Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 U4.4-201ENST00000620626 117 ntBASIC0.33□□□□□ -2.36
PRPF40BQ6NWY9 MIR519A2-201ENST00000384990 87 ntBASIC0.32□□□□□ -2.36
PRPF40BQ6NWY9 AC104408.1-201ENST00000605241 170 ntBASIC0.32□□□□□ -2.36
PRPF40BQ6NWY9 MIR148A-201ENST00000362215 68 ntBASIC0.31□□□□□ -2.36
PRPF40BQ6NWY9 RNA5SP192-201ENST00000364404 120 ntBASIC0.31□□□□□ -2.36
PRPF40BQ6NWY9 RNA5SP331-201ENST00000364986 107 ntBASIC0.31□□□□□ -2.36
PRPF40BQ6NWY9 RNU7-154P-201ENST00000516194 62 ntBASIC0.31□□□□□ -2.36
PRPF40BQ6NWY9 RNU6-940P-201ENST00000363433 104 ntBASIC0.3□□□□□ -2.36
PRPF40BQ6NWY9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.3□□□□□ -2.36
PRPF40BQ6NWY9 RNA5SP25-201ENST00000410815 110 ntBASIC0.29□□□□□ -2.36
PRPF40BQ6NWY9 RNU7-159P-201ENST00000459284 62 ntBASIC0.29□□□□□ -2.36
PRPF40BQ6NWY9 Y_RNA.325-201ENST00000365171 122 ntBASIC0.28□□□□□ -2.36
PRPF40BQ6NWY9 RNU6-669P-201ENST00000365575 107 ntBASIC0.28□□□□□ -2.36
PRPF40BQ6NWY9 RNU6-1133P-201ENST00000410963 100 ntBASIC0.28□□□□□ -2.36
PRPF40BQ6NWY9 RNA5SP214-201ENST00000363378 118 ntBASIC0.27□□□□□ -2.37
PRPF40BQ6NWY9 RNU6-1246P-201ENST00000391064 107 ntBASIC0.27□□□□□ -2.37
PRPF40BQ6NWY9 MIR4743-201ENST00000584576 69 ntBASIC0.27□□□□□ -2.37
PRPF40BQ6NWY9 SNORA42.1-201ENST00000363515 137 ntBASIC0.26□□□□□ -2.37
PRPF40BQ6NWY9 MIR145-201ENST00000384967 88 ntBASIC0.26□□□□□ -2.37
PRPF40BQ6NWY9 MIR548H2-201ENST00000408874 88 ntBASIC0.26□□□□□ -2.37
PRPF40BQ6NWY9 RNU6-180P-201ENST00000516697 61 ntBASIC0.26□□□□□ -2.37
PRPF40BQ6NWY9 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
PRPF40BQ6NWY9 Y_RNA.185-201ENST00000363894 100 ntBASIC0.25□□□□□ -2.37
PRPF40BQ6NWY9 RNU6-455P-201ENST00000384681 107 ntBASIC0.25□□□□□ -2.37
PRPF40BQ6NWY9 MIR527-201ENST00000385244 85 ntBASIC0.25□□□□□ -2.37
PRPF40BQ6NWY9 AL353803.5-201ENST00000599815 141 ntBASIC0.25□□□□□ -2.37
PRPF40BQ6NWY9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.25□□□□□ -2.37
PRPF40BQ6NWY9 uc_338.36-201ENST00000622331 158 ntBASIC0.25□□□□□ -2.37
PRPF40BQ6NWY9 SNORD60.1-201ENST00000362451 73 ntBASIC0.24□□□□□ -2.37
PRPF40BQ6NWY9 SNORD114-5-201ENST00000362928 70 ntBASIC0.24□□□□□ -2.37
PRPF40BQ6NWY9 Z95118.1-201ENST00000421372 247 ntBASIC0.24□□□□□ -2.37
PRPF40BQ6NWY9 MIR466-201ENST00000580653 84 ntBASIC0.24□□□□□ -2.37
PRPF40BQ6NWY9 MIR4432-201ENST00000581823 84 ntBASIC0.24□□□□□ -2.37
PRPF40BQ6NWY9 Y_RNA.74-201ENST00000362911 99 ntBASIC0.23□□□□□ -2.37
PRPF40BQ6NWY9 RNU6-122P-201ENST00000516818 107 ntBASIC0.23□□□□□ -2.37
PRPF40BQ6NWY9 MIR429-201ENST00000362106 83 ntBASIC0.22□□□□□ -2.37
PRPF40BQ6NWY9 RNU6-758P-201ENST00000516292 89 ntBASIC0.22□□□□□ -2.37
PRPF40BQ6NWY9 AL391099.1-201ENST00000624635 187 ntBASIC0.22□□□□□ -2.37
PRPF40BQ6NWY9 RNA5SP368-201ENST00000364298 116 ntBASIC0.21□□□□□ -2.38
PRPF40BQ6NWY9 SNORD115-23-201ENST00000364461 82 ntBASIC0.21□□□□□ -2.38
PRPF40BQ6NWY9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.21□□□□□ -2.38
PRPF40BQ6NWY9 RNU6-900P-201ENST00000384498 102 ntBASIC0.2□□□□□ -2.38
PRPF40BQ6NWY9 RNU7-165P-201ENST00000458864 60 ntBASIC0.2□□□□□ -2.38
PRPF40BQ6NWY9 IGLVI-20-201ENST00000519296 130 ntBASIC0.2□□□□□ -2.38
PRPF40BQ6NWY9 SNORD114-9-201ENST00000364370 72 ntBASIC0.19□□□□□ -2.38
PRPF40BQ6NWY9 RNU6-901P-201ENST00000384593 106 ntBASIC0.19□□□□□ -2.38
PRPF40BQ6NWY9 MIR4493-201ENST00000584016 73 ntBASIC0.19□□□□□ -2.38
PRPF40BQ6NWY9 MIR6507-201ENST00000613630 70 ntBASIC0.19□□□□□ -2.38
PRPF40BQ6NWY9 RNU6-973P-201ENST00000364690 107 ntBASIC0.18□□□□□ -2.38
PRPF40BQ6NWY9 RNU7-55P-201ENST00000459426 62 ntBASIC0.18□□□□□ -2.38
PRPF40BQ6NWY9 MIR409-201ENST00000362237 79 ntBASIC0.15□□□□□ -2.39
PRPF40BQ6NWY9 SNORD114-15-201ENST00000364687 72 ntBASIC0.15□□□□□ -2.39
PRPF40BQ6NWY9 Y_RNA.282-201ENST00000364793 102 ntBASIC0.15□□□□□ -2.39
PRPF40BQ6NWY9 SNORD116-16-201ENST00000384533 92 ntBASIC0.15□□□□□ -2.39
PRPF40BQ6NWY9 SNORA41B-201ENST00000384785 128 ntBASIC0.15□□□□□ -2.39
PRPF40BQ6NWY9 AP001180.6-201ENST00000584918 159 ntBASIC0.15□□□□□ -2.39
PRPF40BQ6NWY9 SNORD114-31-201ENST00000363219 75 ntBASIC0.14□□□□□ -2.39
PRPF40BQ6NWY9 SNORA62.4-201ENST00000365504 151 ntBASIC0.14□□□□□ -2.39
PRPF40BQ6NWY9 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
PRPF40BQ6NWY9 AC244250.2-201ENST00000418731 148 ntBASIC0.14□□□□□ -2.39
PRPF40BQ6NWY9 RNU6-1079P-201ENST00000362861 110 ntBASIC0.13□□□□□ -2.39
PRPF40BQ6NWY9 RNU6-929P-201ENST00000384429 107 ntBASIC0.13□□□□□ -2.39
PRPF40BQ6NWY9 MIR633-201ENST00000384821 98 ntBASIC0.13□□□□□ -2.39
PRPF40BQ6NWY9 MIR4768-201ENST00000585270 74 ntBASIC0.13□□□□□ -2.39
PRPF40BQ6NWY9 Y_RNA.236-201ENST00000364427 111 ntBASIC0.12□□□□□ -2.39
PRPF40BQ6NWY9 RNU6-499P-201ENST00000365615 107 ntBASIC0.12□□□□□ -2.39
PRPF40BQ6NWY9 MIR3938-201ENST00000582157 103 ntBASIC0.12□□□□□ -2.39
PRPF40BQ6NWY9 AC108676.2-201ENST00000605225 163 ntBASIC0.12□□□□□ -2.39
PRPF40BQ6NWY9 MIR371B-201ENST00000638082 66 ntBASIC0.12□□□□□ -2.39
PRPF40BQ6NWY9 RNU6-458P-201ENST00000384179 107 ntBASIC0.11□□□□□ -2.39
PRPF40BQ6NWY9 MIR548AG1-201ENST00000579932 66 ntBASIC0.11□□□□□ -2.39
PRPF40BQ6NWY9 U6.58-201ENST00000613107 107 ntBASIC0.11□□□□□ -2.39
PRPF40BQ6NWY9 RNU6-46P-201ENST00000383860 107 ntBASIC0.1□□□□□ -2.39
PRPF40BQ6NWY9 RNU6-1184P-201ENST00000384588 108 ntBASIC0.1□□□□□ -2.39
PRPF40BQ6NWY9 RNU6-246P-201ENST00000384702 107 ntBASIC0.1□□□□□ -2.39
PRPF40BQ6NWY9 MIR604-201ENST00000384880 94 ntBASIC0.1□□□□□ -2.39
PRPF40BQ6NWY9 AC096531.1-201ENST00000419107 107 ntBASIC0.09□□□□□ -2.4
PRPF40BQ6NWY9 SNORD95.1-201ENST00000364099 68 ntBASIC0.08□□□□□ -2.4
PRPF40BQ6NWY9 SNORD49B-201ENST00000365172 72 ntBASIC0.08□□□□□ -2.4
PRPF40BQ6NWY9 AL445193.1-201ENST00000441183 141 ntBASIC0.07□□□□□ -2.4
PRPF40BQ6NWY9 AC104692.1-201ENST00000472406 90 ntBASIC0.07□□□□□ -2.4
PRPF40BQ6NWY9 Y_RNA.109-201ENST00000363215 102 ntBASIC0.06□□□□□ -2.4
PRPF40BQ6NWY9 MIR5704-201ENST00000584029 77 ntBASIC0.06□□□□□ -2.4
PRPF40BQ6NWY9 MIR4667-201ENST00000578933 66 ntBASIC0.05□□□□□ -2.4
PRPF40BQ6NWY9 RNA5SP266-201ENST00000410273 108 ntBASIC0.04□□□□□ -2.4
PRPF40BQ6NWY9 MIR6854-201ENST00000614935 69 ntBASIC0.04□□□□□ -2.4
PRPF40BQ6NWY9 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
PRPF40BQ6NWY9 SNORD56B-201ENST00000384713 71 ntBASIC0.03□□□□□ -2.4
PRPF40BQ6NWY9 RNU7-119P-201ENST00000459279 63 ntBASIC0.03□□□□□ -2.4
PRPF40BQ6NWY9 MIR4290-201ENST00000583807 95 ntBASIC0.03□□□□□ -2.4
PRPF40BQ6NWY9 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.03□□□□□ -2.4
PRPF40BQ6NWY9 MIR101-1-201ENST00000362265 75 ntBASIC0.02□□□□□ -2.41
PRPF40BQ6NWY9 RNA5SP67-201ENST00000516422 131 ntBASIC0.02□□□□□ -2.41
PRPF40BQ6NWY9 MIR6888-201ENST00000621977 67 ntBASIC0.02□□□□□ -2.41
PRPF40BQ6NWY9 AC079150.2-201ENST00000443733 78 ntBASIC0.01□□□□□ -2.41
PRPF40BQ6NWY9 RNU6-231P-201ENST00000517122 103 ntBASIC0.01□□□□□ -2.41
PRPF40BQ6NWY9 AL445584.3-201ENST00000617173 78 ntBASIC0.01□□□□□ -2.41
PRPF40BQ6NWY9 MIR4464-201ENST00000580818 92 ntBASIC0□□□□□ -2.41
PRPF40BQ6NWY9 SNORD114-12-201ENST00000365400 75 ntBASIC-0.01□□□□□ -2.41
PRPF40BQ6NWY9 RNU6-520P-201ENST00000384717 104 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms