Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNU4-40P-201ENST00000364351 143 ntBASIC-6.05□□□□□ -3.38
TFF3Q07654 RNU4-85P-201ENST00000364675 123 ntBASIC-6.05□□□□□ -3.38
TFF3Q07654 RNU6-1241P-201ENST00000384536 107 ntBASIC-6.05□□□□□ -3.38
TFF3Q07654 RN7SKP298-201ENST00000515950 94 ntBASIC-6.05□□□□□ -3.38
TFF3Q07654 MIR5690-201ENST00000583739 73 ntBASIC-6.05□□□□□ -3.38
TFF3Q07654 Y_RNA.16-201ENST00000362421 102 ntBASIC-6.06□□□□□ -3.38
TFF3Q07654 Y_RNA.206-201ENST00000364136 102 ntBASIC-6.06□□□□□ -3.38
TFF3Q07654 SNORD116.2-201ENST00000391251 93 ntBASIC-6.06□□□□□ -3.38
TFF3Q07654 AL160413.1-201ENST00000622780 310 ntBASIC-6.06□□□□□ -3.38
TFF3Q07654 SNORA63.7-201ENST00000365579 123 ntBASIC-6.08□□□□□ -3.38
TFF3Q07654 SNORA26.8-201ENST00000391306 124 ntBASIC-6.08□□□□□ -3.38
TFF3Q07654 Y_RNA.96-201ENST00000363092 109 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 Y_RNA.335-201ENST00000365299 96 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 RNU6-493P-201ENST00000391321 108 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 MIR4509-3-201ENST00000578671 94 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 MIR4509-2-201ENST00000583920 94 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 AC015540.1-201ENST00000615828 501 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 MIR4509-1-201ENST00000618224 94 ntBASIC-6.09□□□□□ -3.38
TFF3Q07654 RNU6-795P-201ENST00000516323 103 ntBASIC-6.1□□□□□ -3.39
TFF3Q07654 RNU6-624P-201ENST00000363411 107 ntBASIC-6.11□□□□□ -3.39
TFF3Q07654 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-6.11□□□□□ -3.39
TFF3Q07654 RNU6-232P-201ENST00000517144 64 ntBASIC-6.11□□□□□ -3.39
TFF3Q07654 MIR4679-2-201ENST00000578358 77 ntBASIC-6.11□□□□□ -3.39
TFF3Q07654 RNU6-92P-201ENST00000605893 104 ntBASIC-6.11□□□□□ -3.39
TFF3Q07654 MIR3915-201ENST00000578518 97 ntBASIC-6.12□□□□□ -3.39
TFF3Q07654 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-6.12□□□□□ -3.39
TFF3Q07654 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-6.12□□□□□ -3.39
TFF3Q07654 RNU6-510P-201ENST00000391239 108 ntBASIC-6.13□□□□□ -3.39
TFF3Q07654 RNU6-836P-201ENST00000362920 107 ntBASIC-6.14□□□□□ -3.39
TFF3Q07654 MTATP6P25-201ENST00000574491 261 ntBASIC-6.14□□□□□ -3.39
TFF3Q07654 Y_RNA.218-201ENST00000364218 104 ntBASIC-6.15□□□□□ -3.39
TFF3Q07654 Y_RNA.496-201ENST00000384444 101 ntBASIC-6.15□□□□□ -3.39
TFF3Q07654 MIR519C-201ENST00000385053 87 ntBASIC-6.15□□□□□ -3.39
TFF3Q07654 RNU6-780P-201ENST00000391030 104 ntBASIC-6.16□□□□□ -3.4
TFF3Q07654 RNU4-14P-201ENST00000410858 122 ntBASIC-6.16□□□□□ -3.4
TFF3Q07654 SCARNA23-201ENST00000516060 130 ntBASIC-6.17□□□□□ -3.4
TFF3Q07654 RNU6-557P-201ENST00000516842 110 ntBASIC-6.17□□□□□ -3.4
TFF3Q07654 SNORA40.16-201ENST00000517238 121 ntBASIC-6.17□□□□□ -3.4
TFF3Q07654 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-6.17□□□□□ -3.4
TFF3Q07654 AC078883.4-201ENST00000623218 367 ntBASIC-6.17□□□□□ -3.4
TFF3Q07654 Y_RNA.29-201ENST00000362570 113 ntBASIC-6.18□□□□□ -3.4
TFF3Q07654 SNORA63.4-201ENST00000362763 126 ntBASIC-6.18□□□□□ -3.4
TFF3Q07654 RNU6-422P-201ENST00000384632 107 ntBASIC-6.19□□□□□ -3.4
TFF3Q07654 RNU6-876P-201ENST00000391295 104 ntBASIC-6.19□□□□□ -3.4
TFF3Q07654 RNU2-72P-201ENST00000411175 163 ntBASIC-6.19□□□□□ -3.4
TFF3Q07654 SNORD60.1-201ENST00000362451 73 ntBASIC-6.21□□□□□ -3.4
TFF3Q07654 RNU6-788P-201ENST00000390967 104 ntBASIC-6.21□□□□□ -3.4
TFF3Q07654 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-6.22□□□□□ -3.41
TFF3Q07654 Y_RNA.635-201ENST00000459041 101 ntBASIC-6.22□□□□□ -3.41
TFF3Q07654 U2.14-201ENST00000615943 113 ntBASIC-6.22□□□□□ -3.41
TFF3Q07654 AL035470.1-201ENST00000622571 220 ntBASIC-6.22□□□□□ -3.41
TFF3Q07654 Y_RNA.165-201ENST00000363721 102 ntBASIC-6.23□□□□□ -3.41
TFF3Q07654 SNORD37.2-201ENST00000391075 66 ntBASIC-6.23□□□□□ -3.41
TFF3Q07654 RNU7-125P-201ENST00000458760 62 ntBASIC-6.23□□□□□ -3.41
TFF3Q07654 RNU6-196P-201ENST00000384315 107 ntBASIC-6.24□□□□□ -3.41
TFF3Q07654 RNU5A-2P-201ENST00000384337 116 ntBASIC-6.24□□□□□ -3.41
TFF3Q07654 Y_RNA.661-201ENST00000516003 99 ntBASIC-6.24□□□□□ -3.41
TFF3Q07654 RNY3P15-201ENST00000516297 97 ntBASIC-6.24□□□□□ -3.41
TFF3Q07654 MIR5009-201ENST00000578736 100 ntBASIC-6.25□□□□□ -3.41
TFF3Q07654 MIR548AI-201ENST00000579940 88 ntBASIC-6.25□□□□□ -3.41
TFF3Q07654 Y_RNA.202-201ENST00000364083 110 ntBASIC-6.26□□□□□ -3.41
TFF3Q07654 SNORD45A-201ENST00000384512 84 ntBASIC-6.26□□□□□ -3.41
TFF3Q07654 RNY3P16-201ENST00000516338 101 ntBASIC-6.26□□□□□ -3.41
TFF3Q07654 U6.104-201ENST00000637979 90 ntBASIC-6.26□□□□□ -3.41
TFF3Q07654 RNU6-419P-201ENST00000517030 63 ntBASIC-6.27□□□□□ -3.41
TFF3Q07654 MIR1297-201ENST00000637311 77 ntBASIC-6.27□□□□□ -3.41
TFF3Q07654 RNU6-542P-201ENST00000516405 103 ntBASIC-6.28□□□□□ -3.41
TFF3Q07654 Y_RNA.84-201ENST00000363011 104 ntBASIC-6.29□□□□□ -3.42
TFF3Q07654 RNU6-686P-201ENST00000364839 107 ntBASIC-6.29□□□□□ -3.42
TFF3Q07654 MIR1302-11-201ENST00000408051 138 ntBASIC-6.29□□□□□ -3.42
TFF3Q07654 MIR1302-9-201ENST00000408365 138 ntBASIC-6.29□□□□□ -3.42
TFF3Q07654 MIR1302-10-201ENST00000408734 138 ntBASIC-6.29□□□□□ -3.42
TFF3Q07654 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-6.29□□□□□ -3.42
TFF3Q07654 MIR1302-2-201ENST00000607096 138 ntBASIC-6.29□□□□□ -3.42
TFF3Q07654 Y_RNA.532-201ENST00000384590 113 ntBASIC-6.3□□□□□ -3.42
TFF3Q07654 RNU7-119P-201ENST00000459279 63 ntBASIC-6.3□□□□□ -3.42
TFF3Q07654 Y_RNA.252-201ENST00000364556 101 ntBASIC-6.31□□□□□ -3.42
TFF3Q07654 RNU6-806P-201ENST00000365147 105 ntBASIC-6.31□□□□□ -3.42
TFF3Q07654 SNORD115.2-201ENST00000391126 59 ntBASIC-6.31□□□□□ -3.42
TFF3Q07654 RNU6-1325P-201ENST00000364905 105 ntBASIC-6.32□□□□□ -3.42
TFF3Q07654 RNU6-915P-201ENST00000364943 103 ntBASIC-6.32□□□□□ -3.42
TFF3Q07654 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-6.32□□□□□ -3.42
TFF3Q07654 SNORA40.15-201ENST00000516884 107 ntBASIC-6.34□□□□□ -3.42
TFF3Q07654 Y_RNA.544-201ENST00000384650 113 ntBASIC-6.35□□□□□ -3.43
TFF3Q07654 AL158147.1-201ENST00000443970 75 ntBASIC-6.35□□□□□ -3.43
TFF3Q07654 DNAJC19P2-201ENST00000593340 302 ntBASIC-6.35□□□□□ -3.43
TFF3Q07654 MIR4317-201ENST00000637586 65 ntBASIC-6.35□□□□□ -3.43
TFF3Q07654 RNU7-121P-201ENST00000516604 62 ntBASIC-6.36□□□□□ -3.43
TFF3Q07654 AP001318.4-201ENST00000616637 121 ntBASIC-6.36□□□□□ -3.43
TFF3Q07654 MIRLET7A1-201ENST00000362295 80 ntBASIC-6.37□□□□□ -3.43
TFF3Q07654 Y_RNA.292-201ENST00000364904 97 ntBASIC-6.37□□□□□ -3.43
TFF3Q07654 RNU6-162P-201ENST00000516228 103 ntBASIC-6.37□□□□□ -3.43
TFF3Q07654 RNU6-267P-201ENST00000516714 103 ntBASIC-6.37□□□□□ -3.43
TFF3Q07654 MTATP8P2-201ENST00000435212 202 ntBASIC-6.38□□□□□ -3.43
TFF3Q07654 AC109635.3-201ENST00000529536 185 ntBASIC-6.38□□□□□ -3.43
TFF3Q07654 SNORD116-24-201ENST00000384549 92 ntBASIC-6.39□□□□□ -3.43
TFF3Q07654 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-6.39□□□□□ -3.43
TFF3Q07654 SNORD127-201ENST00000458892 86 ntBASIC-6.39□□□□□ -3.43
TFF3Q07654 RNU6-239P-201ENST00000390990 99 ntBASIC-6.4□□□□□ -3.43
TFF3Q07654 RNU6-1043P-201ENST00000410355 99 ntBASIC-6.41□□□□□ -3.44
Retrieved 100 of 98,524 protein–RNA pairs in 249.5 ms