Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RNU6-450P-201ENST00000364654 107 ntBASIC-1.28□□□□□ -2.61
TTC28Q96AY4 MIR4777-201ENST00000583710 86 ntBASIC-1.28□□□□□ -2.61
TTC28Q96AY4 AC062037.1-201ENST00000605302 128 ntBASIC-1.28□□□□□ -2.61
TTC28Q96AY4 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.28□□□□□ -2.61
TTC28Q96AY4 RNU6-590P-201ENST00000365039 107 ntBASIC-1.28□□□□□ -2.61
TTC28Q96AY4 RNU7-153P-201ENST00000516455 62 ntBASIC-1.28□□□□□ -2.61
TTC28Q96AY4 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.28□□□□□ -2.61
TTC28Q96AY4 MIR4694-201ENST00000578534 80 ntBASIC-1.28□□□□□ -2.61
TTC28Q96AY4 AC113195.1-201ENST00000579952 141 ntBASIC-1.28□□□□□ -2.61
TTC28Q96AY4 MIR548Z-201ENST00000584743 97 ntBASIC-1.28□□□□□ -2.61
TTC28Q96AY4 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.29□□□□□ -2.62
TTC28Q96AY4 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.29□□□□□ -2.62
TTC28Q96AY4 RNU6-129P-201ENST00000391022 107 ntBASIC-1.29□□□□□ -2.62
TTC28Q96AY4 RNU6-523P-201ENST00000516304 54 ntBASIC-1.29□□□□□ -2.62
TTC28Q96AY4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.29□□□□□ -2.62
TTC28Q96AY4 RNU6-361P-201ENST00000364454 107 ntBASIC-1.29□□□□□ -2.62
TTC28Q96AY4 RNU6-806P-201ENST00000365147 105 ntBASIC-1.29□□□□□ -2.62
TTC28Q96AY4 MTND1P19-201ENST00000511780 315 ntBASIC-1.29□□□□□ -2.62
TTC28Q96AY4 RNU7-121P-201ENST00000516604 62 ntBASIC-1.29□□□□□ -2.62
TTC28Q96AY4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.29□□□□□ -2.62
TTC28Q96AY4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.29□□□□□ -2.62
TTC28Q96AY4 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.3□□□□□ -2.62
TTC28Q96AY4 MTND2P23-201ENST00000422990 651 ntBASIC-1.3□□□□□ -2.62
TTC28Q96AY4 AC093729.1-201ENST00000513074 128 ntBASIC-1.3□□□□□ -2.62
TTC28Q96AY4 MIR4643-201ENST00000577473 78 ntBASIC-1.3□□□□□ -2.62
TTC28Q96AY4 MIR4282-201ENST00000583613 67 ntBASIC-1.3□□□□□ -2.62
TTC28Q96AY4 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.3□□□□□ -2.62
TTC28Q96AY4 RNU6-822P-201ENST00000362707 106 ntBASIC-1.3□□□□□ -2.62
TTC28Q96AY4 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.3□□□□□ -2.62
TTC28Q96AY4 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.3□□□□□ -2.62
TTC28Q96AY4 MIR125B1-201ENST00000385236 88 ntBASIC-1.3□□□□□ -2.62
TTC28Q96AY4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
TTC28Q96AY4 MIR4426-201ENST00000640330 63 ntBASIC-1.3□□□□□ -2.62
TTC28Q96AY4 SNORD116-10-201ENST00000363791 102 ntBASIC-1.31□□□□□ -2.62
TTC28Q96AY4 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.31□□□□□ -2.62
TTC28Q96AY4 MIR548D2-201ENST00000384955 97 ntBASIC-1.31□□□□□ -2.62
TTC28Q96AY4 MT-TL1-201ENST00000386347 75 ntBASIC-1.31□□□□□ -2.62
TTC28Q96AY4 SNORD19B-201ENST00000459623 84 ntBASIC-1.31□□□□□ -2.62
TTC28Q96AY4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.31□□□□□ -2.62
TTC28Q96AY4 U2.14-201ENST00000615943 113 ntBASIC-1.31□□□□□ -2.62
TTC28Q96AY4 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.31□□□□□ -2.62
TTC28Q96AY4 RNU6-986P-201ENST00000363133 102 ntBASIC-1.32□□□□□ -2.62
TTC28Q96AY4 SNORD58A-201ENST00000383875 65 ntBASIC-1.32□□□□□ -2.62
TTC28Q96AY4 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.32□□□□□ -2.62
TTC28Q96AY4 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.32□□□□□ -2.62
TTC28Q96AY4 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.32□□□□□ -2.62
TTC28Q96AY4 SNORD45B-201ENST00000364617 72 ntBASIC-1.32□□□□□ -2.62
TTC28Q96AY4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
TTC28Q96AY4 RNU6-972P-201ENST00000391208 107 ntBASIC-1.32□□□□□ -2.62
TTC28Q96AY4 RNY3P8-201ENST00000411366 126 ntBASIC-1.32□□□□□ -2.62
TTC28Q96AY4 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.32□□□□□ -2.62
TTC28Q96AY4 MIR3658-201ENST00000636291 56 ntBASIC-1.32□□□□□ -2.62
TTC28Q96AY4 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.33□□□□□ -2.62
TTC28Q96AY4 AC130289.1-201ENST00000577321 73 ntBASIC-1.33□□□□□ -2.62
TTC28Q96AY4 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.33□□□□□ -2.62
TTC28Q96AY4 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.33□□□□□ -2.62
TTC28Q96AY4 RNU6-669P-201ENST00000365575 107 ntBASIC-1.33□□□□□ -2.62
TTC28Q96AY4 SNORD77.2-201ENST00000391045 68 ntBASIC-1.33□□□□□ -2.62
TTC28Q96AY4 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.33□□□□□ -2.62
TTC28Q96AY4 MIR3908-201ENST00000579798 126 ntBASIC-1.33□□□□□ -2.62
TTC28Q96AY4 SNORA75.5-201ENST00000391291 81 ntBASIC-1.34□□□□□ -2.62
TTC28Q96AY4 MIR3675-201ENST00000583661 73 ntBASIC-1.34□□□□□ -2.62
TTC28Q96AY4 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.35□□□□□ -2.63
TTC28Q96AY4 MTND4LP1-201ENST00000446263 157 ntBASIC-1.35□□□□□ -2.63
TTC28Q96AY4 MIR548V-201ENST00000584165 80 ntBASIC-1.35□□□□□ -2.63
TTC28Q96AY4 MIR8062-201ENST00000621515 85 ntBASIC-1.35□□□□□ -2.63
TTC28Q96AY4 MIR7978-201ENST00000636158 59 ntBASIC-1.35□□□□□ -2.63
TTC28Q96AY4 RNU6-303P-201ENST00000517091 106 ntBASIC-1.36□□□□□ -2.63
TTC28Q96AY4 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.36□□□□□ -2.63
TTC28Q96AY4 SNORD60.1-201ENST00000362451 73 ntBASIC-1.37□□□□□ -2.63
TTC28Q96AY4 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.37□□□□□ -2.63
TTC28Q96AY4 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.37□□□□□ -2.63
TTC28Q96AY4 RNY3P16-201ENST00000516338 101 ntBASIC-1.37□□□□□ -2.63
TTC28Q96AY4 AC103810.7-201ENST00000607821 91 ntBASIC-1.37□□□□□ -2.63
TTC28Q96AY4 RNU6-598P-201ENST00000364017 105 ntBASIC-1.37□□□□□ -2.63
TTC28Q96AY4 SNORD116-16-201ENST00000384533 92 ntBASIC-1.37□□□□□ -2.63
TTC28Q96AY4 MIR519C-201ENST00000385053 87 ntBASIC-1.37□□□□□ -2.63
TTC28Q96AY4 RNY3P2-201ENST00000362918 102 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 RNU6-620P-201ENST00000384017 96 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 RNY4P18-201ENST00000391107 89 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 MIR4796-201ENST00000580742 81 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 RNU6-153P-201ENST00000364422 104 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 SNORA17.4-201ENST00000391287 132 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 MIR548F1-201ENST00000408667 84 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 RNU6-182P-201ENST00000516970 105 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.38□□□□□ -2.63
TTC28Q96AY4 RNU6-627P-201ENST00000364032 102 ntBASIC-1.39□□□□□ -2.63
TTC28Q96AY4 MIR1263-201ENST00000408324 86 ntBASIC-1.39□□□□□ -2.63
TTC28Q96AY4 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.39□□□□□ -2.63
TTC28Q96AY4 RNU6-537P-201ENST00000517277 103 ntBASIC-1.39□□□□□ -2.63
TTC28Q96AY4 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.39□□□□□ -2.63
TTC28Q96AY4 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.39□□□□□ -2.63
TTC28Q96AY4 RNU6-300P-201ENST00000459080 104 ntBASIC-1.39□□□□□ -2.63
TTC28Q96AY4 MIR5009-201ENST00000578736 100 ntBASIC-1.39□□□□□ -2.63
TTC28Q96AY4 MIR664A-201ENST00000626086 82 ntBASIC-1.39□□□□□ -2.63
TTC28Q96AY4 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms