Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 SNORD116-16-201ENST00000384533 92 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 SNORA19-201ENST00000384737 128 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
COL7A1Q02388 AC097484.2-201ENST00000509147 251 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 MIR4679-2-201ENST00000578358 77 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 MIR4439-201ENST00000583746 80 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 MIR2052-201ENST00000636055 55 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 U6.97-201ENST00000636904 101 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 U6.104-201ENST00000637979 90 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 SNORD18C-201ENST00000362704 69 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 RNU6-1044P-201ENST00000384755 107 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 RNY4P25-201ENST00000459254 96 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 MIR548V-201ENST00000584165 80 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 AL353621.2-201ENST00000605340 133 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 MIR8053-201ENST00000613344 75 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 AC013734.1-201ENST00000619329 111 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 RNU6-669P-201ENST00000365575 107 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 SNORD116-4-201ENST00000384733 96 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 SNORA81.3-201ENST00000517283 198 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 AC026407.1-201ENST00000518369 204 ntBASIC-0.55□□□□□ -2.5
COL7A1Q02388 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 RNU6-361P-201ENST00000364454 107 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 RNU6-639P-201ENST00000384074 107 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 MIR125B1-201ENST00000385236 88 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 RNU6-604P-201ENST00000390917 100 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 SNORD33.1-201ENST00000516213 88 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 RNU6-861P-201ENST00000516745 106 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 AC006160.2-201ENST00000637708 154 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 RNY1P1-201ENST00000364372 112 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 SNORD114-13-201ENST00000364377 74 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 MIR548H4-201ENST00000408689 111 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 MIR3171-201ENST00000584270 74 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 AC139792.2-201ENST00000624218 587 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 AP001340.1-201ENST00000624405 217 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 MIR4426-201ENST00000640330 63 ntBASIC-0.56□□□□□ -2.5
COL7A1Q02388 RNU6-755P-201ENST00000364400 103 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 RNU6-737P-201ENST00000365370 107 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 RNU6-800P-201ENST00000384473 103 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 MIR1263-201ENST00000408324 86 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 AL450471.1-201ENST00000447509 127 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 SNORD113-3-201ENST00000364830 72 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 SNORD45A-201ENST00000384512 84 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 RNU6-713P-201ENST00000384761 107 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 RNU6-644P-201ENST00000391155 98 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 RNU6-795P-201ENST00000516323 103 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.57□□□□□ -2.5
COL7A1Q02388 RNU6-474P-201ENST00000384243 107 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 SCARNA23-201ENST00000516060 130 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 MIR4668-201ENST00000582284 70 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.58□□□□□ -2.5
COL7A1Q02388 MIR3675-201ENST00000583661 73 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 MIR429-201ENST00000362106 83 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 RNU6-326P-201ENST00000365480 107 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 RNU6-415P-201ENST00000516252 97 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 RNU6-70P-201ENST00000516438 60 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 MIR369-201ENST00000362155 70 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 RNU6-810P-201ENST00000364001 107 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 RNU4-40P-201ENST00000364351 143 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 RNU6-813P-201ENST00000384691 107 ntBASIC-0.58□□□□□ -2.5
COL7A1Q02388 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 SNORA27.2-201ENST00000363365 126 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 RNU6-598P-201ENST00000364017 105 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 MIR154-201ENST00000385243 84 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 RNU6-587P-201ENST00000391282 106 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms