Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC139453.2-201ENST00000487255 133 ntBASIC-0.1□□□□□ -2.43
HIPK4Q8NE63 MIR548AG1-201ENST00000579932 66 ntBASIC-0.1□□□□□ -2.43
HIPK4Q8NE63 MIR5190-201ENST00000581537 80 ntBASIC-0.1□□□□□ -2.43
HIPK4Q8NE63 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.1□□□□□ -2.43
HIPK4Q8NE63 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.11□□□□□ -2.43
HIPK4Q8NE63 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.11□□□□□ -2.43
HIPK4Q8NE63 RNA5SP330-201ENST00000517096 96 ntBASIC-0.11□□□□□ -2.43
HIPK4Q8NE63 MIR4511-201ENST00000582784 87 ntBASIC-0.11□□□□□ -2.43
HIPK4Q8NE63 SNORA32.1-201ENST00000364514 115 ntBASIC-0.12□□□□□ -2.43
HIPK4Q8NE63 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.12□□□□□ -2.43
HIPK4Q8NE63 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.12□□□□□ -2.43
HIPK4Q8NE63 MIR1295B-201ENST00000636144 60 ntBASIC-0.12□□□□□ -2.43
HIPK4Q8NE63 RNU6-901P-201ENST00000384593 106 ntBASIC-0.13□□□□□ -2.43
HIPK4Q8NE63 MIR5704-201ENST00000584029 77 ntBASIC-0.13□□□□□ -2.43
HIPK4Q8NE63 SNORA18.1-201ENST00000363418 128 ntBASIC-0.14□□□□□ -2.43
HIPK4Q8NE63 RNU6-590P-201ENST00000365039 107 ntBASIC-0.14□□□□□ -2.43
HIPK4Q8NE63 SNORD113-2-201ENST00000391082 72 ntBASIC-0.14□□□□□ -2.43
HIPK4Q8NE63 MIR4464-201ENST00000580818 92 ntBASIC-0.14□□□□□ -2.43
HIPK4Q8NE63 AL590491.3-201ENST00000610731 82 ntBASIC-0.14□□□□□ -2.43
HIPK4Q8NE63 AC103706.3-201ENST00000636297 85 ntBASIC-0.14□□□□□ -2.43
HIPK4Q8NE63 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.15□□□□□ -2.43
HIPK4Q8NE63 SNORD114-12-201ENST00000365400 75 ntBASIC-0.15□□□□□ -2.43
HIPK4Q8NE63 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
HIPK4Q8NE63 SNORA62.4-201ENST00000365504 151 ntBASIC-0.17□□□□□ -2.44
HIPK4Q8NE63 RNU6-471P-201ENST00000383944 106 ntBASIC-0.17□□□□□ -2.44
HIPK4Q8NE63 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.17□□□□□ -2.44
HIPK4Q8NE63 MIR4280-201ENST00000582178 76 ntBASIC-0.17□□□□□ -2.44
HIPK4Q8NE63 MIR2909-201ENST00000617113 69 ntBASIC-0.17□□□□□ -2.44
HIPK4Q8NE63 MIR8068-201ENST00000618032 68 ntBASIC-0.17□□□□□ -2.44
HIPK4Q8NE63 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.18□□□□□ -2.44
HIPK4Q8NE63 AL445193.1-201ENST00000441183 141 ntBASIC-0.18□□□□□ -2.44
HIPK4Q8NE63 MIR6854-201ENST00000614935 69 ntBASIC-0.18□□□□□ -2.44
HIPK4Q8NE63 MIR6888-201ENST00000621977 67 ntBASIC-0.18□□□□□ -2.44
HIPK4Q8NE63 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.19□□□□□ -2.44
HIPK4Q8NE63 SNORD4A-201ENST00000459174 72 ntBASIC-0.19□□□□□ -2.44
HIPK4Q8NE63 AC114755.3-201ENST00000481111 251 ntBASIC-0.19□□□□□ -2.44
HIPK4Q8NE63 MIR3666-201ENST00000607845 111 ntBASIC-0.19□□□□□ -2.44
HIPK4Q8NE63 MIR6779-201ENST00000617283 64 ntBASIC-0.19□□□□□ -2.44
HIPK4Q8NE63 MIR1265-201ENST00000408444 86 ntBASIC-0.2□□□□□ -2.44
HIPK4Q8NE63 RNU6-92P-201ENST00000605893 104 ntBASIC-0.2□□□□□ -2.44
HIPK4Q8NE63 AL445584.3-201ENST00000617173 78 ntBASIC-0.2□□□□□ -2.44
HIPK4Q8NE63 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.21□□□□□ -2.44
HIPK4Q8NE63 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
HIPK4Q8NE63 RNA5SP66-201ENST00000517178 101 ntBASIC-0.21□□□□□ -2.44
HIPK4Q8NE63 MIR4263-201ENST00000584745 83 ntBASIC-0.21□□□□□ -2.44
HIPK4Q8NE63 AC108676.2-201ENST00000605225 163 ntBASIC-0.21□□□□□ -2.44
HIPK4Q8NE63 SNORA25.5-201ENST00000363782 126 ntBASIC-0.22□□□□□ -2.44
HIPK4Q8NE63 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
HIPK4Q8NE63 SNORA41B-201ENST00000384785 128 ntBASIC-0.23□□□□□ -2.45
HIPK4Q8NE63 MIR527-201ENST00000385244 85 ntBASIC-0.23□□□□□ -2.45
HIPK4Q8NE63 MIR6851-201ENST00000617060 67 ntBASIC-0.23□□□□□ -2.45
HIPK4Q8NE63 RNA5SP457-201ENST00000363657 124 ntBASIC-0.25□□□□□ -2.45
HIPK4Q8NE63 RNA5SP192-201ENST00000364404 120 ntBASIC-0.25□□□□□ -2.45
HIPK4Q8NE63 RNA5SP300-201ENST00000391197 107 ntBASIC-0.25□□□□□ -2.45
HIPK4Q8NE63 SNORD60.1-201ENST00000362451 73 ntBASIC-0.26□□□□□ -2.45
HIPK4Q8NE63 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.26□□□□□ -2.45
HIPK4Q8NE63 RNU6-246P-201ENST00000384702 107 ntBASIC-0.26□□□□□ -2.45
HIPK4Q8NE63 AC110620.1-201ENST00000416042 228 ntBASIC-0.26□□□□□ -2.45
HIPK4Q8NE63 SNORD38.3-201ENST00000516599 73 ntBASIC-0.26□□□□□ -2.45
HIPK4Q8NE63 SNORD116-16-201ENST00000384533 92 ntBASIC-0.27□□□□□ -2.45
HIPK4Q8NE63 AC093726.3-201ENST00000637588 150 ntBASIC-0.27□□□□□ -2.45
HIPK4Q8NE63 MIR4788-201ENST00000639104 80 ntBASIC-0.27□□□□□ -2.45
HIPK4Q8NE63 RNU6-458P-201ENST00000384179 107 ntBASIC-0.28□□□□□ -2.45
HIPK4Q8NE63 MIR214-201ENST00000385214 110 ntBASIC-0.28□□□□□ -2.45
HIPK4Q8NE63 AC125388.1-201ENST00000459631 156 ntBASIC-0.28□□□□□ -2.45
HIPK4Q8NE63 U6.58-201ENST00000613107 107 ntBASIC-0.28□□□□□ -2.45
HIPK4Q8NE63 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.29□□□□□ -2.46
HIPK4Q8NE63 RNU6-669P-201ENST00000365575 107 ntBASIC-0.29□□□□□ -2.46
HIPK4Q8NE63 SNORD114-11-201ENST00000363738 75 ntBASIC-0.3□□□□□ -2.46
HIPK4Q8NE63 RNU6-122P-201ENST00000516818 107 ntBASIC-0.3□□□□□ -2.46
HIPK4Q8NE63 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.3□□□□□ -2.46
HIPK4Q8NE63 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.31□□□□□ -2.46
HIPK4Q8NE63 MIR124-2-201ENST00000385081 109 ntBASIC-0.31□□□□□ -2.46
HIPK4Q8NE63 RNU6-788P-201ENST00000390967 104 ntBASIC-0.31□□□□□ -2.46
HIPK4Q8NE63 RNU6-320P-201ENST00000516511 106 ntBASIC-0.32□□□□□ -2.46
HIPK4Q8NE63 MIR429-201ENST00000362106 83 ntBASIC-0.33□□□□□ -2.46
HIPK4Q8NE63 RNU6-924P-201ENST00000362926 108 ntBASIC-0.35□□□□□ -2.47
HIPK4Q8NE63 RNU6-940P-201ENST00000363433 104 ntBASIC-0.35□□□□□ -2.47
HIPK4Q8NE63 RNA5SP275-201ENST00000363936 118 ntBASIC-0.35□□□□□ -2.47
HIPK4Q8NE63 RNA5SP169-201ENST00000517268 117 ntBASIC-0.35□□□□□ -2.47
HIPK4Q8NE63 SNORD74.6-201ENST00000364796 70 ntBASIC-0.36□□□□□ -2.47
HIPK4Q8NE63 MIR518B-201ENST00000385127 83 ntBASIC-0.36□□□□□ -2.47
HIPK4Q8NE63 U7.5-201ENST00000517224 61 ntBASIC-0.36□□□□□ -2.47
HIPK4Q8NE63 RNA5SP257-201ENST00000363023 116 ntBASIC-0.37□□□□□ -2.47
HIPK4Q8NE63 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.37□□□□□ -2.47
HIPK4Q8NE63 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.38□□□□□ -2.47
HIPK4Q8NE63 SNORD22.1-201ENST00000516331 125 ntBASIC-0.38□□□□□ -2.47
HIPK4Q8NE63 MIR466-201ENST00000580653 84 ntBASIC-0.38□□□□□ -2.47
HIPK4Q8NE63 SNORD1B-201ENST00000363091 84 ntBASIC-0.39□□□□□ -2.47
HIPK4Q8NE63 SNORD114-31-201ENST00000363219 75 ntBASIC-0.39□□□□□ -2.47
HIPK4Q8NE63 RNU6-598P-201ENST00000364017 105 ntBASIC-0.39□□□□□ -2.47
HIPK4Q8NE63 SNORD14C-201ENST00000365382 88 ntBASIC-0.39□□□□□ -2.47
HIPK4Q8NE63 SNORA32.3-201ENST00000384772 121 ntBASIC-0.39□□□□□ -2.47
HIPK4Q8NE63 MIR329-2-201ENST00000385029 84 ntBASIC-0.39□□□□□ -2.47
HIPK4Q8NE63 RNU7-88P-201ENST00000458752 63 ntBASIC-0.39□□□□□ -2.47
HIPK4Q8NE63 MIR204-201ENST00000385200 110 ntBASIC-0.4□□□□□ -2.47
HIPK4Q8NE63 SNORA13-201ENST00000458790 133 ntBASIC-0.41□□□□□ -2.48
HIPK4Q8NE63 SNORD114-28-201ENST00000363610 72 ntBASIC-0.42□□□□□ -2.48
HIPK4Q8NE63 RNU6-696P-201ENST00000390834 107 ntBASIC-0.42□□□□□ -2.48
HIPK4Q8NE63 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 384.1 ms