Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.39□□□□□ -2.63
VMP1Q96GC9 MIR548C-201ENST00000384815 97 ntBASIC-1.39□□□□□ -2.63
VMP1Q96GC9 RNU6-267P-201ENST00000516714 103 ntBASIC-1.39□□□□□ -2.63
VMP1Q96GC9 RNU6-330P-201ENST00000363015 107 ntBASIC-1.4□□□□□ -2.63
VMP1Q96GC9 RNU6-686P-201ENST00000364839 107 ntBASIC-1.4□□□□□ -2.63
VMP1Q96GC9 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.4□□□□□ -2.63
VMP1Q96GC9 RNU6-246P-201ENST00000384702 107 ntBASIC-1.4□□□□□ -2.63
VMP1Q96GC9 RNU6-755P-201ENST00000364400 103 ntBASIC-1.41□□□□□ -2.64
VMP1Q96GC9 SNORA8.1-201ENST00000384250 140 ntBASIC-1.41□□□□□ -2.64
VMP1Q96GC9 RNU7-88P-201ENST00000458752 63 ntBASIC-1.41□□□□□ -2.64
VMP1Q96GC9 U7.5-201ENST00000517224 61 ntBASIC-1.41□□□□□ -2.64
VMP1Q96GC9 MIR6818-201ENST00000621576 65 ntBASIC-1.42□□□□□ -2.64
VMP1Q96GC9 RNU4-61P-201ENST00000411243 107 ntBASIC-1.43□□□□□ -2.64
VMP1Q96GC9 AC074348.1-201ENST00000426503 132 ntBASIC-1.43□□□□□ -2.64
VMP1Q96GC9 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.43□□□□□ -2.64
VMP1Q96GC9 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.44□□□□□ -2.64
VMP1Q96GC9 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.44□□□□□ -2.64
VMP1Q96GC9 RNU6-604P-201ENST00000390917 100 ntBASIC-1.44□□□□□ -2.64
VMP1Q96GC9 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.44□□□□□ -2.64
VMP1Q96GC9 SNORD113-1-201ENST00000365321 69 ntBASIC-1.45□□□□□ -2.64
VMP1Q96GC9 MIR507-201ENST00000385234 94 ntBASIC-1.45□□□□□ -2.64
VMP1Q96GC9 RNU6-129P-201ENST00000391022 107 ntBASIC-1.45□□□□□ -2.64
VMP1Q96GC9 RNU7-174P-201ENST00000516248 59 ntBASIC-1.45□□□□□ -2.64
VMP1Q96GC9 RNU6-478P-201ENST00000363904 110 ntBASIC-1.46□□□□□ -2.64
VMP1Q96GC9 MIR488-201ENST00000365739 83 ntBASIC-1.46□□□□□ -2.64
VMP1Q96GC9 RNU6-32P-201ENST00000383948 107 ntBASIC-1.46□□□□□ -2.64
VMP1Q96GC9 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.46□□□□□ -2.64
VMP1Q96GC9 RNU6-13P-201ENST00000384248 107 ntBASIC-1.46□□□□□ -2.64
VMP1Q96GC9 RNU6-12P-201ENST00000384604 107 ntBASIC-1.46□□□□□ -2.64
VMP1Q96GC9 RNU6-41P-201ENST00000384741 107 ntBASIC-1.46□□□□□ -2.64
VMP1Q96GC9 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.46□□□□□ -2.64
VMP1Q96GC9 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.46□□□□□ -2.64
VMP1Q96GC9 MIR5683-201ENST00000636514 76 ntBASIC-1.46□□□□□ -2.64
VMP1Q96GC9 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.46□□□□□ -2.64
VMP1Q96GC9 SNORD45.1-201ENST00000363181 77 ntBASIC-1.47□□□□□ -2.64
VMP1Q96GC9 RNU6-576P-201ENST00000390854 102 ntBASIC-1.47□□□□□ -2.64
VMP1Q96GC9 SNORD19-201ENST00000391191 68 ntBASIC-1.47□□□□□ -2.64
VMP1Q96GC9 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.47□□□□□ -2.64
VMP1Q96GC9 RNU6-706P-201ENST00000517229 104 ntBASIC-1.47□□□□□ -2.64
VMP1Q96GC9 MIR4490-201ENST00000582647 84 ntBASIC-1.47□□□□□ -2.64
VMP1Q96GC9 RNA5SP26-201ENST00000362406 119 ntBASIC-1.48□□□□□ -2.65
VMP1Q96GC9 RNU6-640P-201ENST00000363693 105 ntBASIC-1.48□□□□□ -2.65
VMP1Q96GC9 RNU6-675P-201ENST00000384236 104 ntBASIC-1.48□□□□□ -2.65
VMP1Q96GC9 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.48□□□□□ -2.65
VMP1Q96GC9 RNU6-982P-201ENST00000516216 102 ntBASIC-1.48□□□□□ -2.65
VMP1Q96GC9 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.49□□□□□ -2.65
VMP1Q96GC9 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.49□□□□□ -2.65
VMP1Q96GC9 RNU6-458P-201ENST00000384179 107 ntBASIC-1.49□□□□□ -2.65
VMP1Q96GC9 RNU7-134P-201ENST00000458997 64 ntBASIC-1.49□□□□□ -2.65
VMP1Q96GC9 AP002795.1-201ENST00000534879 84 ntBASIC-1.49□□□□□ -2.65
VMP1Q96GC9 U6.58-201ENST00000613107 107 ntBASIC-1.49□□□□□ -2.65
VMP1Q96GC9 MIR1297-201ENST00000637311 77 ntBASIC-1.49□□□□□ -2.65
VMP1Q96GC9 RNU6-844P-201ENST00000517175 102 ntBASIC-1.5□□□□□ -2.65
VMP1Q96GC9 AC006160.2-201ENST00000637708 154 ntBASIC-1.5□□□□□ -2.65
VMP1Q96GC9 SNORA63.4-201ENST00000362763 126 ntBASIC-1.51□□□□□ -2.65
VMP1Q96GC9 RNU6-380P-201ENST00000410207 107 ntBASIC-1.51□□□□□ -2.65
VMP1Q96GC9 RNA5SP180-201ENST00000516181 101 ntBASIC-1.51□□□□□ -2.65
VMP1Q96GC9 RNU6-147P-201ENST00000383983 107 ntBASIC-1.52□□□□□ -2.65
VMP1Q96GC9 SNX3P1X-201ENST00000414887 175 ntBASIC-1.52□□□□□ -2.65
VMP1Q96GC9 MIR4484-201ENST00000582855 83 ntBASIC-1.52□□□□□ -2.65
VMP1Q96GC9 MIR429-201ENST00000362106 83 ntBASIC-1.53□□□□□ -2.65
VMP1Q96GC9 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.53□□□□□ -2.65
VMP1Q96GC9 MIR527-201ENST00000385244 85 ntBASIC-1.53□□□□□ -2.65
VMP1Q96GC9 RNU6-587P-201ENST00000391282 106 ntBASIC-1.53□□□□□ -2.65
VMP1Q96GC9 MIR548Q-201ENST00000408404 100 ntBASIC-1.53□□□□□ -2.65
VMP1Q96GC9 RNU6-698P-201ENST00000363523 107 ntBASIC-1.54□□□□□ -2.66
VMP1Q96GC9 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.54□□□□□ -2.66
VMP1Q96GC9 RNU6-34P-201ENST00000364874 107 ntBASIC-1.54□□□□□ -2.66
VMP1Q96GC9 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.54□□□□□ -2.66
VMP1Q96GC9 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.55□□□□□ -2.66
VMP1Q96GC9 RNU6-696P-201ENST00000390834 107 ntBASIC-1.55□□□□□ -2.66
VMP1Q96GC9 AL606753.1-201ENST00000427435 87 ntBASIC-1.55□□□□□ -2.66
VMP1Q96GC9 MTND4LP1-201ENST00000446263 157 ntBASIC-1.55□□□□□ -2.66
VMP1Q96GC9 AL627230.5-201ENST00000619807 58 ntBASIC-1.55□□□□□ -2.66
VMP1Q96GC9 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.56□□□□□ -2.66
VMP1Q96GC9 RNU6-164P-201ENST00000364604 103 ntBASIC-1.56□□□□□ -2.66
VMP1Q96GC9 RNA5SP331-201ENST00000364986 107 ntBASIC-1.56□□□□□ -2.66
VMP1Q96GC9 RNU6-215P-201ENST00000365169 102 ntBASIC-1.56□□□□□ -2.66
VMP1Q96GC9 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.56□□□□□ -2.66
VMP1Q96GC9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
VMP1Q96GC9 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.56□□□□□ -2.66
VMP1Q96GC9 RNU6-919P-201ENST00000516731 104 ntBASIC-1.56□□□□□ -2.66
VMP1Q96GC9 MIR8053-201ENST00000613344 75 ntBASIC-1.57□□□□□ -2.66
VMP1Q96GC9 U4.4-201ENST00000620626 117 ntBASIC-1.57□□□□□ -2.66
VMP1Q96GC9 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.58□□□□□ -2.66
VMP1Q96GC9 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.58□□□□□ -2.66
VMP1Q96GC9 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.58□□□□□ -2.66
VMP1Q96GC9 MIR601-201ENST00000385256 79 ntBASIC-1.58□□□□□ -2.66
VMP1Q96GC9 RNU6-315P-201ENST00000362666 107 ntBASIC-1.59□□□□□ -2.66
VMP1Q96GC9 SNORD20-201ENST00000384550 80 ntBASIC-1.59□□□□□ -2.66
VMP1Q96GC9 RPL35AP4-201ENST00000412007 102 ntBASIC-1.59□□□□□ -2.66
VMP1Q96GC9 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.59□□□□□ -2.66
VMP1Q96GC9 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.59□□□□□ -2.66
VMP1Q96GC9 MIR548V-201ENST00000584165 80 ntBASIC-1.59□□□□□ -2.66
VMP1Q96GC9 AC138207.3-201ENST00000585289 166 ntBASIC-1.59□□□□□ -2.66
VMP1Q96GC9 RNA5SP215-201ENST00000363440 122 ntBASIC-1.6□□□□□ -2.67
VMP1Q96GC9 RNU6-668P-201ENST00000364180 107 ntBASIC-1.6□□□□□ -2.67
VMP1Q96GC9 HLA-S-202ENST00000425174 53 ntBASIC-1.6□□□□□ -2.67
VMP1Q96GC9 MIR198-201ENST00000637333 62 ntBASIC-1.6□□□□□ -2.67
VMP1Q96GC9 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms