Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MIR3675-201ENST00000583661 73 ntBASIC-1.17□□□□□ -2.6
VPS33AQ96AX1 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.17□□□□□ -2.6
VPS33AQ96AX1 MIR487B-201ENST00000385021 84 ntBASIC-1.18□□□□□ -2.6
VPS33AQ96AX1 MIR1265-201ENST00000408444 86 ntBASIC-1.18□□□□□ -2.6
VPS33AQ96AX1 AC093729.1-201ENST00000513074 128 ntBASIC-1.18□□□□□ -2.6
VPS33AQ96AX1 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.18□□□□□ -2.6
VPS33AQ96AX1 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.19□□□□□ -2.6
VPS33AQ96AX1 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.19□□□□□ -2.6
VPS33AQ96AX1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.19□□□□□ -2.6
VPS33AQ96AX1 AC008267.6-201ENST00000441664 139 ntBASIC-1.19□□□□□ -2.6
VPS33AQ96AX1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.19□□□□□ -2.6
VPS33AQ96AX1 RNU6-589P-201ENST00000516485 107 ntBASIC-1.19□□□□□ -2.6
VPS33AQ96AX1 MIR548V-201ENST00000584165 80 ntBASIC-1.19□□□□□ -2.6
VPS33AQ96AX1 AL365222.1-201ENST00000614661 98 ntBASIC-1.19□□□□□ -2.6
VPS33AQ96AX1 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.2□□□□□ -2.6
VPS33AQ96AX1 SNORD45.1-201ENST00000363181 77 ntBASIC-1.2□□□□□ -2.6
VPS33AQ96AX1 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.2□□□□□ -2.6
VPS33AQ96AX1 RNU6-959P-201ENST00000384671 107 ntBASIC-1.2□□□□□ -2.6
VPS33AQ96AX1 RNU6-402P-201ENST00000410678 103 ntBASIC-1.2□□□□□ -2.6
VPS33AQ96AX1 RNU6-557P-201ENST00000516842 110 ntBASIC-1.2□□□□□ -2.6
VPS33AQ96AX1 RNU6-303P-201ENST00000517091 106 ntBASIC-1.2□□□□□ -2.6
VPS33AQ96AX1 RNU6-698P-201ENST00000363523 107 ntBASIC-1.21□□□□□ -2.6
VPS33AQ96AX1 RNU6-34P-201ENST00000364874 107 ntBASIC-1.21□□□□□ -2.6
VPS33AQ96AX1 RNU6-35P-201ENST00000384530 107 ntBASIC-1.21□□□□□ -2.6
VPS33AQ96AX1 SNORA41B-201ENST00000384785 128 ntBASIC-1.21□□□□□ -2.6
VPS33AQ96AX1 MIR587-201ENST00000384845 96 ntBASIC-1.21□□□□□ -2.6
VPS33AQ96AX1 MIR630-201ENST00000384957 97 ntBASIC-1.21□□□□□ -2.6
VPS33AQ96AX1 SNORD113-2-201ENST00000391082 72 ntBASIC-1.21□□□□□ -2.6
VPS33AQ96AX1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.21□□□□□ -2.6
VPS33AQ96AX1 RNU6-158P-201ENST00000517104 100 ntBASIC-1.21□□□□□ -2.6
VPS33AQ96AX1 MIR548BB-201ENST00000626714 66 ntBASIC-1.21□□□□□ -2.6
VPS33AQ96AX1 RNU6-766P-201ENST00000362478 107 ntBASIC-1.22□□□□□ -2.6
VPS33AQ96AX1 RNU6-540P-201ENST00000384622 101 ntBASIC-1.22□□□□□ -2.6
VPS33AQ96AX1 AC018880.2-201ENST00000414265 201 ntBASIC-1.22□□□□□ -2.6
VPS33AQ96AX1 MIR3170-201ENST00000582699 77 ntBASIC-1.22□□□□□ -2.6
VPS33AQ96AX1 MIR664A-201ENST00000626086 82 ntBASIC-1.22□□□□□ -2.6
VPS33AQ96AX1 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.23□□□□□ -2.61
VPS33AQ96AX1 SNORA8.1-201ENST00000384250 140 ntBASIC-1.23□□□□□ -2.61
VPS33AQ96AX1 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.23□□□□□ -2.61
VPS33AQ96AX1 RNA5SP25-201ENST00000410815 110 ntBASIC-1.23□□□□□ -2.61
VPS33AQ96AX1 MIR548AX-201ENST00000580117 73 ntBASIC-1.23□□□□□ -2.61
VPS33AQ96AX1 RNU6-686P-201ENST00000364839 107 ntBASIC-1.24□□□□□ -2.61
VPS33AQ96AX1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.24□□□□□ -2.61
VPS33AQ96AX1 MIR488-201ENST00000365739 83 ntBASIC-1.24□□□□□ -2.61
VPS33AQ96AX1 MIR548H1-201ENST00000408610 102 ntBASIC-1.24□□□□□ -2.61
VPS33AQ96AX1 MIR4484-201ENST00000582855 83 ntBASIC-1.24□□□□□ -2.61
VPS33AQ96AX1 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.24□□□□□ -2.61
VPS33AQ96AX1 MIR450A1-201ENST00000362262 91 ntBASIC-1.25□□□□□ -2.61
VPS33AQ96AX1 AC120024.2-201ENST00000576526 175 ntBASIC-1.25□□□□□ -2.61
VPS33AQ96AX1 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.26□□□□□ -2.61
VPS33AQ96AX1 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.26□□□□□ -2.61
VPS33AQ96AX1 RNU6-400P-201ENST00000391173 106 ntBASIC-1.26□□□□□ -2.61
VPS33AQ96AX1 AP001318.4-201ENST00000616637 121 ntBASIC-1.26□□□□□ -2.61
VPS33AQ96AX1 MALAT1.1-201ENST00000618249 95 ntBASIC-1.26□□□□□ -2.61
VPS33AQ96AX1 SNORD113.1-201ENST00000363280 73 ntBASIC-1.27□□□□□ -2.61
VPS33AQ96AX1 SNORD115-37-201ENST00000363768 82 ntBASIC-1.27□□□□□ -2.61
VPS33AQ96AX1 RNU6-81P-201ENST00000365608 104 ntBASIC-1.27□□□□□ -2.61
VPS33AQ96AX1 SNORD116-16-201ENST00000384533 92 ntBASIC-1.27□□□□□ -2.61
VPS33AQ96AX1 AC005520.4-201ENST00000604337 90 ntBASIC-1.27□□□□□ -2.61
VPS33AQ96AX1 RNU6-228P-201ENST00000362700 106 ntBASIC-1.28□□□□□ -2.61
VPS33AQ96AX1 SNORD1B-201ENST00000363091 84 ntBASIC-1.28□□□□□ -2.61
VPS33AQ96AX1 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.28□□□□□ -2.61
VPS33AQ96AX1 SNORD114-15-201ENST00000364687 72 ntBASIC-1.28□□□□□ -2.61
VPS33AQ96AX1 RNU6-974P-201ENST00000384099 108 ntBASIC-1.28□□□□□ -2.61
VPS33AQ96AX1 SNORD116-22-201ENST00000384430 92 ntBASIC-1.28□□□□□ -2.61
VPS33AQ96AX1 SNORD45A-201ENST00000384512 84 ntBASIC-1.28□□□□□ -2.61
VPS33AQ96AX1 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.28□□□□□ -2.61
VPS33AQ96AX1 RNU6-129P-201ENST00000391022 107 ntBASIC-1.28□□□□□ -2.61
VPS33AQ96AX1 AC013734.1-201ENST00000619329 111 ntBASIC-1.28□□□□□ -2.61
VPS33AQ96AX1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.28□□□□□ -2.61
VPS33AQ96AX1 RNU6-675P-201ENST00000384236 104 ntBASIC-1.29□□□□□ -2.62
VPS33AQ96AX1 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.29□□□□□ -2.62
VPS33AQ96AX1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.29□□□□□ -2.62
VPS33AQ96AX1 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.29□□□□□ -2.62
VPS33AQ96AX1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.29□□□□□ -2.62
VPS33AQ96AX1 AC006160.2-201ENST00000637708 154 ntBASIC-1.29□□□□□ -2.62
VPS33AQ96AX1 RNU6-640P-201ENST00000363693 105 ntBASIC-1.3□□□□□ -2.62
VPS33AQ96AX1 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.3□□□□□ -2.62
VPS33AQ96AX1 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.3□□□□□ -2.62
VPS33AQ96AX1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.3□□□□□ -2.62
VPS33AQ96AX1 SNORD116-24-201ENST00000384549 92 ntBASIC-1.3□□□□□ -2.62
VPS33AQ96AX1 RNY4P18-201ENST00000391107 89 ntBASIC-1.3□□□□□ -2.62
VPS33AQ96AX1 RNU6-695P-201ENST00000391157 104 ntBASIC-1.3□□□□□ -2.62
VPS33AQ96AX1 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.3□□□□□ -2.62
VPS33AQ96AX1 MIR7978-201ENST00000636158 59 ntBASIC-1.3□□□□□ -2.62
VPS33AQ96AX1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.3□□□□□ -2.62
VPS33AQ96AX1 RNU6-834P-201ENST00000362367 110 ntBASIC-1.31□□□□□ -2.62
VPS33AQ96AX1 RNU7-151P-201ENST00000516930 53 ntBASIC-1.31□□□□□ -2.62
VPS33AQ96AX1 SNORD18.1-201ENST00000363807 70 ntBASIC-1.32□□□□□ -2.62
VPS33AQ96AX1 MIR548AA1-201ENST00000384971 97 ntBASIC-1.32□□□□□ -2.62
VPS33AQ96AX1 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.32□□□□□ -2.62
VPS33AQ96AX1 AC108019.1-201ENST00000512540 175 ntBASIC-1.32□□□□□ -2.62
VPS33AQ96AX1 MIR4756-201ENST00000577874 78 ntBASIC-1.32□□□□□ -2.62
VPS33AQ96AX1 MIR3123-201ENST00000583417 75 ntBASIC-1.32□□□□□ -2.62
VPS33AQ96AX1 RNA5SP215-201ENST00000363440 122 ntBASIC-1.33□□□□□ -2.62
VPS33AQ96AX1 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.33□□□□□ -2.62
VPS33AQ96AX1 MIR579-201ENST00000385221 98 ntBASIC-1.33□□□□□ -2.62
VPS33AQ96AX1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
VPS33AQ96AX1 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.33□□□□□ -2.62
VPS33AQ96AX1 RNA5SP395-201ENST00000516567 118 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms