ -2.48
DDX41Q9UJV9 RNU6-542P-201ENST00000516405 103 ntBASIC-0.43□□□□□ -2.48
DDX41Q9UJV9 MIR4280-201ENST00000582178 76 ntBASIC-0.43□□□□□ -2.48
DDX41Q9UJV9 RNA5SP451-201ENST00000410588 110 ntBASIC-0.44□□□□□ -2.48
DDX41Q9UJV9 MIR204-201ENST00000385200 110 ntBASIC-0.45□□□□□ -2.48
DDX41Q9UJV9 MIR8064-201ENST00000612863 90 ntBASIC-0.45□□□□□ -2.48
DDX41Q9UJV9 MIR6851-201ENST00000617060 67 ntBASIC-0.45□□□□□ -2.48
DDX41Q9UJV9 AL627230.5-201ENST00000619807 58 ntBASIC-0.45□□□□□ -2.48
DDX41Q9UJV9 SNORA25.4-201ENST00000363666 124 ntBASIC-0.47□□□□□ -2.48
DDX41Q9UJV9 SNORA32.3-201ENST00000384772 121 ntBASIC-0.47□□□□□ -2.48
DDX41Q9UJV9 MIR630-201ENST00000384957 97 ntBASIC-0.47□□□□□ -2.48
DDX41Q9UJV9 RNU6-30P-201ENST00000384561 107 ntBASIC-0.48□□□□□ -2.49
DDX41Q9UJV9 RNU6-284P-201ENST00000411105 106 ntBASIC-0.48□□□□□ -2.49
DDX41Q9UJV9 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.49□□□□□ -2.49
DDX41Q9UJV9 RPS29P8-201ENST00000445109 171 ntBASIC-0.49□□□□□ -2.49
DDX41Q9UJV9 SNORA13-201ENST00000458790 133 ntBASIC-0.49□□□□□ -2.49
DDX41Q9UJV9 SNORD38.3-201ENST00000516599 73 ntBASIC-0.49□□□□□ -2.49
DDX41Q9UJV9 U6.111-201ENST00000636093 83 ntBASIC-0.49□□□□□ -2.49
DDX41Q9UJV9 MIR429-201ENST00000362106 83 ntBASIC-0.5□□□□□ -2.49
DDX41Q9UJV9 AC114755.3-201ENST00000481111 251 ntBASIC-0.5□□□□□ -2.49
DDX41Q9UJV9 MIR518B-201ENST00000385127 83 ntBASIC-0.51□□□□□ -2.49
DDX41Q9UJV9 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.51□□□□□ -2.49
DDX41Q9UJV9 RNA5SP169-201ENST00000517268 117 ntBASIC-0.51□□□□□ -2.49
DDX41Q9UJV9 SNORD74.6-201ENST00000364796 70 ntBASIC-0.52□□□□□ -2.49
DDX41Q9UJV9 MIR8068-201ENST00000618032 68 ntBASIC-0.52□□□□□ -2.49
DDX41Q9UJV9 RNU6-924P-201ENST00000362926 108 ntBASIC-0.53□□□□□ -2.49
DDX41Q9UJV9 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.53□□□□□ -2.49
DDX41Q9UJV9 MIR527-201ENST00000385244 85 ntBASIC-0.53□□□□□ -2.49
DDX41Q9UJV9 U4.4-201ENST00000620626 117 ntBASIC-0.53□□□□□ -2.49
DDX41Q9UJV9 MIR224-201ENST00000384889 81 ntBASIC-0.54□□□□□ -2.5
DDX41Q9UJV9 MIR4436A-201ENST00000585278 85 ntBASIC-0.54□□□□□ -2.5
DDX41Q9UJV9 AL445584.3-201ENST00000617173 78 ntBASIC-0.54□□□□□ -2.5
DDX41Q9UJV9 MIR6888-201ENST00000621977 67 ntBASIC-0.54□□□□□ -2.5
DDX41Q9UJV9 AC114801.3-201ENST00000510231 177 ntBASIC-0.55□□□□□ -2.5
DDX41Q9UJV9 MIR4464-201ENST00000580818 92 ntBASIC-0.55□□□□□ -2.5
DDX41Q9UJV9 MIR548AZ-201ENST00000616567 95 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms