Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 MIR6739-201ENST00000622461 75 ntBASIC-1.46□□□□□ -2.64
TNFRSF17Q02223 MIR664B-201ENST00000626756 61 ntBASIC-1.46□□□□□ -2.64
TNFRSF17Q02223 RNU6-681P-201ENST00000364012 104 ntBASIC-1.47□□□□□ -2.64
TNFRSF17Q02223 RNU6-746P-201ENST00000384112 109 ntBASIC-1.47□□□□□ -2.64
TNFRSF17Q02223 MIR519C-201ENST00000385053 87 ntBASIC-1.47□□□□□ -2.64
TNFRSF17Q02223 SNORD77.2-201ENST00000391045 68 ntBASIC-1.47□□□□□ -2.64
TNFRSF17Q02223 SNORD63.1-201ENST00000516178 80 ntBASIC-1.47□□□□□ -2.64
TNFRSF17Q02223 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.47□□□□□ -2.64
TNFRSF17Q02223 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
TNFRSF17Q02223 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.48□□□□□ -2.65
TNFRSF17Q02223 MIR487B-201ENST00000385021 84 ntBASIC-1.48□□□□□ -2.65
TNFRSF17Q02223 MIR527-201ENST00000385244 85 ntBASIC-1.48□□□□□ -2.65
TNFRSF17Q02223 SNORA26.4-201ENST00000391188 123 ntBASIC-1.48□□□□□ -2.65
TNFRSF17Q02223 AL035461.1-201ENST00000421490 332 ntBASIC-1.48□□□□□ -2.65
TNFRSF17Q02223 AC008267.6-201ENST00000441664 139 ntBASIC-1.48□□□□□ -2.65
TNFRSF17Q02223 AC108019.1-201ENST00000512540 175 ntBASIC-1.48□□□□□ -2.65
TNFRSF17Q02223 AL021921.1-201ENST00000442774 93 ntBASIC-1.49□□□□□ -2.65
TNFRSF17Q02223 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.49□□□□□ -2.65
TNFRSF17Q02223 RNU6-959P-201ENST00000384671 107 ntBASIC-1.5□□□□□ -2.65
TNFRSF17Q02223 MIR548C-201ENST00000384815 97 ntBASIC-1.5□□□□□ -2.65
TNFRSF17Q02223 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.5□□□□□ -2.65
TNFRSF17Q02223 AL365222.1-201ENST00000614661 98 ntBASIC-1.5□□□□□ -2.65
TNFRSF17Q02223 SNORD115-33-201ENST00000363723 82 ntBASIC-1.51□□□□□ -2.65
TNFRSF17Q02223 SNORD115-37-201ENST00000363768 82 ntBASIC-1.51□□□□□ -2.65
TNFRSF17Q02223 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.51□□□□□ -2.65
TNFRSF17Q02223 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.51□□□□□ -2.65
TNFRSF17Q02223 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.51□□□□□ -2.65
TNFRSF17Q02223 MIR507-201ENST00000385234 94 ntBASIC-1.51□□□□□ -2.65
TNFRSF17Q02223 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.52□□□□□ -2.65
TNFRSF17Q02223 RNU7-88P-201ENST00000458752 63 ntBASIC-1.53□□□□□ -2.65
TNFRSF17Q02223 RNU6-766P-201ENST00000362478 107 ntBASIC-1.54□□□□□ -2.66
TNFRSF17Q02223 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.54□□□□□ -2.66
TNFRSF17Q02223 RNU4-61P-201ENST00000411243 107 ntBASIC-1.54□□□□□ -2.66
TNFRSF17Q02223 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.54□□□□□ -2.66
TNFRSF17Q02223 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.54□□□□□ -2.66
TNFRSF17Q02223 RNA5SP405-201ENST00000363059 114 ntBASIC-1.55□□□□□ -2.66
TNFRSF17Q02223 SNORD115-22-201ENST00000364456 82 ntBASIC-1.55□□□□□ -2.66
TNFRSF17Q02223 AL078595.1-201ENST00000404458 226 ntBASIC-1.55□□□□□ -2.66
TNFRSF17Q02223 AL353691.2-201ENST00000443795 59 ntBASIC-1.55□□□□□ -2.66
TNFRSF17Q02223 RNU6-656P-201ENST00000516785 107 ntBASIC-1.55□□□□□ -2.66
TNFRSF17Q02223 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.56□□□□□ -2.66
TNFRSF17Q02223 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.56□□□□□ -2.66
TNFRSF17Q02223 MTATP8P2-201ENST00000435212 202 ntBASIC-1.56□□□□□ -2.66
TNFRSF17Q02223 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.56□□□□□ -2.66
TNFRSF17Q02223 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.57□□□□□ -2.66
TNFRSF17Q02223 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.57□□□□□ -2.66
TNFRSF17Q02223 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
TNFRSF17Q02223 MIR4668-201ENST00000582284 70 ntBASIC-1.57□□□□□ -2.66
TNFRSF17Q02223 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.58□□□□□ -2.66
TNFRSF17Q02223 MIR548AG1-201ENST00000579932 66 ntBASIC-1.58□□□□□ -2.66
TNFRSF17Q02223 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.58□□□□□ -2.66
TNFRSF17Q02223 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.58□□□□□ -2.66
TNFRSF17Q02223 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.58□□□□□ -2.66
TNFRSF17Q02223 RNU6-645P-201ENST00000364649 106 ntBASIC-1.59□□□□□ -2.66
TNFRSF17Q02223 RNU6-589P-201ENST00000516485 107 ntBASIC-1.59□□□□□ -2.66
TNFRSF17Q02223 U7.5-201ENST00000517224 61 ntBASIC-1.59□□□□□ -2.66
TNFRSF17Q02223 U2.7-201ENST00000619197 100 ntBASIC-1.59□□□□□ -2.66
TNFRSF17Q02223 MIR450A1-201ENST00000362262 91 ntBASIC-1.6□□□□□ -2.67
TNFRSF17Q02223 RNU6-633P-201ENST00000362612 103 ntBASIC-1.6□□□□□ -2.67
TNFRSF17Q02223 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.6□□□□□ -2.67
TNFRSF17Q02223 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.6□□□□□ -2.67
TNFRSF17Q02223 MIR3668-201ENST00000582138 75 ntBASIC-1.6□□□□□ -2.67
TNFRSF17Q02223 RNU2-51P-201ENST00000410708 197 ntBASIC-1.61□□□□□ -2.67
TNFRSF17Q02223 RNU6-576P-201ENST00000390854 102 ntBASIC-1.62□□□□□ -2.67
TNFRSF17Q02223 AL031737.1-201ENST00000450125 223 ntBASIC-1.62□□□□□ -2.67
TNFRSF17Q02223 AC093729.1-201ENST00000513074 128 ntBASIC-1.62□□□□□ -2.67
TNFRSF17Q02223 RNU6-807P-201ENST00000516805 107 ntBASIC-1.62□□□□□ -2.67
TNFRSF17Q02223 MIR6818-201ENST00000621576 65 ntBASIC-1.62□□□□□ -2.67
TNFRSF17Q02223 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.62□□□□□ -2.67
TNFRSF17Q02223 MIR2052-201ENST00000636055 55 ntBASIC-1.62□□□□□ -2.67
TNFRSF17Q02223 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.64□□□□□ -2.67
TNFRSF17Q02223 RNU6-246P-201ENST00000384702 107 ntBASIC-1.64□□□□□ -2.67
TNFRSF17Q02223 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.65□□□□□ -2.67
TNFRSF17Q02223 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.65□□□□□ -2.67
TNFRSF17Q02223 MIR4490-201ENST00000582647 84 ntBASIC-1.65□□□□□ -2.67
TNFRSF17Q02223 MIR6874-201ENST00000635894 71 ntBASIC-1.65□□□□□ -2.67
TNFRSF17Q02223 RNU6-330P-201ENST00000363015 107 ntBASIC-1.66□□□□□ -2.68
TNFRSF17Q02223 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.66□□□□□ -2.68
TNFRSF17Q02223 RNU6-81P-201ENST00000365608 104 ntBASIC-1.66□□□□□ -2.68
TNFRSF17Q02223 SNORA8.1-201ENST00000384250 140 ntBASIC-1.66□□□□□ -2.68
TNFRSF17Q02223 SNORD116-22-201ENST00000384430 92 ntBASIC-1.66□□□□□ -2.68
TNFRSF17Q02223 MIR29B1-201ENST00000385015 81 ntBASIC-1.66□□□□□ -2.68
TNFRSF17Q02223 MIR548Q-201ENST00000408404 100 ntBASIC-1.66□□□□□ -2.68
TNFRSF17Q02223 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.66□□□□□ -2.68
TNFRSF17Q02223 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.66□□□□□ -2.68
TNFRSF17Q02223 MIR5683-201ENST00000636514 76 ntBASIC-1.66□□□□□ -2.68
TNFRSF17Q02223 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.67□□□□□ -2.68
TNFRSF17Q02223 RNU6-402P-201ENST00000410678 103 ntBASIC-1.67□□□□□ -2.68
TNFRSF17Q02223 RNU6-194P-201ENST00000363862 105 ntBASIC-1.68□□□□□ -2.68
TNFRSF17Q02223 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.68□□□□□ -2.68
TNFRSF17Q02223 RNU6-22P-201ENST00000384355 107 ntBASIC-1.68□□□□□ -2.68
TNFRSF17Q02223 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.68□□□□□ -2.68
TNFRSF17Q02223 RNU6-604P-201ENST00000390917 100 ntBASIC-1.68□□□□□ -2.68
TNFRSF17Q02223 MIR3671-201ENST00000580455 88 ntBASIC-1.68□□□□□ -2.68
TNFRSF17Q02223 MIR3675-201ENST00000583661 73 ntBASIC-1.68□□□□□ -2.68
TNFRSF17Q02223 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.68□□□□□ -2.68
TNFRSF17Q02223 RNU6-834P-201ENST00000362367 110 ntBASIC-1.69□□□□□ -2.68
TNFRSF17Q02223 RNU6-624P-201ENST00000363411 107 ntBASIC-1.69□□□□□ -2.68
TNFRSF17Q02223 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.69□□□□□ -2.68
TNFRSF17Q02223 SNORD19-201ENST00000391191 68 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms