Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.28□□□□□ -2.45
SMC1BQ8NDV3 RNU6-587P-201ENST00000391282 106 ntBASIC-0.28□□□□□ -2.45
SMC1BQ8NDV3 RNA5SP470-201ENST00000516463 106 ntBASIC-0.28□□□□□ -2.45
SMC1BQ8NDV3 MIR3134-201ENST00000579433 74 ntBASIC-0.28□□□□□ -2.45
SMC1BQ8NDV3 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.28□□□□□ -2.45
SMC1BQ8NDV3 AL391099.1-201ENST00000624635 187 ntBASIC-0.28□□□□□ -2.45
SMC1BQ8NDV3 SNORD115-22-201ENST00000364456 82 ntBASIC-0.29□□□□□ -2.46
SMC1BQ8NDV3 MIR1255B2-201ENST00000408618 67 ntBASIC-0.29□□□□□ -2.46
SMC1BQ8NDV3 uc_338.36-201ENST00000622331 158 ntBASIC-0.29□□□□□ -2.46
SMC1BQ8NDV3 MIR4432-201ENST00000581823 84 ntBASIC-0.3□□□□□ -2.46
SMC1BQ8NDV3 AC090617.8-201ENST00000623339 167 ntBASIC-0.3□□□□□ -2.46
SMC1BQ8NDV3 RNU6-982P-201ENST00000516216 102 ntBASIC-0.31□□□□□ -2.46
SMC1BQ8NDV3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.31□□□□□ -2.46
SMC1BQ8NDV3 SNORD113.1-201ENST00000363280 73 ntBASIC-0.32□□□□□ -2.46
SMC1BQ8NDV3 RNU6-895P-201ENST00000384125 103 ntBASIC-0.32□□□□□ -2.46
SMC1BQ8NDV3 SNORD45A-201ENST00000384512 84 ntBASIC-0.32□□□□□ -2.46
SMC1BQ8NDV3 MIR548C-201ENST00000384815 97 ntBASIC-0.32□□□□□ -2.46
SMC1BQ8NDV3 SNORD115-23-201ENST00000364461 82 ntBASIC-0.33□□□□□ -2.46
SMC1BQ8NDV3 RNU6-881P-201ENST00000516813 102 ntBASIC-0.33□□□□□ -2.46
SMC1BQ8NDV3 RNA5SP66-201ENST00000517178 101 ntBASIC-0.33□□□□□ -2.46
SMC1BQ8NDV3 AL021921.1-201ENST00000442774 93 ntBASIC-0.34□□□□□ -2.46
SMC1BQ8NDV3 AC096531.1-201ENST00000419107 107 ntBASIC-0.35□□□□□ -2.47
SMC1BQ8NDV3 AL445193.1-201ENST00000441183 141 ntBASIC-0.35□□□□□ -2.47
SMC1BQ8NDV3 MIR4788-201ENST00000639104 80 ntBASIC-0.35□□□□□ -2.47
SMC1BQ8NDV3 RNU6-668P-201ENST00000364180 107 ntBASIC-0.36□□□□□ -2.47
SMC1BQ8NDV3 SNORD56B-201ENST00000384713 71 ntBASIC-0.36□□□□□ -2.47
SMC1BQ8NDV3 RNA5SP300-201ENST00000391197 107 ntBASIC-0.36□□□□□ -2.47
SMC1BQ8NDV3 RNU6-518P-201ENST00000516056 96 ntBASIC-0.37□□□□□ -2.47
SMC1BQ8NDV3 RNU6-687P-201ENST00000516443 89 ntBASIC-0.37□□□□□ -2.47
SMC1BQ8NDV3 AL590491.3-201ENST00000610731 82 ntBASIC-0.37□□□□□ -2.47
SMC1BQ8NDV3 MIR4662A-201ENST00000637499 67 ntBASIC-0.37□□□□□ -2.47
SMC1BQ8NDV3 SNORA62.4-201ENST00000365504 151 ntBASIC-0.38□□□□□ -2.47
SMC1BQ8NDV3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
SMC1BQ8NDV3 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.38□□□□□ -2.47
SMC1BQ8NDV3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.38□□□□□ -2.47
SMC1BQ8NDV3 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.39□□□□□ -2.47
SMC1BQ8NDV3 RNU7-154P-201ENST00000516194 62 ntBASIC-0.39□□□□□ -2.47
SMC1BQ8NDV3 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.39□□□□□ -2.47
SMC1BQ8NDV3 AL353803.5-201ENST00000599815 141 ntBASIC-0.39□□□□□ -2.47
SMC1BQ8NDV3 U2.7-201ENST00000619197 100 ntBASIC-0.39□□□□□ -2.47
SMC1BQ8NDV3 AC093726.3-201ENST00000637588 150 ntBASIC-0.39□□□□□ -2.47
SMC1BQ8NDV3 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.4□□□□□ -2.47
SMC1BQ8NDV3 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.4□□□□□ -2.47
SMC1BQ8NDV3 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
SMC1BQ8NDV3 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.4□□□□□ -2.47
SMC1BQ8NDV3 MIR6854-201ENST00000614935 69 ntBASIC-0.41□□□□□ -2.48
SMC1BQ8NDV3 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.42□□□□□ -2.48
SMC1BQ8NDV3 RNU6-871P-201ENST00000516122 100 ntBASIC-0.42□□□□□ -2.48
SMC1BQ8NDV3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.42□□□□□ -2.48
SMC1BQ8NDV3 MIR519A2-201ENST00000384990 87 ntBASIC-0.43□□□□□ -2.48
SMC1BQ8NDV3 RNA5SP215-201ENST00000363440 122 ntBASIC-0.44□□□□□ -2.48
SMC1BQ8NDV3 RNA5SP275-201ENST00000363936 118 ntBASIC-0.44□□□□□ -2.48
SMC1BQ8NDV3 SNORD115-31-201ENST00000365318 82 ntBASIC-0.44□□□□□ -2.48
SMC1BQ8NDV3 MIR601-201ENST00000385256 79 ntBASIC-0.44□□□□□ -2.48
SMC1BQ8NDV3 MIR889-201ENST00000401280 79 ntBASIC-0.44□□□□□ -2.48
SMC1BQ8NDV3 MIR4280-201ENST00000582178 76 ntBASIC-0.44□□□□□ -2.48
SMC1BQ8NDV3 MIR5704-201ENST00000584029 77 ntBASIC-0.44□□□□□ -2.48
SMC1BQ8NDV3 MIR517B-201ENST00000385102 67 ntBASIC-0.45□□□□□ -2.48
SMC1BQ8NDV3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.45□□□□□ -2.48
SMC1BQ8NDV3 RNU6-634P-201ENST00000459134 106 ntBASIC-0.45□□□□□ -2.48
SMC1BQ8NDV3 MIR6851-201ENST00000617060 67 ntBASIC-0.45□□□□□ -2.48
SMC1BQ8NDV3 RNU6-776P-201ENST00000364403 104 ntBASIC-0.46□□□□□ -2.48
SMC1BQ8NDV3 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.46□□□□□ -2.48
SMC1BQ8NDV3 MIR198-201ENST00000637333 62 ntBASIC-0.46□□□□□ -2.48
SMC1BQ8NDV3 MIR204-201ENST00000385200 110 ntBASIC-0.48□□□□□ -2.49
SMC1BQ8NDV3 RNU7-174P-201ENST00000516248 59 ntBASIC-0.49□□□□□ -2.49
SMC1BQ8NDV3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.5□□□□□ -2.49
SMC1BQ8NDV3 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.5□□□□□ -2.49
SMC1BQ8NDV3 SNORD38.3-201ENST00000516599 73 ntBASIC-0.5□□□□□ -2.49
SMC1BQ8NDV3 RNU6-698P-201ENST00000363523 107 ntBASIC-0.51□□□□□ -2.49
SMC1BQ8NDV3 RNU6-34P-201ENST00000364874 107 ntBASIC-0.51□□□□□ -2.49
SMC1BQ8NDV3 MT-TQ-201ENST00000387372 72 ntBASIC-0.51□□□□□ -2.49
SMC1BQ8NDV3 SNORA13-201ENST00000458790 133 ntBASIC-0.51□□□□□ -2.49
SMC1BQ8NDV3 MIR548AZ-201ENST00000616567 95 ntBASIC-0.51□□□□□ -2.49
SMC1BQ8NDV3 SNORD116-24-201ENST00000384549 92 ntBASIC-0.52□□□□□ -2.49
SMC1BQ8NDV3 AC114755.3-201ENST00000481111 251 ntBASIC-0.52□□□□□ -2.49
SMC1BQ8NDV3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.52□□□□□ -2.49
SMC1BQ8NDV3 MIR548V-201ENST00000584165 80 ntBASIC-0.52□□□□□ -2.49
SMC1BQ8NDV3 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.53□□□□□ -2.49
SMC1BQ8NDV3 SNORD14C-201ENST00000365382 88 ntBASIC-0.53□□□□□ -2.49
SMC1BQ8NDV3 MIR196A2-201ENST00000385189 110 ntBASIC-0.53□□□□□ -2.49
SMC1BQ8NDV3 RNU6-663P-201ENST00000391105 106 ntBASIC-0.53□□□□□ -2.49
SMC1BQ8NDV3 RNU6-523P-201ENST00000516304 54 ntBASIC-0.53□□□□□ -2.49
SMC1BQ8NDV3 MIR8068-201ENST00000618032 68 ntBASIC-0.53□□□□□ -2.49
SMC1BQ8NDV3 MIR518B-201ENST00000385127 83 ntBASIC-0.54□□□□□ -2.5
SMC1BQ8NDV3 RNU6-638P-201ENST00000516582 104 ntBASIC-0.54□□□□□ -2.5
SMC1BQ8NDV3 SNORD74.6-201ENST00000364796 70 ntBASIC-0.55□□□□□ -2.5
SMC1BQ8NDV3 RNU6-540P-201ENST00000384622 101 ntBASIC-0.55□□□□□ -2.5
SMC1BQ8NDV3 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.55□□□□□ -2.5
SMC1BQ8NDV3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.55□□□□□ -2.5
SMC1BQ8NDV3 SNORD113-2-201ENST00000391082 72 ntBASIC-0.55□□□□□ -2.5
SMC1BQ8NDV3 MIR1207-201ENST00000408249 87 ntBASIC-0.55□□□□□ -2.5
SMC1BQ8NDV3 SNORD30.1-201ENST00000391309 70 ntBASIC-0.56□□□□□ -2.5
SMC1BQ8NDV3 SNORD126-201ENST00000459475 77 ntBASIC-0.56□□□□□ -2.5
SMC1BQ8NDV3 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.57□□□□□ -2.5
SMC1BQ8NDV3 MIR4464-201ENST00000580818 92 ntBASIC-0.57□□□□□ -2.5
SMC1BQ8NDV3 AL445584.3-201ENST00000617173 78 ntBASIC-0.57□□□□□ -2.5
SMC1BQ8NDV3 U4.2-201ENST00000618561 85 ntBASIC-0.57□□□□□ -2.5
SMC1BQ8NDV3 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.58□□□□□ -2.5
SMC1BQ8NDV3 SNORD75.1-201ENST00000408373 60 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms